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Conferences in DBLP

2007 (conf/isbra/2007)

  1. Xubo Fei, Shiyong Lu, Horia F. Pop, Lily R. Liang
    GFBA: A Biclustering Algorithm for Discovering Value-Coherent Biclusters. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:1-12 [Conf]
  2. Fang-Xiang Wu
    Significance Analysis of Time-Course Gene Expression Profiles. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:13-24 [Conf]
  3. Juntao Li, Jianhua Liu, Karuturi R. Krishna Murthy
    Data-Driven Smoothness Enhanced Variance Ratio Test to Unearth Responsive Genes in 0-Time Normalized Time-Course Microarray Data. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:25-36 [Conf]
  4. Srinath Sridhar, Fumei Lam, Guy E. Blelloch, R. Ravi, Russell Schwartz
    Efficiently Finding the Most Parsimonious Phylogenetic Tree Via Linear Programming. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:37-48 [Conf]
  5. Róbert Busa-Fekete, András Kocsor, Csaba Bagyinka
    A Multi-Stack Based Phylogenetic Tree Building Method. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:49-60 [Conf]
  6. Guohua Jin, Luay Nakhleh, Sagi Snir, Tamir Tuller
    A New Linear-Time Heuristic Algorithm for Computing the Parsimony Score of Phylogenetic Networks: Theoretical Bounds and Empirical Performance. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:61-72 [Conf]
  7. Qihua Tan, Jesper Dahlgaard, Basem M. Abdallah, Werner Vach, Moustapha Kassem, Torben A. Kruse
    A Bootstrap Correspondence Analysis for Factorial Microarray Experiments with Replications. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:73-84 [Conf]
  8. Roy Varshavsky, David Horn, Michal Linial
    Clustering Algorithms Optimizer: A Framework for Large Datasets. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:85-96 [Conf]
  9. Jahangheer Shaik, Mohammed Yeasin
    Ranking Function Based on Higher Order Statistics (RF-HOS) for Two-Sample Microarray Experiments. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:97-108 [Conf]
  10. Patricia Buendia, Giri Narasimhan
    Searching for Recombinant Donors in a Phylogenetic Network of Serial Samples. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:109-120 [Conf]
  11. Arvind Gupta, Ján Manuch, Ladislav Stacho, Xiaohong Zhao
    Algorithm for Haplotype Inferring Via Galled-Tree Networks with Simple Galls. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:121-132 [Conf]
  12. Frederick Cohan, Danny Krizanc, Yun Lu
    Estimating Bacterial Diversity from Environmental DNA: A Maximum Likelihood Approach. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:133-144 [Conf]
  13. Ming Li
    Invited Talk: Modern Homology Search. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:145- [Conf]
  14. Pramod K. Gupta, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Satoru Miyano
    Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:146-157 [Conf]
  15. Italo Zoppis, Daniele Merico, Marco Antoniotti, Bud Mishra, Giancarlo Mauri
    Discovering Relations Among GO-Annotated Clusters by Graph Kernel Methods. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:158-169 [Conf]
  16. George Lee, Carlos Rodriguez, Anant Madabhushi
    An Empirical Comparison of Dimensionality Reduction Methods for Classifying Gene and Protein Expression Datasets. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:170-181 [Conf]
  17. Robert J. Calin-Jageman, Chao Xie, Yi Pan, Art Vandenberg, Paul S. Katz
    NEURONgrid: A Toolkit for Generating Parameter-Space Maps Using NEURON in a Grid Environment. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:182-191 [Conf]
  18. Leonid Zaslavsky, Yiming Bao, Tatiana A. Tatusova
    An Adaptive Resolution Tree Visualization of Large Influenza Virus Sequence Datasets. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:192-202 [Conf]
  19. Gordana Derado, F. DuBois Bowman, Rajan Patel, Mary Newell, Brani Vidakovic
    Wavelet Image Interpolation (WII): A Wavelet-Based Approach to Enhancement of Digital Mammography Images. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:203-214 [Conf]
  20. Yanchao Wang, Rajshekhar Sunderraman, Piyaphol Phoungphol
    High Level Programming Environment System for Protein Structure Data. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:215-226 [Conf]
  21. Kung-Hua Chang, Yong Kyun Kwon, Douglas Stott Parker Jr.
    Finding Minimal Sets of Informative Genes in Microarray Data. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:227-236 [Conf]
  22. Li Chen, Dmitry B. Goldgof, Lawrence O. Hall, Steven Eschrich
    Noise-Based Feature Perturbation as a Selection Method for Microarray Data. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:237-247 [Conf]
  23. Igor Trajkovski, Nada Lavrac
    Efficient Generation of Biologically Relevant Enriched Gene Sets. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:248-259 [Conf]
  24. Sudha Balla, Sanguthevar Rajasekaran
    Space and Time Efficient Algorithms to Discover Endogenous RNAi Patterns in Complete Genome Data. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:260-269 [Conf]
  25. Scott F. Smith
    A Fast Approximate Covariance-Model-Based Database Search Method for Non-coding RNA. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:270-281 [Conf]
  26. Raja Loganantharaj
    Extensions of Naive Bayes and Their Applications to Bioinformatics. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:282-292 [Conf]
  27. Marília D. V. Braga, Marie-France Sagot, Celine Scornavacca, Eric Tannier
    The Solution Space of Sorting by Reversals. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:293-304 [Conf]
  28. Matthias Bernt, Daniel Merkle, Martin Middendorf
    A Fast and Exact Algorithm for the Perfect Reversal Median Problem. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:305-316 [Conf]
  29. Lenwood S. Heath, Amrita Pati
    Genomic Signatures from DNA Word Graphs. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:317-328 [Conf]
  30. Erliang Zeng, Giri Narasimhan
    Enhancing Motif Refinement by Incorporating Comparative Genomics Data. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:329-337 [Conf]
  31. Hyunmin Kim, Katherina J. Kechris, Lawrence Hunter
    Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:338-349 [Conf]
  32. Allison N. Tegge, Sandra L. Rodriguez-Zas, Jonathan V. Sweedler, Bruce R. Southey
    Enhanced Prediction of Cleavage in Bovine Precursor Sequences. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:350-360 [Conf]
  33. Mary Qu Yang, Laura Elnitski
    Invited Talk: A Computational Study of Bidirectional Promoters in the Human Genome. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:361-371 [Conf]
  34. Mark J. Lawson, Liqing Zhang
    The Identification of Antisense Gene Pairs Through Available Software. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:372-381 [Conf]
  35. Steinar Thorvaldsen, Elinor Ytterstad, Tor Flå
    Inferring Weak Adaptations and Selection Biases in Proteins from Composition and Substitution Matrices. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:382-393 [Conf]
  36. Michael E. Sparks, Volker Brendel, Karin S. Dorman
    Markov Model Variants for Appraisal of Coding Potential in Plant DNA. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:394-405 [Conf]
  37. Zheng Rong Yang
    Predicting Palmitoylation Sites Using a Regularised Bio-basis Function Neural Network. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:406-417 [Conf]
  38. Hao Yu, Minlie Huang, Xiaoyan Zhu, Yabin Guo
    A Novel Kernel-Based Approach for Predicting Binding Peptides for HLA Class II Molecules. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:418-429 [Conf]
  39. Margaret Dah-Tsyr Chang, Hao-Teng Chang, Rong-Yuan Huang, Wen-Shyong Tzou, Chih-Hong Liu, Wei-Jun Zhung, Hsien-Wei Wang, Chun-Tien Chang, Tun-Wen Pai
    A Database for Prediction of Unique Peptide Motifs as Linear Epitopes. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:430-440 [Conf]
  40. Dan He
    A Novel Greedy Algorithm for the Minimum Common String Partition Problem. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:441-452 [Conf]
  41. Mun-Ho Choi, In-Seon Jeong, Seung-Ho Kang, Hyeong-Seok Lim
    An Efficient Algorithm for Finding Gene-Specific Probes for DNA Microarrays. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:453-464 [Conf]
  42. Chengpeng Bi
    Multiple Sequence Local Alignment Using Monte Carlo EM Algorithm. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:465-476 [Conf]
  43. Hyunsoo Kim, Haesun Park
    Cancer Class Discovery Using Non-negative Matrix Factorization Based on Alternating Non-negativity-Constrained Least Squares. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:477-487 [Conf]
  44. Chen Liao, Shutao Li
    A Support Vector Machine Ensemble for Cancer Classification Using Gene Expression Data. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:488-495 [Conf]
  45. Xiujuan Chen, Yichuan Zhao, Yan-Qing Zhang, Robert Harrison
    Combining SVM Classifiers Using Genetic Fuzzy Systems Based on AUC for Gene Expression Data Analysis. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:496-505 [Conf]
  46. Dandan Song, Zhidong Deng
    A BP-SCFG Based Approach for RNA Secondary Structure Prediction with Consecutive Bases Dependency and Their Relative Positions Information. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:506-517 [Conf]
  47. Minghui Jiang, Martin Mayne, Joel Gillespie
    Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:518-529 [Conf]
  48. Xuezheng Fu, Bernard Chen, Yi Pan, Robert W. Harrison
    Statistical Estimate for the Size of the Protein Structural Vocabulary. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:530-538 [Conf]
  49. Cui Lin, Shiyong Lu, Danqing Wu, Jing Hua, Otto Muzik
    Coclustering Based Parcellation of Human Brain Cortex Using Diffusion Tensor MRI. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:539-550 [Conf]
  50. Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu
    An Algorithm for Hierarchical Classification of Genes of Prokaryotic Genomes. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:551-563 [Conf]
  51. Mudassir Fayyaz, Asifullah Khan, Adnan Mujahid, Alex Kavokin
    Using Multi Level Nearest Neighbor Classifiers for G-Protein Coupled Receptor Sub-families Prediction. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:564-576 [Conf]
  52. Mark Borodovsky
    Invited Talk: Ab Initio Gene Finding Engines: What Is Under the Hood. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:577- [Conf]
  53. Marco Vassura, Luciano Margara, Filippo Medri, Pietro di Lena, Piero Fariselli, Rita Casadio
    Reconstruction of 3D Structures from Protein Contact Maps. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:578-589 [Conf]
  54. Gulsah Altun, Hae-Jin Hu, Stefan Gremalschi, Robert W. Harrison, Yi Pan
    A Feature Selection Algorithm Based on Graph Theory and Random Forests for Protein Secondary Structure Prediction. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:590-600 [Conf]
  55. Amin R. Mazloom, Kalyan Basu, Subhrangsu S. Mandal, Mehran Sorourian, Sajal K. Das
    DNA Sites Buried in Nucleosome Become Accessible at Room Temperature: A Discrete-Event-Simulation Based Modeling Approach. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:601-614 [Conf]
  56. Shiquan Wu, Jing Li
    Comparative Analysis of Gene-Coexpression Networks Across Species. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:615-626 [Conf]
  57. Jizhen Zhao, Dongsheng Che, Liming Cai
    Comparative Pathway Prediction Via Unified Graph Modeling of Genomic Structure Information. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:627-637 [Conf]
  58. Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo
    Extending the Calculus of Looping Sequences to Model Protein Interaction at the Domain Level. [Citation Graph (0, 0)][DBLP]
    ISBRA, 2007, pp:638-649 [Conf]
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