Conferences in DBLP
(isbra) 2007 (conf/isbra/2007)
Xubo Fei , Shiyong Lu , Horia F. Pop , Lily R. Liang GFBA: A Biclustering Algorithm for Discovering Value-Coherent Biclusters. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:1-12 [Conf ] Fang-Xiang Wu Significance Analysis of Time-Course Gene Expression Profiles. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:13-24 [Conf ] Juntao Li , Jianhua Liu , Karuturi R. Krishna Murthy Data-Driven Smoothness Enhanced Variance Ratio Test to Unearth Responsive Genes in 0-Time Normalized Time-Course Microarray Data. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:25-36 [Conf ] Srinath Sridhar , Fumei Lam , Guy E. Blelloch , R. Ravi , Russell Schwartz Efficiently Finding the Most Parsimonious Phylogenetic Tree Via Linear Programming. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:37-48 [Conf ] Róbert Busa-Fekete , András Kocsor , Csaba Bagyinka A Multi-Stack Based Phylogenetic Tree Building Method. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:49-60 [Conf ] Guohua Jin , Luay Nakhleh , Sagi Snir , Tamir Tuller A New Linear-Time Heuristic Algorithm for Computing the Parsimony Score of Phylogenetic Networks: Theoretical Bounds and Empirical Performance. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:61-72 [Conf ] Qihua Tan , Jesper Dahlgaard , Basem M. Abdallah , Werner Vach , Moustapha Kassem , Torben A. Kruse A Bootstrap Correspondence Analysis for Factorial Microarray Experiments with Replications. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:73-84 [Conf ] Roy Varshavsky , David Horn , Michal Linial Clustering Algorithms Optimizer: A Framework for Large Datasets. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:85-96 [Conf ] Jahangheer Shaik , Mohammed Yeasin Ranking Function Based on Higher Order Statistics (RF-HOS) for Two-Sample Microarray Experiments. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:97-108 [Conf ] Patricia Buendia , Giri Narasimhan Searching for Recombinant Donors in a Phylogenetic Network of Serial Samples. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:109-120 [Conf ] Arvind Gupta , Ján Manuch , Ladislav Stacho , Xiaohong Zhao Algorithm for Haplotype Inferring Via Galled-Tree Networks with Simple Galls. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:121-132 [Conf ] Frederick Cohan , Danny Krizanc , Yun Lu Estimating Bacterial Diversity from Environmental DNA: A Maximum Likelihood Approach. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:133-144 [Conf ] Ming Li Invited Talk: Modern Homology Search. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:145- [Conf ] Pramod K. Gupta , Ryo Yoshida , Seiya Imoto , Rui Yamaguchi , Satoru Miyano Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:146-157 [Conf ] Italo Zoppis , Daniele Merico , Marco Antoniotti , Bud Mishra , Giancarlo Mauri Discovering Relations Among GO-Annotated Clusters by Graph Kernel Methods. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:158-169 [Conf ] George Lee , Carlos Rodriguez , Anant Madabhushi An Empirical Comparison of Dimensionality Reduction Methods for Classifying Gene and Protein Expression Datasets. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:170-181 [Conf ] Robert J. Calin-Jageman , Chao Xie , Yi Pan , Art Vandenberg , Paul S. Katz NEURONgrid: A Toolkit for Generating Parameter-Space Maps Using NEURON in a Grid Environment. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:182-191 [Conf ] Leonid Zaslavsky , Yiming Bao , Tatiana A. Tatusova An Adaptive Resolution Tree Visualization of Large Influenza Virus Sequence Datasets. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:192-202 [Conf ] Gordana Derado , F. DuBois Bowman , Rajan Patel , Mary Newell , Brani Vidakovic Wavelet Image Interpolation (WII): A Wavelet-Based Approach to Enhancement of Digital Mammography Images. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:203-214 [Conf ] Yanchao Wang , Rajshekhar Sunderraman , Piyaphol Phoungphol High Level Programming Environment System for Protein Structure Data. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:215-226 [Conf ] Kung-Hua Chang , Yong Kyun Kwon , Douglas Stott Parker Jr. Finding Minimal Sets of Informative Genes in Microarray Data. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:227-236 [Conf ] Li Chen , Dmitry B. Goldgof , Lawrence O. Hall , Steven Eschrich Noise-Based Feature Perturbation as a Selection Method for Microarray Data. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:237-247 [Conf ] Igor Trajkovski , Nada Lavrac Efficient Generation of Biologically Relevant Enriched Gene Sets. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:248-259 [Conf ] Sudha Balla , Sanguthevar Rajasekaran Space and Time Efficient Algorithms to Discover Endogenous RNAi Patterns in Complete Genome Data. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:260-269 [Conf ] Scott F. Smith A Fast Approximate Covariance-Model-Based Database Search Method for Non-coding RNA. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:270-281 [Conf ] Raja Loganantharaj Extensions of Naive Bayes and Their Applications to Bioinformatics. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:282-292 [Conf ] Marília D. V. Braga , Marie-France Sagot , Celine Scornavacca , Eric Tannier The Solution Space of Sorting by Reversals. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:293-304 [Conf ] Matthias Bernt , Daniel Merkle , Martin Middendorf A Fast and Exact Algorithm for the Perfect Reversal Median Problem. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:305-316 [Conf ] Lenwood S. Heath , Amrita Pati Genomic Signatures from DNA Word Graphs. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:317-328 [Conf ] Erliang Zeng , Giri Narasimhan Enhancing Motif Refinement by Incorporating Comparative Genomics Data. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:329-337 [Conf ] Hyunmin Kim , Katherina J. Kechris , Lawrence Hunter Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:338-349 [Conf ] Allison N. Tegge , Sandra L. Rodriguez-Zas , Jonathan V. Sweedler , Bruce R. Southey Enhanced Prediction of Cleavage in Bovine Precursor Sequences. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:350-360 [Conf ] Mary Qu Yang , Laura Elnitski Invited Talk: A Computational Study of Bidirectional Promoters in the Human Genome. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:361-371 [Conf ] Mark J. Lawson , Liqing Zhang The Identification of Antisense Gene Pairs Through Available Software. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:372-381 [Conf ] Steinar Thorvaldsen , Elinor Ytterstad , Tor Flå Inferring Weak Adaptations and Selection Biases in Proteins from Composition and Substitution Matrices. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:382-393 [Conf ] Michael E. Sparks , Volker Brendel , Karin S. Dorman Markov Model Variants for Appraisal of Coding Potential in Plant DNA. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:394-405 [Conf ] Zheng Rong Yang Predicting Palmitoylation Sites Using a Regularised Bio-basis Function Neural Network. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:406-417 [Conf ] Hao Yu , Minlie Huang , Xiaoyan Zhu , Yabin Guo A Novel Kernel-Based Approach for Predicting Binding Peptides for HLA Class II Molecules. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:418-429 [Conf ] Margaret Dah-Tsyr Chang , Hao-Teng Chang , Rong-Yuan Huang , Wen-Shyong Tzou , Chih-Hong Liu , Wei-Jun Zhung , Hsien-Wei Wang , Chun-Tien Chang , Tun-Wen Pai A Database for Prediction of Unique Peptide Motifs as Linear Epitopes. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:430-440 [Conf ] Dan He A Novel Greedy Algorithm for the Minimum Common String Partition Problem. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:441-452 [Conf ] Mun-Ho Choi , In-Seon Jeong , Seung-Ho Kang , Hyeong-Seok Lim An Efficient Algorithm for Finding Gene-Specific Probes for DNA Microarrays. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:453-464 [Conf ] Chengpeng Bi Multiple Sequence Local Alignment Using Monte Carlo EM Algorithm. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:465-476 [Conf ] Hyunsoo Kim , Haesun Park Cancer Class Discovery Using Non-negative Matrix Factorization Based on Alternating Non-negativity-Constrained Least Squares. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:477-487 [Conf ] Chen Liao , Shutao Li A Support Vector Machine Ensemble for Cancer Classification Using Gene Expression Data. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:488-495 [Conf ] Xiujuan Chen , Yichuan Zhao , Yan-Qing Zhang , Robert Harrison Combining SVM Classifiers Using Genetic Fuzzy Systems Based on AUC for Gene Expression Data Analysis. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:496-505 [Conf ] Dandan Song , Zhidong Deng A BP-SCFG Based Approach for RNA Secondary Structure Prediction with Consecutive Bases Dependency and Their Relative Positions Information. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:506-517 [Conf ] Minghui Jiang , Martin Mayne , Joel Gillespie Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:518-529 [Conf ] Xuezheng Fu , Bernard Chen , Yi Pan , Robert W. Harrison Statistical Estimate for the Size of the Protein Structural Vocabulary. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:530-538 [Conf ] Cui Lin , Shiyong Lu , Danqing Wu , Jing Hua , Otto Muzik Coclustering Based Parcellation of Human Brain Cortex Using Diffusion Tensor MRI. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:539-550 [Conf ] Hongwei Wu , Fenglou Mao , Victor Olman , Ying Xu An Algorithm for Hierarchical Classification of Genes of Prokaryotic Genomes. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:551-563 [Conf ] Mudassir Fayyaz , Asifullah Khan , Adnan Mujahid , Alex Kavokin Using Multi Level Nearest Neighbor Classifiers for G-Protein Coupled Receptor Sub-families Prediction. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:564-576 [Conf ] Mark Borodovsky Invited Talk: Ab Initio Gene Finding Engines: What Is Under the Hood. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:577- [Conf ] Marco Vassura , Luciano Margara , Filippo Medri , Pietro di Lena , Piero Fariselli , Rita Casadio Reconstruction of 3D Structures from Protein Contact Maps. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:578-589 [Conf ] Gulsah Altun , Hae-Jin Hu , Stefan Gremalschi , Robert W. Harrison , Yi Pan A Feature Selection Algorithm Based on Graph Theory and Random Forests for Protein Secondary Structure Prediction. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:590-600 [Conf ] Amin R. Mazloom , Kalyan Basu , Subhrangsu S. Mandal , Mehran Sorourian , Sajal K. Das DNA Sites Buried in Nucleosome Become Accessible at Room Temperature: A Discrete-Event-Simulation Based Modeling Approach. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:601-614 [Conf ] Shiquan Wu , Jing Li Comparative Analysis of Gene-Coexpression Networks Across Species. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:615-626 [Conf ] Jizhen Zhao , Dongsheng Che , Liming Cai Comparative Pathway Prediction Via Unified Graph Modeling of Genomic Structure Information. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:627-637 [Conf ] Roberto Barbuti , Andrea Maggiolo-Schettini , Paolo Milazzo Extending the Calculus of Looping Sequences to Model Protein Interaction at the Domain Level. [Citation Graph (0, 0)][DBLP ] ISBRA, 2007, pp:638-649 [Conf ]