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Conferences in DBLP

IEEE Computer Society Bioinformatics Conference (CSB) (csb)
2003 (conf/csb/2003)

  1. Marvin Frazier, David Thomassen, Aristides Patrinos, Gary Johnson, Carl Edward Oliver, Edward C. Uberbacher
    Stepping Up the Pace of Discovery: the Genomes to Life Program. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:2-9 [Conf]
  2. Richard M. Karp
    The Role of Algorithmic Research in Computational Genomics. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:10-12 [Conf]
  3. Philip E. Bourne
    High Performance Computational Biology - Past Progress and Future Promise. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:13- [Conf]
  4. Jehoshua Bruck
    Bridging Paradigm Gaps Between Biology and Engineering. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:14- [Conf]
  5. Jean-Michel Claverie
    Microbial Functional Genomics: Pulling Together a Variety of Approaches and Concepts. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:15- [Conf]
  6. Eric H. Davidson
    The Sea Urchin Endomesoderm Gene Regulatory Network, an Encoded Logic Map for Early Development. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:16- [Conf]
  7. Liliana Florea, Bjarni V. Halldórsson, Oliver Kohlbacher, Russell Schwartz, Stephen Hoffman, Sorin Istrail
    Epitope Prediction Algorithms for Peptide based Vaccine Design. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:17-26 [Conf]
  8. Peter D. Karp
    Pathway Bioinformatics. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:27- [Conf]
  9. Jun Liu
    BPPS: An Algorithm for Analyzing Protein Sequence Alignments. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:28- [Conf]
  10. Michael S. Waterman, Yu Zhang
    Eulerian Path Methods for Multiple Sequence Alignment. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:29- [Conf]
  11. Stephen Wong
    Integrating Bioinformatics Advances into Disease Management Systems to Improve Quality of Care. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:30- [Conf]
  12. Edward C. Uberbacher, David Thomassen, Aristides Patrinos, Gary Johnson, Carl Edward Oliver, Marvin Frazier
    Computing for the DOE Genomes to Life Program. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:32- [Conf]
  13. Adam P. Arkin
    Motifs and Modules in Cellular Signal Processing: Applications to Microbial Stress Response Pathways. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:33- [Conf]
  14. Grant Heffelfinger
    An Overview of the Sandia National Laboratories Genomes to Life Project, "Carbon Sequestration in Synechococcus Sp.: From Molecular Machines to Hierarchical Modeling". [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:34- [Conf]
  15. Derek Lovley
    Analysis of the Genetic Potential and Gene Expression of Microbial Communities Involved in the In Situ Bioremediation of Uranium and Harvesting ElectricalEnergy from Organic Matter. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:35-37 [Conf]
  16. Andres Figueroa, James Borneman, Tao Jiang
    Clustering Binary Fingerprint Vectors with Missing Values for DNA Array Data Analysis. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:38-47 [Conf]
  17. Tanveer Fathima Syeda-Mahmood
    Clustering Time-Varying Gene Expression Profiles using Scale-space Signals. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:48-56 [Conf]
  18. Sven Rahmann
    Fast and Sensitive Probe Selection for DNA Chips Using Jumps in Matching Statistics. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:57-64 [Conf]
  19. Wing-Kin Sung, Wah-Heng Lee
    Fast and Accurate Probe Selection Algorithm for Large Genomes. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:65-74 [Conf]
  20. Xintao Wei, David N. Kuhn, Giri Narasimhan
    Degenerate Primer Design via Clustering. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:75-83 [Conf]
  21. Alexander Schliep, David C. Torney, Sven Rahmann
    Group Testing With DNA Chips: Generating Designs and Decoding Experiments. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:84-93 [Conf]
  22. Nigam Shah, Jorge Lepre, Yuhai Tu, Gustavo Stolovitzky
    Can We Identify Cellular Pathways Implicated in Cancer Using Gene Expression Data? [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:94-103 [Conf]
  23. Seiya Imoto, Tomoyuki Higuchi, Takao Goto, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano
    Combining Microarrays and Biological Knowledge for Estimating Gene Networks via Bayesian Networks. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:104-113 [Conf]
  24. Simone Bentolila
    Two operative concepts for the post-genomic era: the "me'moire vive" of the cell and a molecular algebra. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:114-123 [Conf]
  25. Dennis L. Chao, Miles P. Davenport, Stephanie Forrest, Alan S. Perelson
    Stochastic Stage-structured Modeling of the Adaptive Immune System. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:124-131 [Conf]
  26. Shuo Liu, Steve Lin, Mark Woon, Teri E. Klein, Russ B. Altman
    A Personalized and Automated dbSNP Surveillance System. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:132-136 [Conf]
  27. Li Zhang, Aidong Zhang, Murali Ramanathan
    Fourier Harmonic Approach for Visualizing Temporal Patterns of Gene Expression Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:137-147 [Conf]
  28. Orhan Çamoglu, Tamer Kahveci, Ambuj K. Singh
    Towards Index-based Similarity Search for Protein Structure Databases. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:148-158 [Conf]
  29. Matthias Höchsmann, Thomas Töller, Robert Giegerich, Stefan Kurtz
    Local Similarity in RNA Secondary Structures. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:159-168 [Conf]
  30. Tolga Can, Yuan-Fang Wang
    CTSS: A Robust and Efficient Method for Protein Structure Alignment Based on Local Geometrical and Biological Feature. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:169-179 [Conf]
  31. Werner G. Krebs, Philip E. Bourne
    Statistical and Visual Morph Movie Analysis of Crystallographic Mutant Selection Bias in Protein Mutation Resource Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:180-189 [Conf]
  32. Shu-Yun Le, Jih-H. Chen, Jacob V. Maizel
    Statistical Inference for Well-ordered Structures in Nucleotide Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:190-196 [Conf]
  33. Xiang Wan, Dong Xu, Carolyn M. Slupsky, Guohui Lin
    Automated Protein NMR Resonance Assignments. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:197-208 [Conf]
  34. Christopher James Langmead, Bruce Randall Donald
    3D Structural Homology Detection via Unassigned Residual Dipolar Couplings. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:209-219 [Conf]
  35. Hwanjo Yu, Jiong Yang, Wei Wang, Jiawei Han
    Discovering Compact and Highly Discriminative Features or Feature Combinations of Drug Activities Using Support Vector Machines. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:220-228 [Conf]
  36. Jake Yue Chen, Andrey Y. Sivachenko, Russell Bell, Cornelia Kurschner, Irene Ota, Sudhir Sahasrabudhe
    Initial Large-scale Exploration of Protein-protein Interactions in Human Brain. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:229-234 [Conf]
  37. Gong-Xin Yu, George Ostrouchov, Al Geist, Nagiza F. Samatova
    An SVM-based Algorithm for Identification of Photosynthesis-specific Genome Features. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:235-243 [Conf]
  38. Robert L. Grossman, Pavan Kasturi, Donald Hamelberg, Bing Liu
    Experimental Studies of the Universal Chemical Key (UCK)Algorithm on the NCI Database of Chemical Compounds. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:244-250 [Conf]
  39. Kazuhiro Seki, Javed Mostafa
    A Probabilistic Model for Identifying Protein Names and their Name Boundaries. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:251-259 [Conf]
  40. Shoudan Liang
    cWINNOWER Algorithm for Finding Fuzzy DNA Motifs. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:260-265 [Conf]
  41. Eric P. Xing, Wei Wu, Michael I. Jordan, Richard M. Karp
    LOGOS: a modular Bayesian model for de novo motif detection. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:266-276 [Conf]
  42. Mihaela Zavolan, Nicholas D. Socci, Nikolaus Rajewsky, Terry Gaasterland
    SMASHing regulatory sites in DNA by human. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:277-287 [Conf]
  43. G. Sampath
    A Block Coding Method that Leads to Significantly Lower Entropy Values for the Proteins and Coding Sections of Haemophilus influenzae. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:287-293 [Conf]
  44. Ravi Vijaya Satya, Amar Mukherjee, Udaykumar Ranga
    A Pattern Matching Algorithm for Codon Optimization and CpG Motif-Engineering in DNA Expression Vectors. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:294-305 [Conf]
  45. Russell Schwartz
    Haplotype Motifs: An Algorithmic Approach to Locating Evolutionarily Conserved Patterns in Haploid Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:306-315 [Conf]
  46. Tomoyuki Yamada, Shinichi Morishita
    Computing Highly Specific and Mismatch Tolerant Oligomers Efficiently. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:316-325 [Conf]
  47. Cinzia Di Pietro, V. Di Pietro, G. Emmanuele, Alfredo Ferro, T. Maugeri, E. Modica, Giuseppe Pigola, Alfredo Pulvirenti, Michele Purrello, Marco Ragusa, M. Scalia, Dennis Shasha, S. Travali, V. Zimmitti
    ANTICLUSTAL: Multiple Sequence Alignment by Antipole Clustering and Linear Approximate 1-Median Computation. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:326-336 [Conf]
  48. Francis Y. L. Chin, N. L. Ho, Tak Wah Lam, Prudence W. H. Wong, Mee Yee Chan
    Efficient Constrained Multiple Sequence Alignment with Performance Guarantee. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:337-346 [Conf]
  49. Kuen-Pin Wu, Hsin-Nan Lin, Ting-Yi Sung, Wen-Lian Hsu
    A New Similarity Measure among Protein Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:347-352 [Conf]
  50. Alexandre Tchourbanov, Daniel Quest, Hesham H. Ali, Mark Pauley, Robert Norgren
    A New Approach for Gene Annotation Using Unambiguous Sequence Joining. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:353-362 [Conf]
  51. Dan Gusfield, Satish Eddhu, Charles H. Langley
    Efficient Reconstruction of Phylogenetic Networks with Constrained Recombination. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:363-374 [Conf]
  52. Bailin Hao, Ji Qi
    Prokaryote Phylogeny without Sequence Alignment: From Avoidance Signature to Composition Distance. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:375-385 [Conf]
  53. Monica Chagoyen, M. Erdem Kurul, Pedro A. de Alarcón, Simone Santini, Bertram Ludäscher, José María Carazo, Amarnath Gupta
    A Semantic Mediation Approach for Problems in Computational Molecular Biology. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:386-387 [Conf]
  54. Barbara A. Eckman, Kerry Deutsch, Marta Janer, Zoé Lacroix, Louiqa Raschid
    A Query Language to Support Scientific Discovery. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:388-391 [Conf]
  55. Zhong-Hui Duan, Louis S. Liou, Ting Shi, Joseph A. DiDonato
    Application of Singular Value Decomposition and Functional Clustering to Analyzing Gene Expression Profiles of Renal Cell Carcinoma. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:392-393 [Conf]
  56. Xin Lu, Wen Zhang, Zhaohui S. Qin, Jun S. Liu
    Statistical Resynchronization and Detection of Periodic Transcripts. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:394-395 [Conf]
  57. George C. Tseng, Wing Hung Wong
    A Method for Tight Clustering: with Application to Microarray. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:396-397 [Conf]
  58. Richard J. Carter
    Riptide: Fast Protein Identification from Mass Spectrometer Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:398-399 [Conf]
  59. James H. Graham, C. David Page Jr., Ahmed H. Kamal
    Accelerating the Drug Design Process through Parallel Inductive Logic Programming Data Mining. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:400-402 [Conf]
  60. Mingzhou Song, Stephane Boissinot, Robert M. Haralick, Ihsin T. Phillips
    Estimating Recombination Rate Distribution by Optimal Quantization. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:403-406 [Conf]
  61. Jane Fridlyand, Antoine Snijders, Dan Pinkel, Donna Albertson, Ajay N. Jain
    Statistical issues in the analysis of the array CGH data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:407-408 [Conf]
  62. M. Duncan, K. Fung, H. Wang, C. Yen, K. Cios
    Identification of Contaminants in Proteomics Mass Spectrometry Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:409-410 [Conf]
  63. Stephen Osborn, Scot Kennedy, Daniel Chin
    A Flexible Pipeline for Experimental Design, Processing, and Analysis of Microarray Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:411-412 [Conf]
  64. Xutao Deng, Hesham H. Ali
    A Computational Approach to Reconstructing Gene Regulatory Networks. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:413-414 [Conf]
  65. Tema Fridman, Robert Day, Jane Razumovsbya, Dong Xu, Andrey Gorin
    Probability Profiles - Novel Approach in Tandem Mass Spectrometry De Novo Sequencing. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:415-418 [Conf]
  66. Eric G. Stephan, George Chin Jr., Kyle R. Klicker, Abigail L. Corrigan, Heidi J. Sofia
    A Symbolic Logic Strategy For Mapping Biological Concepts in the HERBE Prototype. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:419-420 [Conf]
  67. Jane Razumovskaya, Victor Olman, Dong Xu, Edward C. Uberbacher, Nathan Verberkmoes, Ying Xu
    A Computational Method for Assessing Peptide-Identification Reliability in Tandem Mass Spectrometry Analysis with SEQUEST. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:421-423 [Conf]
  68. Zhangjun Fei, Xuemei Tang, Rob Alba, Paxton Payton, James Giovannoni
    Tomato Expression Database (TED) - An Interactive Management Tool for Tomato Expression Profiling Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:424-425 [Conf]
  69. Harpreet Kaur Gill
    Oncogenetics Tree Models - An Estimation. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:426- [Conf]
  70. Marilyn Safran, Vered Chalifa-Caspi, Orit Shmueli, Naomi Rosen, Hila Benjamin-Rodrig, Ron Ophir, Itai Yanai, Michael Shmoish, Doron Lancet
    The GeneCardsTM Family of Databases: GeneCards, GeneLoc, GeneNote and GeneAnnot. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:427-428 [Conf]
  71. Taku A. Tokuyasu, Donna Albertson, Dan Pinkel, Ajay N. Jain
    Wavelet Transforms for the Analysis of Microarray Experiments. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:429-430 [Conf]
  72. Bill Martin, Robert M. Horton
    MageBuilder: A Schema Translation Tool for Generating MAGE-ML from Tabular Microarray Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:431-432 [Conf]
  73. Wenwu Cui, Jianchang Ning, Ulhas P. Naik, Melinda K. Duncan
    OptiRNai, a Web-based Program to Select siRNA Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:433-434 [Conf]
  74. Bartosz Wilczynski, Torgeir R. Hvidsten, Andriy Kryshtafovych, Lisa Stubbs, Henryk Jan Komorowski, Krzysztof Fidelis
    A rule-based framework for gene regulation pathways discovery. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:435-436 [Conf]
  75. Qing Dong, Rama Balakrishnan, Gail Binkley, Karen R. Christie, Maria C. Costanzo, Kara Dolinski, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Jodi E. Hirschman, Eurie L. Hong, Robert S. Nash, Laurie Issel-Tarver, Anand Sethuraman, Chandra L. Theesfeld, Shuai Weng, David Botstein, J. Michael Cherry
    Gene Function, Metabolic Pathways and Comparative Genomics in Yeast. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:437-438 [Conf]
  76. Gary Livingston, Xiao Li, Guangyi Li, Liwu Hao, Jiangping Zhou
    Using Rule Induction Methods to Analyze Gene Expression Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:439-441 [Conf]
  77. Sailu Yellaboina, Prachee Chakhaiyar, Seyed Ehetsham Hasnain, Akash Ranjan
    Computational prediction of DtxR regulon-A Dissection of physiological process controlled by DtxR in Corynebacterium species. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:442-443 [Conf]
  78. Shaun Mahony, Terry J. Smith, James O. McInerney, Aaron Golden
    A New Approach to Gene Prediction Using the Self-Organizing Map. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:444-445 [Conf]
  79. Rong Chen, Hesham H. Ali
    On Gene Prediction by Cross-Species Comparative Sequence Analysis. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:446-447 [Conf]
  80. Victor Olman, Dong Xu, Ying Xu
    CUBIC: Identification of Regulatory Binding Sites Through Data Clustering. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:448-449 [Conf]
  81. Yoko Higashi, Hirotaka Higuchi, Takashi Kido, Hirohito Matsumine, Masanori Baba, Toshihiko Morimoto, Masaaki Muramatsu
    SNP Analysis System for Detecting Complex Disease Associated Sites. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:450-451 [Conf]
  82. Takashi Kido, Masanori Baba, Hirohito Matsumine, Yoko Higashi, Hirotaka Higuchi, Masaaki Muramatsu
    Haplotype Pattern Mining & Classification for detecting disease associated Site. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:452-455 [Conf]
  83. Seung Yup Lee, Yoshimi Fujitsuka, Shoji Takada, Do Hyun Kim
    What makes IgG binding domain of protein L fold up to native state: a simulation study with physical oriented energy functions coupled to topology induced terms. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:456-457 [Conf]
  84. Igor Tsukerman
    New Computational Methods for Electrostatics in Macromolecular Simulation. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:458-459 [Conf]
  85. Chengpeng Bi, Craig J. Benham
    The Approximate Algorithm for Analysis of the Strand Separation Transition in Super helical DNA Using Nearest Neighbor Energetics. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:460-461 [Conf]
  86. Kaori Ueno-Noto, Keiko Takano, Miki Hara-Yokoyama
    Substrate Recognition by Enzymes: a Theoretical Study. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:462-463 [Conf]
  87. Peter M. Kasson, Vijay S. Pande
    Computational Simulation of Lipid Bilayer Reorientation at Gaps. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:464-467 [Conf]
  88. Liaofu Luo, Li-Ching Hsieh, Fengmin Ji, Mengwen Jia, H. C. Lee
    Search for Evolution-Related-Oligonucleotides and Conservative Words in rRNA Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:468-469 [Conf]
  89. Terrence S. T. Mak, K. P. Lam
    High Speed GAML-based Phylogenetic Tree Reconstruction Using HW/SW Codesign. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:470-473 [Conf]
  90. Li-Ching Hsieh, Liaofu Luo, H. C. Lee
    Evidence for Growth of Microbial Genomes by Short Segmental Duplications. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:474-475 [Conf]
  91. Chen Yang, Sami Khuri
    PTC: An Interactive Tool for Phylogenetic Tree Construction. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:476-477 [Conf]
  92. Sören W. Perrey, Heinrich Brinck, Achim Zielesny
    Iterative Rank based Methods for Clustering. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:478-479 [Conf]
  93. Ghislain Bidaut, Karsten Suhre, Jean-Michel Claverie, Michael F. Ochs
    Analysis of Phylogenetic Profiles Using Bayesian Decomposition. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:480-481 [Conf]
  94. Yunfeng Shan, Evangelos E. Milios, Andrew J. Roger, Christian Blouin, Edward Susko
    Automatic Recognition of Regions of Intrinsically Poor Multiple Alignment Using Machine Learning. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:482-483 [Conf]
  95. Jun Huan, Jan Prins, Wei Wang, Todd J. Vision
    Reconstruction of Ancestral Gene Order after Segmental Duplication and Gene Loss. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:484-485 [Conf]
  96. Yuhong Wang, John P. Rose, Bi-Cheng Wang, Dawei Lin
    Reconstruction of Ancient Operons From Complete Microbial Genome Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:486-487 [Conf]
  97. Hsiang Chi Huang
    An Evolutionary Approach to Finding Schemas for 3-Class Protein Secondary Structure Prediction. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:488-491 [Conf]
  98. Dechang Chen, Dong Hua, Jaques Reifman, Xiuzhen Cheng
    Gene Selection for Multi-Class Prediction of Microarray Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:492-495 [Conf]
  99. Dong Hua, Dechang Chen, Xiuzhen Cheng, Abdou Youssef
    Latent Structure Models for the Analysis of Gene Expression Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:496-499 [Conf]
  100. Yoshiharu Hayashi, Katsuyoshi Sakaguchi, Nao Iwata, Masaki Kobayashi
    Molecular Evaluation using Comparative Molecular Interaction Profile Analysis system. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:500-501 [Conf]
  101. Vincent Van Buren, Toshiyuki Yoshikawa, Toshio Hamatani, Minoru S. H. Ko
    Probe Design for Large-Scale Molecular Biology Applications. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:502-503 [Conf]
  102. Xue-wen Chen
    Gene Selection for Cancer Classification Using Bootstrapped Genetic Algorithms and Support Vector Machines. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:504-505 [Conf]
  103. I-Jeng Wang, Christopher P. Diehl, Fernando J. Pineda
    A Statistical Model of Proteolytic Digestion. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:506-508 [Conf]
  104. Jianchang Ning, Charles N. Moore, J. Clare Nelson
    Preliminary Wavelet Analysis of Genomic Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:509-510 [Conf]
  105. Vojislav Stojkovic, Grace Steele, William Lupton
    Using Easel for Modeling and Simulating the Interactions of Cells in Order to Better Understand the Basics of Biological Processes and to Predict Their Likely Behaviors. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:511-516 [Conf]
  106. Andriy Kryshtafovych, Torgeir R. Hvidsten, Henryk Jan Komorowski, Krzysztof Fidelis
    Fold Recognition Using Sequence Fingerprints of Protein Local Substructures. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:517-518 [Conf]
  107. Jianhua Ruan, Gary D. Stormo, Weixiong Zhang
    An Iterative Loop Matching Approach to the Prediction of RNA Secondary Stru. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:519-520 [Conf]
  108. Hirotoshi Taira, Tomonori Izumitani, Eisaku Maeda, Takeshi Suzuki
    A New Method for Predicting RNA Secondary Structure. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:521-522 [Conf]
  109. Chris H. Q. Ding, Hanchuan Peng
    Minimum Redundancy Feature Selection from Microarray Gene Expression Data. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:523-529 [Conf]
  110. Jianping Zhou, Gary Livingston, Georges G. Grinstein
    Automatic Parameter Selection for Sequence Similarity Search. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:530-531 [Conf]
  111. Fern Y. Hunt, Anthony J. Kearsley, Agnes O'Gallagher
    A Linear Programming Based Algorithm for Multiple Sequence Alignments. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:532-533 [Conf]
  112. Tuan Pham
    Alignment-Free Sequence Comparison with Vector Quantization and Hidden Markov Models. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:534-535 [Conf]
  113. Krishna Gopalakrishnan, Kayvan Najarian
    Prediction of Protein Function Using Signal Processing of Biochemical Properties. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:536-538 [Conf]
  114. Shih-Chieh Su, Chia H. Yeh, C. C. Jay Kuo
    Genomic Sequence Analysis Using Gap Sequences and Pattern Filtering. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:539-540 [Conf]
  115. Wojciech Szpankowski, Wenhui Ren, Lukasz Szpankowski
    An Optimal DNA Segmentation Based on the MDL Principle. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:541-546 [Conf]
  116. Carl E. McMillin, Robert M. Horton
    The Cybertory Sequence File System for Managing Large DNA Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:547-548 [Conf]
  117. Weirong Zhu, Yanwei Niu, Jizhu Lu, Guang R. Gao
    Implementing Parallel Hmm-pfam on the EARTH Multithreaded Architecture. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:549-550 [Conf]
  118. Tamer Kahveci, Ambuj K. Singh
    Genome on Demand: Interactive Substring Searching. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:551-552 [Conf]
  119. Hong Sun, Ozgur Ozturk, Hakan Ferhatosmanoglu
    CoMRI: A Compressed Multi-Resolution Index Structure for Sequence Similarity Queries. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:553-559 [Conf]
  120. Holger Mauch, Michael J. Melzer, John S. Hu
    Genetic Algorithm Approach for the Closest String Problem. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:560-561 [Conf]
  121. Youlian Pan, Fazel Famili
    GenericBioMatch: A novel generic pattern match algorithm for biological sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:562-563 [Conf]
  122. F. R. Hsu, J. F. Chen
    Aligning ESTs to Genome Using Multi-Layer Unique Makers. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:564-566 [Conf]
  123. Suchendra M. Bhandarkar, Jinling Huang, Jonathan Arnold
    A Parallel Genetic Algorithm for Physical Mapping of Chromosomes. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:567-572 [Conf]
  124. Xiaolu Huang, Hesham H. Ali
    RCIS: A Common Interval Searching Algorithm for Amino Acid Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:573-574 [Conf]
  125. Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski
    Algorithms for Bounded-Error Correlation of High Dimensional Data in Microarray Experiments. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:575-580 [Conf]
  126. Yimin Jing, Sami Khuri
    Exact and Heuristic Algorithms for the DNA Fragment Assembly Problem. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:581-582 [Conf]
  127. Ezekiel F. Adebiyi, Tinuke Dipe
    Finding Higher Order Motifs under the Levenshtein Measure. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:583-584 [Conf]
  128. Brendan Mumey, Thomas Angel, Bonnie Kirkpatrick, Brian W. Bailey, P. Hargrave, Algirdas J. Jesaitis, Edward A. Dratz
    Mapping Discontinuous Antibody Epitopes to Reveal Protein Structure and Changes in Structure Related to Function. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:585-586 [Conf]
  129. Donald A. Adjeroh, Jianan Feng
    The SCP and Compressed Domain Analysis of Biological Sequences. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:587-592 [Conf]
  130. Cun-Quan Zhang, Yunkai Liu, Elaine M. Eschen, Keqiang Wu
    Identifying Regulatory Signals in DNA-Sequences with a Non-statistical Approximation Approach. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:593-597 [Conf]
  131. Matthew Palensky, Hesham H. Ali
    A Genetic Algorithm for Simplifying The Amino Acid Alphabet. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:598-601 [Conf]
  132. Danny Barash
    Spectral Decomposition of the Laplacian Matrix Applied to RNA Folding Prediction. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:602-603 [Conf]
  133. Igor B. Kuznetsov, Shelly Rackovsky
    Identification of Non-Random Patterns in Structural and Mutational Data: the Case of Prion Protein. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:604-608 [Conf]
  134. Luonan Chen
    Multiple Protein Structure Alignment by Deterministic Annealing. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:609-610 [Conf]
  135. Lincong Wang, Ramgopal R. Mettu, Ryan H. Lilien, Bruce Randall Donald
    An Exact Algorithm For Determining Protein Backbone Structure From NH Residual Dipolar Couplings. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:611-612 [Conf]
  136. Mike P. Liang, Douglas L. Brutlag, Russ B. Altman
    Automatic Construction of 3D Structural Motifs for Protein Function Prediction. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:613-614 [Conf]
  137. Eugene Santos Jr., Keum Joo Kim, Eunice E. Santos
    Local Minima-Based Exploration for Off-Lattice Protein Folding. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:615-617 [Conf]
  138. Carolyn L. Talcott, Steven Eker, Merrill Knapp, Patrick Lincoln, Keith Laderoute
    Pathway Logic Modeling of Protein Functional Domains in Signal Transduction. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:618-619 [Conf]
  139. Richard L. Schiek, Elebeoba E. May
    Development of a Massively-Parallel, Biological Circuit Simulator. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:620-622 [Conf]
  140. Chitta Baral, Karen Chancellor, Nam Tran, Nhan Tran
    Representing and reasoning about signal networks: an illustration using NF\kappaB dependent signaling pathways. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:623-628 [Conf]
  141. Yoshihiro Morishita, Kazuyuki Aihara
    Noise-Attenuation in Artificial Genetic Networks. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:629-630 [Conf]
  142. Zhengchang Su, PhuongAn Dam, X. Chen, Victor Olman, Tao Jiang, B. Palenik, Ying Xu
    Computational Inference of Regulatory Pathways in Microbes. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:631-633 [Conf]
  143. Steve Racunas, Nigam Shah, Nina V. Fedoroff
    A Contradiction-Based Framework for Testing Gene Regulation Hypotheses. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:634-638 [Conf]
  144. Weijian Xuan, Stanley J. Watson, Huda Akil, Fan Meng
    Identifying Gene and Protein Names from Biological Texts. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:639-643 [Conf]
  145. Rachel Harte, Yan Lu, Stephen Osborn, David Dehoney, Daniel Chin
    Refining the Extraction of Relevant Documents from Biomedical Literature to Create a Corpus for Pathway Text Mining. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:644-645 [Conf]
  146. David Dehoney, Rachel Harte, Yan Lu, Daniel Chin
    Using Natural Language Processing and the Gene Ontology to Populate a Structured Pathway Database. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:646-647 [Conf]
  147. Andrea Elaina Grimes, Robert P. Futrelle
    Text Pattern Visualization for analysis of biology full text and captions. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:648-653 [Conf]
  148. Melanie A. Sutton, Lori Deneke, John Eme, Wayne Bennett, Frank Wray
    Development and Assessment of Bioinformatics Tools for Species Conservation and Habitat Management. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:654-655 [Conf]
  149. Joseph Gerrein, Armen Kherlopian, Vezen Wu, Mitchell Berman, Alvin Wald
    MedfoLink: Bridging the Gap between IT and the Medical Community. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:656-657 [Conf]
  150. Can V. Tran, Nelson M. Yang, Milton H. Saier Jr.
    TC-DB: An Architecture for Membrane Transport Protein Analysis. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:658-660 [Conf]
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