Conferences in DBLP
Preface. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:- [Conf ] Pierre Baldi , Søren Brunak Bioethics, Fiction Science, and the Future of Mankind - Session Introduction. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:- [Conf ] Francisco M. de la Vega , Martin Kreitman , Isaac S. Kohane Human Genome Variation: Linking Genotypes to Clinical Phenotypes - Session Introduction. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:3-5 [Conf ] Atul J. Butte , J. Ye , G. Niederfellner , K. Rett , H. U. Häring , M. F. White , Isaac S. Kohane Determining Significant Fold Differences in Gene Expression Analysis. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:6-17 [Conf ] Derek Gordon , Jürg Ott Assessment and Management of Single Nucleotide Polymorphism Genotype Errors in Genetic Association. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:18-29 [Conf ] Ju-Han Kim , Lucila Ohno-Machado , Isaac S. Kohane Unsupervised Learning from Complex Data: The Matrix Incision Tree Algorithm. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:30-41 [Conf ] Gregory T. Klus , Andrew Song , Ari Schick , Mattias Wahde , Zoltan Szallasi Mutual Information Analysis as a Tool to Assess the Role of Aneuploidy in the Generation of Cancer-Associated Differential Gene Expression Patterns. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:42-51 [Conf ] Peter J. Park , Marcello Pagano , Marco Bonetti A Nonparametric Scoring Algorithm for Identifying Informative Genes from Microarray Data. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:52-63 [Conf ] Clay Bracken , Malin M. Young , A. Keith Dunker Disorder and Flexibility in Protein Structure and Function - Session Introduction. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:64-66 [Conf ] Andrei T. Alexandrescu An NMR-Based Quenched Hydrogen Exchange Investigation of Model Amyloid Fibrils Formed by Cold Shock Protein A. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:67-78 [Conf ] J. J. Prompers , S. F. Lienin , R. Brüschweiler Collective Reorientational Motion and Nuclear Spin Relaxation in Proteins. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:79-88 [Conf ] R. M. Williams , Zoran Obradovic , V. Mathura , W. Braun , E. C. Garner , J. Young , S. Takayama , Celeste J. Brown , A. Keith Dunker The Protein Non-Folding Problem: Amino Acid Determinants of Intrinsic Order and Disorder. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:89-100 [Conf ] P. F. Baldi , Richard H. Lathrop DNA Structure, Protein-DNA Interactions, and DNA-Protein Expression - Session Introduction. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:101-102 [Conf ] Craig J. Benham Stress-Induced DNA Duplex Destabilization in Transcriptional Initiation. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:103-114 [Conf ] Panayiotis V. Benos , Alan S. Lapedes , D. S. Fields , Gary D. Stormo SAMIE: Statistical Algorithm for Modeling Interaction Energies. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:115-126 [Conf ] X. Liu , Douglas L. Brutlag , Jun S. Liu BioProspector: Discovering Conserved DNA Motifs in Upstream Regulatory Regions of Co-Expressed Genes. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:127-138 [Conf ] Y. Mandel-Gutfreund , A. Baron , Hanah Margalit A Structure-Based Approach for Prediction of Protein Binding Sites in Gene-Upstream Regions. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:139-150 [Conf ] Paul Pavlidis , Terrence S. Furey , M. Liberto , David Haussler , William Noble Grundy Promoter Region-Based Classification of Genes. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:151-164 [Conf ] Richard A. Goldstein , David D. Pollock , Jeffrey L. Thorne Structures, Phylogenies, and Genomes: The Integrated Study of Protein Evolution - Session Introduction. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:164-166 [Conf ] John S. Conery , Michael Lynch Nucleotide Substitutions and the Evolution of Duplicate Genes. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:167-178 [Conf ] Jotun Hein An Algorithm for Statistical Alignment of Sequences Related by a Binary Tree. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:179-190 [Conf ] Jeffrey M. Koshi , Richard A. Goldstein Analyzing Rate Heterogeneity During Protein Evolution. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:191-202 [Conf ] Andrey Rzhetsky , Pavel Morozov Markov Chain Monte Carlo Computation of Confidence Intervals for Substitution-Rate Variation in Proteins. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:203-214 [Conf ] Simon Tavaré , Dean C. Adams , Olivier Fedrigo , Gavin J. P. Naylor A Model for Phylogenetic Inference Using Structural and Chemical Covariates. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:215-225 [Conf ] Ziheng Yang Maximum Likelihood Analysis of Adaptive Evolution in HIV-1 Gp120 env Gene. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:226-237 [Conf ] Thomas E. Ferrin , Bruce A. Foster , Richard Hughey High Performance Computing for Computational Biology - Session Introduction. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:238-239 [Conf ] D. Rey Banatao , Conrad C. Huang , Patricia C. Babbitt , Russ B. Altman , Teri E. Klein ViewFeature: Integrated Feature Analysis and Visualization. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:240-250 [Conf ] Alexander Dimitrov , John P. Miller Analyzing Sensory Systems with the Information Distortion Function. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:251-262 [Conf ] Leslie Grate , Mark Diekhans , David M. Dahle , Richard Hughey Sequence Analysis With the Kestrel SIMD Parallel Processor. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:263-274 [Conf ] Chittibabu Guda , Eric D. Scheeff , Philip E. Bourne , Ilya N. Shindyalov A New Algorithm for the Alignment of Multiple Protein Structures Using Monte Carlo Optimization. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:275-286 [Conf ] Tai Hsu , Paul Cull Gene Verification and Discovery by Walking Tree Method. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:287-298 [Conf ] Torgeir R. Hvidsten , Henryk Jan Komorowski , Arne K. Sandvik , Astrid Lægreid Predicting Gene Function from Gene Expressions and Ontologies. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:299-310 [Conf ] W. S. Martins , Juan del Cuvillo , F. J. Useche , Kevin B. Theobald , Guang R. Gao A Multithreaded Parallel Implementation of a Dynamic Programming Algorithm for Sequence Comparison. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:311-322 [Conf ] Eric Rice , Richard Hughey Molecular Fingerprinting on the SIMD Parallel Processor Kestrel. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:323-334 [Conf ] R. Sásik , Terence Hwa , N. Iranfar , W. F. Loomis Percolation Clustering: A Novel Algorithm Applied to the Clustering of Gene Expression Patterns in Dictyostelium Development. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:335-347 [Conf ] Rimli Sengupta , Martin Tompa Quality Control in Manufacturing Oligo Arrays: A Combinatorial Design Approach. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:348-359 [Conf ] Allison Waugh , Glenn A. Williams , Liping Wei , Russ B. Altman Using Metacomputing Tools to Facilitate Large Scale Analyses of Biological Databases. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:360-371 [Conf ] Jun-ichi Tsujii , Limsoon Wong Natural Language Processing for Biology - Session Introduction. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:372-373 [Conf ] Jeffrey T. Chang , Soumya Raychaudhuri , Russ B. Altman Including Biological Literature Improves Homology Search. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:374-383 [Conf ] Ioannis Iliopoulos , Anton J. Enright , Christos A. Ouzounis TEXTQUEST: Document Clustering of MEDLINE Abstracts For Concept Discovery In Molecular Biology. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:384-395 [Conf ] Jong C. Park , Hyun Sook Kim , Jung-jae Kim Bidirectional Incremental Parsing for Automatic Pathway Identification with Combinatory Categorial Grammar. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:396-407 [Conf ] Akane Yakushiji , Yuka Tateisi , Yusuke Miyao , Jun-ichi Tsujii Event Extraction from Biomedical Papers Using a Full Parser. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:408-419 [Conf ] Peter D. Karp , Eric P. Neumann , Pedro Romero Genome, Pathway and Interaction Bioinformatics - Session Introduction. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:420-421 [Conf ] Alexander J. Hartemink , David K. Gifford , Tommi Jaakkola , Richard A. Young Using Graphical Models and Genomic Expression Data to Statistically Validate Models of Genetic Regulatory Networks. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:422-433 [Conf ] John R. Koza , William Mydlowec , Guido Lanza , Jessen Yu , Martin A. Keane Reverse Engineering of Metabolic Pathways from Observed Data Using Genetic Programming. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:434-445 [Conf ] Yukihiro Maki , Daisuke Tominaga , Masahiro Okamoto , Shoji Watanabe , Yukihiro Eguchi Development of a System for the Inference of Large Scale Genetic Networks. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:446-458 [Conf ] Aviv Regev , William Silverman , Ehud Y. Shapiro Representation and Simulation of Biochemical Processes Using the pi-Calculus Process Algebra. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:459-470 [Conf ] Pedro Romero , Peter D. Karp Nutrition-Related Analysis of Pathway/Genome Databases. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:470-482 [Conf ] Matthew Stephens , Mathew J. Palakal , Snehasis Mukhopadhyay , Rajeev R. Raje , Javed Mostafa Detecting Gene Relations from MEDLINE Abstracts. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:483-496 [Conf ] Christine L. Tsien , T. A. Libermann , X. Gu , Isaac S. Kohane On Reporting Fold Differences. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:496-507 [Conf ] Lodewyk F. A. Wessels , Eugene P. van Someren , Marcel J. T. Reinders A Comparison of Genetic Network Models. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:508-519 [Conf ] Limsoon Wong PIES, A Protein Interaction Extraction System. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:520-531 [Conf ] Lingchong You , John Yin Simulating the Growth of Viruses. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:532-543 [Conf ] Jennifer E. Steinbachs , Paul E. Kearney Phylogenetics in the Post-Genomic Era - Session Introduction. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:544-546 [Conf ] Olaf R. P. Bininda-Emonds , S. G. Brady , J. Kim , Michael J. Sanderson Scaling of Accuracy in Extremely Large Phylogenetic Trees. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:547-558 [Conf ] Patricia A. Evans , Harold T. Wareham Exact Algorithms for Computing Pairwise Alignments and 3-Medians From Structure-Annotated Sequences (Extended Abstract). [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:559-570 [Conf ] Junhyong Kim , Benjamin A. Salisbury A Tree Obscured By Vines: Horizontal Gene Transfer and the Median Tree Method of Estimating Species Phylogeny. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:571-582 [Conf ] Bernard M. E. Moret , Stacia K. Wyman , David A. Bader , Tandy Warnow , Mi Yan A New Implmentation and Detailed Study of Breakpoint Analysis. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:583-594 [Conf ] Fengrong Ren , S. Ogishima , Hiroshi Tanaka A New Algorithm for Analysis of Within-Host HIV-1 Evolution. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:595-605 [Conf ] Jennifer E. Steinbachs , Nikolaos V. Schizas , J. W. O. Ballard Efficiencies of Genes and Accuracy of Tree-Building Methods in Recovering a Known Drosophila Genealogy. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2001, pp:606-617 [Conf ]