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Journal of Chemical Information and Modeling
2006, volume: 46, number: 1

  1. Dilip K. Sinha, Subhash C. Basak
    Fourth Indo-U.S. Workshop on Mathematical Chemistry, January 8-12, 2005, Pune, Maharashtra, India. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:1- [Journal]
  2. Matevz Pompe, Milan Randic
    "Anticonnectivity": A Challenge for Structure-Property-Activity Studies. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:2-8 [Journal]
  3. Douglas M. Hawkins, Subhash C. Basak, Jessica J. Kraker, Kevin T. Geiss, Frank A. Witzmann
    Combining Chemodescriptors and Biodescriptors in Quantitative Structure-Activity Relationship Modeling. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:9-16 [Journal]
  4. Om Prakash Pandey, Indira Ghosh
    Developing an Antituberculosis Compounds Database and Data Mining in the Search of a Motif Responsible for the Activity of a Diverse Class of Antituberculosis Agents. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:17-23 [Journal]
  5. Subhash Ajmani, Kamalakar Jadhav, Sudhir A. Kulkarni
    Three-Dimensional QSAR Using the k-Nearest Neighbor Method and Its Interpretation. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:24-31 [Journal]
  6. Marco Pintore, Christophe Wechman, Gilles Sicard, Maurice Chastrette, Nicolas Amaury, Jacques R. Chrétien
    Comparing the Information Content of Two Large Olfactory Databases. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:32-38 [Journal]
  7. Philip Prathipati, Anil K. Saxena
    Evaluation of Binary QSAR Models Derived from LUDI and MOE Scoring Functions for Structure Based Virtual Screening. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:39-51 [Journal]
  8. Yenamandra S. Prabhakar, Krishnan Balasubramanian
    A Simple Algorithm for Unique Representation of Chemical Structures-Cyclic/Acyclic Functionalized Achiral Molecules. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:52-56 [Journal]
  9. Milan Randic, Alexandru T. Balaban
    Partitioning of pi-Electrons in Rings for Clar Structures of Benzenoid Hydrocarbons. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:57-64 [Journal]
  10. Subhash C. Basak, Ramanathan Natarajan, Denise R. Mills, Douglas M. Hawkins, Jessica J. Kraker
    Quantitative Structure-Activity Relationship Modeling of Juvenile Hormone Mimetic Compounds for Culex Pipiens Larvae, with a Discussion of Descriptor-Thinning Methods. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:65-77 [Journal]
  11. Samrat Dutta, Poonam Singhal, Praveen Agrawal, Raju Tomer, Kritee, Ekta Khurana, B. Jayaram
    A Physicochemical Model for Analyzing DNA Sequences. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:78-85 [Journal]
  12. Yenamandra S. Prabhakar, Manish K. Gupta, Nobendu Roy, Yenamandra Venkateswarlu
    A High Dimensional QSAR Study on the Aldose Reductase Inhibitory Activity of Some Flavones: Topological Descriptors in Modeling the Activity. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:86-92 [Journal]
  13. Manish K. Gupta, Yenamandra S. Prabhakar
    Topological Descriptors in Modeling the Antimalarial Activity of 4-(3', 5'-Disubstituted anilino)quinolines. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:93-102 [Journal]
  14. Mamta Thakur, Abhilash Thakur, Krishnan Balasubramanian
    QSAR and SAR Studies on the Reduction of Some Aromatic Nitro Compounds by Xanthine Oxidase. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:103-110 [Journal]
  15. Akbar S. Khan, Cesar V. Mujer, Timothy G. Alefantis, Joseph P. Connolly, Ulrike Beate Mayr, Petra Walcher, Werner Lubitz, Vito G. DelVecchio
    Proteomics and Bioinformatics Strategies to Design Countermeasures against Infectious Threat Agents. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:111-115 [Journal]
  16. Milan Randic, Frank A. Witzmann, Varshna Kodali, Subhash C. Basak
    On the Dependence of a Characterization of Proteomics Maps on the Number of Protein Spots Considered. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:116-122 [Journal]
  17. R. Sathyapriya, K. V. Brinda, Saraswathi Vishveshwara
    Correlation of the Side-Chain Hubs with the Functional Residues in DNA Binding Protein Structures. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:123-129 [Journal]
  18. Marjan Vracko, Subhash C. Basak, Kevin T. Geiss, Frank A. Witzmann
    Proteomic Maps-Toxicity Relationship of Halocarbons Studied with Similarity Index and Genetic Algorithm. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:130-136 [Journal]
  19. Yun-De Xiao, Rebecca Harris, Ersin Bayram, Peter Santago II, Jeffrey D. Schmitt
    Supervised Self-Organizing Maps in Drug Discovery. 2. Improvements in Descriptor Selection and Model Validation. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:137-144 [Journal]
  20. Gemma L. Holliday, Peter Murray-Rust, Henry S. Rzepa
    Chemical Markup, XML, and the World Wide Web. 6. CMLReact, an XML Vocabulary for Chemical Reactions. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:145-157 [Journal]
  21. Zsolt Lepp, Takashi Kinoshita, Hiroshi Chuman
    Screening for New Antidepressant Leads of Multiple Activities by Support Vector Machines. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:158-167 [Journal]
  22. Anna Maria Almerico, Marco Tutone, Antonino Lauria, Patrizia Diana, Paola Barraja, Alessandra Montalbano, Girolamo Cirrincione, Gaetano Dattolo
    A Multivariate Analysis of HIV-1 Protease Inhibitors and Resistance Induced by Mutation. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:168-179 [Journal]
  23. Robert P. Sheridan, Peter Hunt, J. Christopher Culberson
    Molecular Transformations as a Way of Finding and Exploiting Consistent Local QSAR. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:180-192 [Journal]
  24. Meir Glick, Jeremy L. Jenkins, James H. Nettles, Hamilton Hitchings, John W. Davies
    Enrichment of High-Throughput Screening Data with Increasing Levels of Noise Using Support Vector Machines, Recursive Partitioning, and Laplacian-Modified Naive Bayesian Classifiers. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:193-200 [Journal]
  25. Andrew Smellie, Christopher J. Wilson, Shi Chung Ng
    Visualization and Interpretation of High Content Screening Data. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:201-207 [Journal]
  26. Nikolaus Stiefl, Ian A. Watson, Knut Baumann, Andrea Zaliani
    ErG: 2D Pharmacophore Descriptions for Scaffold Hopping. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:208-220 [Journal]
  27. Shinji Amari, Masahiro Aizawa, Junwei Zhang, Kaori Fukuzawa, Yuji Mochizuki, Yoshio Iwasawa, Kotoko Nakata, Hiroshi Chuman, Tatsuya Nakano
    VISCANA: Visualized Cluster Analysis of Protein-Ligand Interaction Based on the ab Initio Fragment Molecular Orbital Method for Virtual Ligand Screening. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:221-230 [Journal]
  28. Matthew Clark, Frank Guarnieri, Igor Shkurko, Jeff Wiseman
    Grand Canonical Monte Carlo Simulation of Ligand-Protein Binding. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:231-242 [Journal]
  29. Niu Huang, Chakrapani Kalyanaraman, John J. Irwin, Matthew P. Jacobson
    Physics-Based Scoring of Protein-Ligand Complexes: Enrichment of Known Inhibitors in Large-Scale Virtual Screening. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:243-253 [Journal]
  30. Philippe Ferrara, Alessandro Curioni, Eric Vangrevelinghe, T. Meyer, Tiziana Mordasini, Wanda Andreoni, Pierre Acklin, Edgar Jacoby
    New Scoring Functions for Virtual Screening from Molecular Dynamics Simulations with a Quantum-Refined Force-Field (QRFF-MD). Application to Cyclin-Dependent Kinase 2. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:254-263 [Journal]
  31. Orazio Nicolotti, Angelo Carotti
    QSAR and QSPR Studies of a Highly Structured Physicochemical Domain. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:264-276 [Journal]
  32. J. Christian Baber, William A. Shirley, Yinghong Gao, Miklos Feher
    The Use of Consensus Scoring in Ligand-Based Virtual Screening. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:277-288 [Journal]
  33. Prabha Garg, Jitender Verma
    In Silico Prediction of Blood Brain Barrier Permeability: An Artificial Neural Network Model. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:289-297 [Journal]
  34. Sung Jin Cho, Yaxiong Sun
    FLAME: A Program to Flexibly Align Molecules. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:298-306 [Journal]
  35. Douglas J. Klein, Alexandru T. Balaban
    The Eight Classes of Positive-Curvature Graphitic Nanocones. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:307-320 [Journal]
  36. Debojyoti Dutta, Rajarshi Guha, Peter C. Jurs, Ting Chen
    Scalable Partitioning and Exploration of Chemical Spaces Using Geometric Hashing. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:321-333 [Journal]
  37. Debra L. Bautista, Deanna H. Morris, Lauren Stein, Wesley Asher, Timothy Hammitt
    A Two Model Receptor System of the Alpha1D Adrenergic Receptor To Describe Interactions with Epinephrine and BMY7378. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:334-344 [Journal]
  38. Osvaldo Andrade Santos-Filho, Anton J. Hopfinger
    Structure-Based QSAR Analysis of a Set of 4-Hydroxy-5, 6-dihydropyrones as Inhibitors of HIV-1 Protease: An Application of the Receptor-Dependent (RD) 4D-QSAR Formalism. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:345-354 [Journal]
  39. Shane D. Peterson, Wesley Schaal, Anders Karlén
    Improved CoMFA Modeling by Optimization of Settings. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:355-364 [Journal]
  40. Visvaldas Kairys, Miguel X. Fernandes, Michael K. Gilson
    Screening Drug-Like Compounds by Docking to Homology Models: A Systematic Study. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:365-379 [Journal]
  41. Akifumi Oda, Keiichi Tsuchida, Tadakazu Takakura, Noriyuki Yamaotsu, Shuichi Hirono
    Comparison of Consensus Scoring Strategies for Evaluating Computational Models of Protein-Ligand Complexes. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:380-391 [Journal]
  42. Minghu Song, Matthew Clark
    Development and Evaluation of an in Silico Model for hERG Binding. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:392-400 [Journal]
  43. Hongming Chen, Paul D. Lyne, Fabrizio Giordanetto, Timothy Lovell, Jin Li
    On Evaluating Molecular-Docking Methods for Pose Prediction and Enrichment Factors. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:401-415 [Journal]
  44. Tomasz Arodz, David A. Yuen, Arkadiusz Z. Dudek
    Ensemble of Linear Models for Predicting Drug Properties. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:416-423 [Journal]
  45. Dirk Neumann, Oliver Kohlbacher, Christian Merkwirth, Thomas Lengauer
    A Fully Computational Model for Predicting Percutaneous Drug Absorption. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:424-429 [Journal]
  46. Anders Wallqvist, Ruili Huang, Narmada Thanki, David G. Covell
    Evaluating Chemical Structure Similarity as an Indicator of Cellular Growth Inhibition. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:430-437 [Journal]
  47. Vicky Choi
    On Updating Torsion Angles of Molecular Conformations. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:438-444 [Journal]
  48. L. Y. Han, H. H. Lin, Z. R. Li, C. J. Zheng, Z. W. Cao, B. Xie, Y. Z. Chen
    PEARLS: Program for Energetic Analysis of Receptor-Ligand System. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Modeling, 2006, v:46, n:1, pp:445-450 [Journal]
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