Journals in DBLP
Kevin Truong , Mitsuhiko Ikura Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model approach. [Citation Graph (0, 0)][DBLP ] Journal ] Jamie J. Cannone , Sankar Subramanian , Murray N. Schnare , James R. Collett , Lisa M. D'Souza , Yushi Du , Brian Feng , Nan Lin , Lakshmi V. Madabusi , Kirsten M. Müller , Nupur Pande , Zhidi Shang , Nan Yu , Robin Ray Gutell The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. [Citation Graph (0, 0)][DBLP ] Journal ] Yingyao Zhou , Ruben Abagyan Match-Only Integral Distribution (MOID) Algorithm for high-density oligonucleotide array analysis. [Citation Graph (0, 0)][DBLP ] Journal ] Stéphanie Bocs , Antoine Danchin , Claudine Médigue Re-annotation of genome microbial CoDing-Sequences: finding new genes and inaccurately annotated genes. [Citation Graph (0, 0)][DBLP ] Journal ] Jonas S. Almeida , Susana Vinga Universal sequence map (USM) of arbitrary discrete sequences. [Citation Graph (0, 0)][DBLP ] Journal ] Michele Caselle , Ferdinando Di Cunto , Paolo Provero Correlating overrepresented upstream motifs to gene expression: a computational approach to regulatory element discovery in eukaryotes. [Citation Graph (0, 0)][DBLP ] Journal ] Harry Mangalam tacg - a grep for DNA. [Citation Graph (0, 0)][DBLP ] Journal ] Alexander E. Pozhitkov , Diethard Tautz An algorithm and program for finding sequence specific oligo-nucleotide probes for species identification. [Citation Graph (0, 0)][DBLP ] Journal ] Janusz M. Bujnicki , Leszek Rychlewski RNA: (guanine-N2) methyltransferases RsmC/RsmD and their homologs revisited - bioinformatic analysis and prediction of the active site based on the uncharacterized Mj0882 protein structure. [Citation Graph (0, 0)][DBLP ] Journal ] Andreas Karwath , Ross D. King Homology Induction: the use of machine learning to improve sequence similarity searches. [Citation Graph (0, 0)][DBLP ] Journal ] Nikhat Zafar , Raja Mazumder , Donald Seto CoreGenes: A computational tool for identifying and cataloging "core" genes in a set of small genomes. [Citation Graph (0, 0)][DBLP ] Journal ] Michel Dumontier , Christopher W. V. Hogue NBLAST: a cluster variant of BLAST for NxN comparisons. [Citation Graph (0, 0)][DBLP ] Journal ] Christian M. Zmasek , Sean R. Eddy RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs. [Citation Graph (0, 0)][DBLP ] Journal ] Jamie J. Cannone , Sankar Subramanian , Murray N. Schnare , James R. Collett , Lisa M. D'Souza , Yushi Du , Brian Feng , Nan Lin , Lakshmi V. Madabusi , Kirsten M. Müller , Nupur Pande , Zhidi Shang , Nan Yu , Robin Ray Gutell The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs: Correction. [Citation Graph (0, 0)][DBLP ] Journal ] Yong-Chuan Tao , Rudolph L. Leibel Identifying functional relationships among human genes by systematic analysis of biological literature. [Citation Graph (0, 0)][DBLP ] Journal ] David M. Mutch , Alvin Berger , Robert Mansourian , Andreas Rytz , Matthew-Alan Roberts The limit fold change model: A practical approach for selecting differentially expressed genes from microarray data. [Citation Graph (0, 0)][DBLP ] Journal ] Sean R. Eddy A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure. [Citation Graph (0, 0)][DBLP ] Journal ] Ann E. Loraine , Gregg A. Helt Visualizing the genome: techniques for presenting human genome data and annotations. [Citation Graph (0, 0)][DBLP ] Journal ] Doron Betel , Christopher W. V. Hogue Kangaroo - A pattern-matching program for biological sequences. [Citation Graph (0, 0)][DBLP ] Journal ] Alex Bateman The SGS3 protein involved in PTGS finds a family. [Citation Graph (0, 0)][DBLP ] Journal ] Ravi Kothapalli , Sean J. Yoder , Shrikant Mane , Thomas P. Loughran Jr Microarray results: how accurate are they? [Citation Graph (0, 0)][DBLP ] Journal ] Stephen Welle , Andrew I. Brooks , Charles A. Thornton Computational method for reducing variance with Affymetrix microarrays. [Citation Graph (0, 0)][DBLP ] Journal ] Sean D. Mooney , Teri E. Klein The functional importance of disease-associated mutation. [Citation Graph (0, 0)][DBLP ] Journal ] Pierre Dönnes , Arne Elofsson Prediction of MHC class I binding peptides, using SVMHC. [Citation Graph (0, 0)][DBLP ] Journal ] Michael A. Gieseg , Theresa Cody , Michael Z. Man , Steven J. Madore , Mark A. Rubin , Eric P. Kaldjian Expression profiling of human renal carcinomas with functional taxonomic analysis. [Citation Graph (0, 0)][DBLP ] Journal ] Hao Chen , Burt M. Sharp Oliz, a suite of Perl scripts that assist in the design of microarrays using 50mer oligonucleotides from the 3' untranslated region. [Citation Graph (0, 0)][DBLP ] Journal ] John Schwacke , Jonas S. Almeida Efficient Boolean implementation of universal sequence maps (bUSM). [Citation Graph (0, 0)][DBLP ] Journal ] Christoph K. Wierling , Matthias Steinfath , Thorsten Elge , Steffen Schulze-Kremer , Pia Aanstad , Matthew Clark , Hans Lehrach , Ralf Herwig Simulation of DNA array hybridization experiments and evaluation of critical parameters during subsequent image and data analysis. [Citation Graph (0, 0)][DBLP ] Journal ] Nikolaus Rajewsky , Massimo Vergassola , Ulrike Gaul , Eric D. Siggia Computational detection of genomic cis- regulatory modules applied to body patterning in the early Drosophila embryo. [Citation Graph (0, 0)][DBLP ] Journal ] Katerina Michalickova , Gary D. Bader , Michel Dumontier , Hao Lieu , Doron Betel , Ruth Isserlin , Christopher W. V. Hogue SeqHound: biological sequence and structure database as a platform for bioinformatics research. [Citation Graph (0, 0)][DBLP ] Journal ] Rehannah H. A. Borup , Stefano Toppo , Yi-Wen Chen , Tanya M. Teslovich , Gerolamo Lanfranchi , Giorgio Valle , Eric P. Hoffman Development and production of an oligonucleotide MuscleChip: use for validation of ambiguous ESTs. [Citation Graph (0, 0)][DBLP ] Journal ] Martin Steffen , Allegra Petti , John Aach , Patrik D'haeseleer , George M. Church Automated modelling of signal transduction networks. [Citation Graph (0, 0)][DBLP ] Journal ] Mark D. Robinson , Jörg Grigull , Naveed Mohammad , Timothy R. Hughes FunSpec: a web-based cluster interpreter for yeast. [Citation Graph (0, 0)][DBLP ] Journal ] Junbai Wang , Jan Delabie , Hans Christian Aasheim , Erlend Smeland , Ola Myklebost Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study. [Citation Graph (0, 0)][DBLP ] Journal ] Catherine H. Schein , Numan Özgün , Tadahide Izumi , Werner Braun Total sequence decomposition distinguishes functional modules, "molegos" in apurinic/apyrimidinic endonucleases. [Citation Graph (0, 0)][DBLP ] Journal ] Lan Ma , Pablo A. Iglesias Quantifying robustness of biochemical network models. [Citation Graph (0, 0)][DBLP ] Journal ] Michel Dumontier , Katerina Michalickova , Christopher W. V. Hogue Species-specific protein sequence and fold optimizations. [Citation Graph (0, 0)][DBLP ] Journal ] Konrad Büssow , Steve Hoffmann , Volker Sievert ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files. 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