Journals in DBLP
Zhenjun Hu , Martin C. Frith , Tianhua Niu , Zhiping Weng SeqVISTA: a graphical tool for sequence feature visualization and comparison. [Citation Graph (0, 0)][DBLP ] Journal ] Gary D. Bader , Christopher W. V. Hogue An automated method for finding molecular complexes in large protein interaction networks. [Citation Graph (0, 0)][DBLP ] Journal ] Peisen Zhang , Huitao Sheng , Alfredo Morabia , T. Conrad Gilliam Optimal Step Length EM Algorithm (OSLEM) for the estimation of haplotype frequency and its application in lipoprotein lipase genotyping. [Citation Graph (0, 0)][DBLP ] Journal ] Jutta Bradtke , Harald Balz , Christa Fonatsch , Barbara Heinze , Anna Jauch , Brigitte Mohr , Claudia Schoch , Harald Rieder Computer aided analysis of additional chromosome aberrations in Philadelphia chromosome positive acute lymphoblastic leukaemia using a simplified computer readable cytogenetic notation. [Citation Graph (0, 0)][DBLP ] Journal ] Francisco Azuaje Genomic data sampling and its effect on classification performance assessment. [Citation Graph (0, 0)][DBLP ] Journal ] Nelson D. Young , John Healy GapCoder automates the use of indel characters in phylogenetic analysis. [Citation Graph (0, 0)][DBLP ] Journal ] Yan Hong , Aaron Chuah A format for databasing and comparison of AFLP fingerprint profiles. [Citation Graph (0, 0)][DBLP ] Journal ] Marco Berrera , Henriette Molinari , Federico Fogolari Amino acid empirical contact energy definitions for fold recognition in the space of contact maps. [Citation Graph (0, 0)][DBLP ] Journal ] Michal A. Kurowski , Joanna M. Sasin , Marcin Feder , Janusz Debski , Janusz M. Bujnicki Characterization of the cofactor-binding site in the SPOUT-fold methyltransferases by computational docking of S -adenosylmethionine to three crystal structures. [Citation Graph (0, 0)][DBLP ] Journal ] Korbinian Strimmer Modeling gene expression measurement error: a quasi-likelihood approach. [Citation Graph (0, 0)][DBLP ] Journal ] Charles C. Kim , Stanley Falkow Significance analysis of lexical bias in microarray data. [Citation Graph (0, 0)][DBLP ] Journal ] Michael C. O'Neill , Li Song Neural network analysis of lymphoma microarray data: prognosis and diagnosis near-perfect. [Citation Graph (0, 0)][DBLP ] Journal ] Josephine Hoh , Fumihiko Matsuda , Xu Peng , Daniela Markovic , Mark G. Lathrop , Jürg Ott SNP haplotype tagging from DNA pools of two individuals. [Citation Graph (0, 0)][DBLP ] Journal ] Jacques Rougemont , Pascal Hingamp DNA microarray data and contextual analysis of correlation graphs. [Citation Graph (0, 0)][DBLP ] Journal ] Kevin Truong , Mitsuhiko Ikura Domain fusion analysis by applying relational algebra to protein sequence and domain databases. [Citation Graph (0, 0)][DBLP ] Journal ] David J. Studholme , Neil D. Rawlings , Alan J. Barrett , Alex Bateman A comparison of Pfam and MEROPS: Two databases, one comprehensive, and one specialised. [Citation Graph (0, 0)][DBLP ] Journal ] Michael M. Mwangi , Eric D. Siggia Genome wide identification of regulatory motifs in Bacillus subtilis. [Citation Graph (0, 0)][DBLP ] Journal ] Hemant J. Purohit , Dhananjay V. Raje , A. Kapley Identification of signature and primers specific to genus Pseudomonas using mismatched patterns of 16S rDNA sequences. [Citation Graph (0, 0)][DBLP ] Journal ] Parantu K. Shah , Carolina Perez-Iratxeta , Peer Bork , Miguel A. Andrade Information extraction from full text scientific articles: Where are the keywords? [Citation Graph (0, 0)][DBLP ] Journal ] Thomas Schou Larsen , Anders Krogh EasyGene - a prokaryotic gene finder that ranks ORFs by statistical significance. [Citation Graph (0, 0)][DBLP ] Journal ] Jeff W. Bizzaro , Kenneth A. Marx Poly: a quantitative analysis tool for simple sequence repeat (SSR) tracts in DNA. [Citation Graph (0, 0)][DBLP ] Journal ] Gautam Aggarwal , E. A. Worthey , Paul D. McDonagh , Peter J. Myler Importing statistical measures into Artemis enhances gene identification in the Leishmania genome project. [Citation Graph (0, 0)][DBLP ] Journal ] James M. Sorace , Min Zhan A data review and re-assessment of ovarian cancer serum proteomic profiling. [Citation Graph (0, 0)][DBLP ] Journal ] Ramana V. Davuluri , Hao Sun , Saranyan K. Palaniswamy , Nicole Matthews , Carlos Molina , Mike Kurtz , Erich Grotewold AGRIS: Arabidopsis Gene Regulatory Information Server, an information resource of Arabidopsis cis -regulatory elements and transcription factors. [Citation Graph (0, 0)][DBLP ] Journal ] Xuejun Peng , Constance L. Wood , Eric M. Blalock , Kuey Chu Chen , Philip W. Landfield , Arnold J. Stromberg Statistical implications of pooling RNA samples for microarray experiments. [Citation Graph (0, 0)][DBLP ] Journal ] Ashish Nimgaonkar , Despina Sanoudou , Atul J. Butte , Judith N. Haslett , Louis M. Kunkel , Alan H. Beggs , Isaac S. Kohane Reproducibility of gene expression across generations of Affymetrix microarrays. [Citation Graph (0, 0)][DBLP ] Journal ] Marylyn D. Ritchie , Bill C. White , Joel S. Parker , Lance W. Hahn , Jason H. Moore Optimizationof neural network architecture using genetic programming improvesdetection and modeling of gene-gene interactions in studies of humandiseases. [Citation Graph (0, 0)][DBLP ] Journal ] James J. Campanella , Ledion Bitincka , John Smalley MatGAT: An application that generates similarity/identity matrices using protein or DNA sequences. [Citation Graph (0, 0)][DBLP ] Journal ] Robert M. Hubley , Eckart Zitzler , Jared C. Roach Evolutionary algorithms for the selection of single nucleotide polymorphisms. [Citation Graph (0, 0)][DBLP ] Journal ] S. Blair Hedges , Prachi Shah Comparison of mode estimation methods and application in molecular clock analysis. [Citation Graph (0, 0)][DBLP ] Journal ] Patrick J. Killion , Gavin Sherlock , Vishwanath R. Iyer The Longhorn Array Database (LAD): An Open-Source, MIAME compliant implementation of the Stanford Microarray Database (SMD). [Citation Graph (0, 0)][DBLP ] Journal ] Taesung Park , Sung-Gon Yi , Sung-Hyun Kang , Seung Yeoun Lee , Yong-Sung Lee , Richard Simon Evaluation of normalization methods for microarray data. [Citation Graph (0, 0)][DBLP ] Journal ] Boris E. Shakhnovich , John M. Harvey , Steve Comeau , David Lorenz , Charles DeLisi , Eugene I. Shakhnovich ELISA: Structure-Function Inferences based on statistically significant and evolutionarily inspired observations. [Citation Graph (0, 0)][DBLP ] Journal ] Steven B. Cannon , Nevin D. Young OrthoParaMap: Distinguishing orthologs from paralogs by integrating comparative genome data and gene phylogenies. [Citation Graph (0, 0)][DBLP ] Journal ] Mark Smolkin , Debashis Ghosh Cluster stability scores for microarray data in cancer studies. [Citation Graph (0, 0)][DBLP ] Journal ] Hanga C. Galfalvy , Loubna Erraji-Benchekroun , Peggy Smyrniotopoulos , Paul Pavlidis , Steven P. Ellis , J. John Mann , Etienne Sibille , Victoria Arango Sex genes for genomic analysis in human brain: internal controls for comparison of probe level data extraction. [Citation Graph (0, 0)][DBLP ] Journal ] Sashidhar Gadiraju , Carrie A. Vyhlidal , J. Steven Leeder , Peter K. Rogan Genome-wide prediction, display and refinement of binding sites with information theory-based models. [Citation Graph (0, 0)][DBLP ] Journal ] Coral del Val , Karl-Heinz Glatting , Sándor Suhai cDNA2Genome: A tool for mapping and annotating cDNAs. [Citation Graph (0, 0)][DBLP ] Journal ] Sven Bilke , Thomas Breslin , Mikael Sigvardsson Probabilistic estimation of microarray data reliability and underlying gene expression. [Citation Graph (0, 0)][DBLP ] Journal ] Roman L. Tatusov , Natalie D. Fedorova , John D. Jackson , Aviva R. Jacobs , Boris Kiryutin , Eugene V. Koonin , Dmitri M. Krylov , Raja Mazumder , Sergei L. Mekhedov , Anastasia N. Nikolskaya , B. Sridhar Rao , Sergei Smirnov , Alexander V. Sverdlov , Sona Vasudevan , Yuri I. Wolf , Jodie J. Yin , Darren A. Natale The COG database: an updated version includes eukaryotes. [Citation Graph (0, 0)][DBLP ] Journal ] Soren Prag , Josephine C. Adams Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals. [Citation Graph (0, 0)][DBLP ] Journal ] Yee Leng Yap , Xue Wu Zhang , Antoine Danchin Relationship of SARS-CoV to other pathogenic RNA viruses explored by tetranucleotide usage profiling. [Citation Graph (0, 0)][DBLP ] Journal ] Robert J. Klein , Sean R. Eddy RSEARCH: Finding homologs of single structured RNA sequences. [Citation Graph (0, 0)][DBLP ] Journal ] Marcin Grynberg , Lukasz Jaroszewski , Adam Godzik Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization. [Citation Graph (0, 0)][DBLP ] Journal ] G. P. S. Raghava , Stephen M. J. Searle , Patrick C. Audley , Jonathan D. Barber , Geoffrey J. Barton OXBench: A benchmark for evaluation of protein multiple sequence alignment accuracy. [Citation Graph (0, 0)][DBLP ] Journal ] Samuel Kaski , Janne Nikkilä , Merja Oja , Jarkko Venna , Petri Törönen , Eero Castrén Trustworthiness and metrics in visualizing similarity of gene expression. [Citation Graph (0, 0)][DBLP ] Journal ] Alex Bateman , Valerie A. Kickhoefer The TROVE module: A common element in Telomerase, Ro and Vault ribonucleoproteins. [Citation Graph (0, 0)][DBLP ] Journal ] Evan Keibler , Michael R. Brent Eval: A software package for analysis of genome annotations. [Citation Graph (0, 0)][DBLP ] Journal ] Scott D. Zuyderduyn , Steven J. M. Jones A knowledge discovery object model API for Java. [Citation Graph (0, 0)][DBLP ] Journal ] Michael J. Wise LEAping to conclusions: A computational reanalysis of late embryogenesis abundant proteins and their possible roles. [Citation Graph (0, 0)][DBLP ] Journal ] Georgios S. Vernikos , Christos G. Gkogkas , Vassilis J. Promponas , Stavros J. Hamodrakas GeneViTo: Visualizing gene-product functional and structural features in genomic datasets. [Citation Graph (0, 0)][DBLP ] Journal ] Cesare Furlanello , Maria Serafini , Stefano Merler , Giuseppe Jurman Entropy-based gene ranking without selection bias for the predictive classification of microarray data. [Citation Graph (0, 0)][DBLP ] Journal ] Stefan Washietl , Frank Eisenhaber Reannotation of the CELO genome characterizes a set of previously unassigned open reading frames and points to novel modes of host interaction in avian adenoviruses. [Citation Graph (0, 0)][DBLP ] Journal ] Deyun Pan , Ning Sun , Kei-Hoi Cheung , Zhong Guan , Ligeng Ma , Matthew Holford , Xingwang Deng , Hongyu Zhao PathMAPA: a tool for displaying gene expression and performing statistical tests on metabolic pathways at multiple levels for Arabidopsis . [Citation Graph (0, 0)][DBLP ] Journal ] Eldon Emberly , Nikolaus Rajewsky , Eric D. Siggia Conservation of regulatory elements between two species of Drosophila. [Citation Graph (0, 0)][DBLP ] Journal ] Thorsten Pöschel , Cornelius Frömmel , Christoph Gille Online tool for the discrimination of equi-distributions. [Citation Graph (0, 0)][DBLP ] Journal ] Aedín C. Culhane , Guy Perrière , Desmond G. Higgins Cross-platform comparison and visualisation of gene expression data using co-inertia analysis. [Citation Graph (0, 0)][DBLP ] Journal ] Junbai Wang , Trond Hellem Bø , Inge Jonassen , Ola Myklebost , Eivind Hovig Tumor classification and marker gene prediction by feature selection and fuzzy c-means clustering using microarray data. [Citation Graph (0, 0)][DBLP ] Journal ] Kevin G. Becker , Douglas A. Hosack , Glynn Dennis Jr. , Richard A. Lempicki , Tiffani J. Bright , Chris Cheadle , James Engel PubMatrix: a tool for multiplex literature mining. [Citation Graph (0, 0)][DBLP ] Journal ] Mark A. Levenstien , Yaning Yang , Jürg Ott Statistical significance for hierarchical clustering in genetic association and microarray expression studies. [Citation Graph (0, 0)][DBLP ] Journal ] Elarbi Badidi , Cristina deSousa , B. Franz Lang , Gertraud Burger AnaBench: a Web/CORBA-based workbench for biomolecular sequence analysis. [Citation Graph (0, 0)][DBLP ] Journal ] Anna G. Nazina , Dmitri A. Papatsenko Statistical extraction of Drosophila cis -regulatory modules using exhaustive assessment of local word frequency. [Citation Graph (0, 0)][DBLP ] Journal ] Michael Brudno , Michael Chapman , Berthold Göttgens , Serafim Batzoglou , Burkhard Morgenstern Fast and sensitive multiple alignment of large genomic sequences. [Citation Graph (0, 0)][DBLP ] Journal ] 