Journals in DBLP

Bioinformatics
2009, volume: 25, number: 12

1. 
   Editorial. [Citation Graph (, )][DBLP]
   
   
2. 
   REPETITA: detection and discrimination of the periodicity of protein solenoid repeats by discrete Fourier transform. [Citation Graph (, )][DBLP]
   
   
3. 
   PICKY: a novel SVD-based NMR spectra peak picking method. [Citation Graph (, )][DBLP]
   
   
4. 
   Network-based prediction of metabolic enzymes' subcellular localization. [Citation Graph (, )][DBLP]
   
   
5. 
   DISCOVER: a feature-based discriminative method for motif search in complex genomes. [Citation Graph (, )][DBLP]
   
   
6. 
   A unified statistical model to support local sequence order independent similarity searching for ligand-binding sites and its application to genome-based drug discovery. [Citation Graph (, )][DBLP]
   
   
7. 
   Toward a gold standard for promoter prediction evaluation. [Citation Graph (, )][DBLP]
   
   
8. 
   Domain-oriented edge-based alignment of protein interaction networks. [Citation Graph (, )][DBLP]
   
   
9. 
   Modeling stochasticity and robustness in gene regulatory networks. [Citation Graph (, )][DBLP]
   
   
10. 
    Identifying novel constrained elements by exploiting biased substitution patterns. [Citation Graph (, )][DBLP]
    
    
11. 
    Speeding up HMM algorithms for genetic linkage analysis via chain reductions of the state space. [Citation Graph (, )][DBLP]
    
    
12. 
    Efficient exact motif discovery. [Citation Graph (, )][DBLP]
    
    
13. 
    A framework to refine particle clusters produced by EMAN. [Citation Graph (, )][DBLP]
    
    
14. 
    Graph theoretical approach to study eQTL: a case study of Plasmodium falciparum. [Citation Graph (, )][DBLP]
    
    
15. 
    Clustered alignments of gene-expression time series data. [Citation Graph (, )][DBLP]
    
    
16. 
    Predictions of RNA secondary structure by combining homologous sequence information. [Citation Graph (, )][DBLP]
    
    
17. 
    Family classification without domain chaining. [Citation Graph (, )][DBLP]
    
    
18. 
    A geometric approach for classification and comparison of structural variants. [Citation Graph (, )][DBLP]
    
    
19. 
    KELLER: estimating time-varying interactions between genes. [Citation Graph (, )][DBLP]
    
    
20. 
    Probabilistic retrieval and visualization of biologically relevant microarray experiments. [Citation Graph (, )][DBLP]
    
    
21. 
    Fewer permutations, more accurate P-values. [Citation Graph (, )][DBLP]
    
    
22. 
    Joint estimation of gene conversion rates and mean conversion tract lengths from population SNP data. [Citation Graph (, )][DBLP]
    
    
23. 
    E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs. [Citation Graph (, )][DBLP]
    
    
24. 
    Multi-locus match probability in a finite population: a fundamental difference between the Moran and Wright-Fisher models. [Citation Graph (, )][DBLP]
    
    
25. 
    A Classifier-based approach to identify genetic similarities between diseases. [Citation Graph (, )][DBLP]
    
    
26. 
    Pokefind: a novel topological filter for use with protein structure prediction. [Citation Graph (, )][DBLP]
    
    
27. 
    Predicting and understanding the stability of G-quadruplexes. [Citation Graph (, )][DBLP]
    
    
28. 
    Constrained mixture estimation for analysis and robust classification of clinical time series. [Citation Graph (, )][DBLP]
    
    
29. 
    Model-based clustering of array CGH data. [Citation Graph (, )][DBLP]
    
    
30. 
    IsoRankN: spectral methods for global alignment of multiple protein networks. [Citation Graph (, )][DBLP]
    
    
31. 
    A multivariate regression approach to association analysis of a quantitative trait network. [Citation Graph (, )][DBLP]
    
    
32. 
    Ontology quality assurance through analysis of term transformations. [Citation Graph (, )][DBLP]
    
    
33. 
    Predicting functionality of protein-DNA interactions by integrating diverse evidence. [Citation Graph (, )][DBLP]
    
    
34. 
    Grouped graphical Granger modeling for gene expression regulatory networks discovery. [Citation Graph (, )][DBLP]
    
    
35. 
    Modeling interactions between adjacent nucleosomes improves genome-wide predictions of nucleosome occupancy. [Citation Graph (, )][DBLP]
    
    
36. 
    Assessing phylogenetic motif models for predicting transcription factor binding sites. [Citation Graph (, )][DBLP]
    
    
37. 
    A general computational method for robustness analysis with applications to synthetic gene networks. [Citation Graph (, )][DBLP]
    
    
38. 
    Alignment of the UMLS semantic network with BioTop: methodology and assessment. [Citation Graph (, )][DBLP]
    
    
39. 
    Proteome coverage prediction with infinite Markov models. [Citation Graph (, )][DBLP]
    
    
40. 
    Viruses selectively mutate their CD8+ T-cell epitopes - a large-scale immunomic analysis. [Citation Graph (, )][DBLP]
    
    
41. 
    From disease ontology to disease-ontology lite: statistical methods to adapt a general-purpose ontology for the test of gene-ontology associations. [Citation Graph (, )][DBLP]
    
    
42. 
    Computing galled networks from real data. [Citation Graph (, )][DBLP]
    
    
43. 
    Global alignment of protein-protein interaction networks by graph matching methods. [Citation Graph (, )][DBLP]
    
    
44. 
    Inference of locus-specific ancestry in closely related populations. [Citation Graph (, )][DBLP]
    
    
45. 
    A partition function algorithm for interacting nucleic acid strands. [Citation Graph (, )][DBLP]
    
    
46. 
    Genotype-phenotype associations: substitution models to detect evolutionary associations between phenotypic variables and genotypic evolutionary rate. [Citation Graph (, )][DBLP]
    
    
47. 
    Prediction of sub-cavity binding preferences using an adaptive physicochemical structure representation. [Citation Graph (, )][DBLP]
    
    
48. 
    Cloud computing. [Citation Graph (, )][DBLP]
    
    
49. 
    Cross species analysis of microarray expression data. [Citation Graph (, )][DBLP]
    
    
50. 
    Gene regulation in the intraerythrocytic cycle of Plasmodium falciparum. [Citation Graph (, )][DBLP]
    
    
51. 
    Protein function annotation from sequence: prediction of residues interacting with RNA. [Citation Graph (, )][DBLP]
    
    
52. 
    A local multiple alignment method for detection of non-coding RNA sequences. [Citation Graph (, )][DBLP]
    
    
53. 
    ModLink+: improving fold recognition by using protein-protein interactions. [Citation Graph (, )][DBLP]
    
    
54. 
    Identification of computational hot spots in protein interfaces: combining solvent accessibility and inter-residue potentials improves the accuracy. [Citation Graph (, )][DBLP]
    
    
55. 
    Enrichment constrained time-dependent clustering analysis for finding meaningful temporal transcription modules. [Citation Graph (, )][DBLP]
    
    
56. 
    A stochastic model for the evolution of metabolic networks with neighbor dependence. [Citation Graph (, )][DBLP]
    
    
57. 
    Bayesian inference of protein-protein interactions from biological literature. [Citation Graph (, )][DBLP]
    
    
58. 
    Application and evaluation of automated semantic annotation of gene expression experiments. [Citation Graph (, )][DBLP]
    
    
59. 
    WebGBrowse - a web server for GBrowse. [Citation Graph (, )][DBLP]
    
    
60. 
    CROC: finding chromosomal clusters in eukaryotic genomes. [Citation Graph (, )][DBLP]
    
    
61. 
    MapView: visualization of short reads alignment on a desktop computer. [Citation Graph (, )][DBLP]
    
    
62. 
    BEsTRF: a tool for optimal resolution of terminal-restriction fragment length polymorphism analysis based on user-defined primer-enzyme-sequence databases. [Citation Graph (, )][DBLP]
    
    
63. 
    BIPA: a database for protein-nucleic acid interaction in 3D structures. [Citation Graph (, )][DBLP]
    
    
64. 
    A graphical algorithm for fast computation of identity coefficients and generalized kinship coefficients. [Citation Graph (, )][DBLP]
    
    
65. 
    Fluctuation AnaLysis CalculatOR: a web tool for the determination of mutation rate using Luria-Delbrück fluctuation analysis. [Citation Graph (, )][DBLP]
    
    
66. 
    ELISA-BASE: an integrated bioinformatics tool for analyzing and tracking ELISA microarray data. [Citation Graph (, )][DBLP]
    
    
67. 
    ProtVirDB: a database of protozoan virulent proteins. [Citation Graph (, )][DBLP]
    
    
68. 
    ISMB/ECCB 2009 Stockholm. [Citation Graph (, )][DBLP]
    
    
69. 
    Edge-based scoring and searching method for identifying condition-responsive protein-protein interaction sub-network. [Citation Graph (, )][DBLP]