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Publications of Author

1. Sebastian Böcker, Zsuzsanna Lipták
   The Money Changing Problem Revisited: Computing the Frobenius Number in Time O(k a₁). [Citation Graph (0, 0)][DBLP]
   COCOON, 2005, pp:965-974 [Conf]
   
2. Sebastian Böcker, Hans-Michael Kaltenbach
   Mass Spectra Alignments and Their Significance. [Citation Graph (0, 0)][DBLP]
   CPM, 2005, pp:429-441 [Conf]
   
3. Sebastian Böcker, Veli Mäkinen
   Combinatorial Approaches for Mass Spectra Recalibration. [Citation Graph (0, 0)][DBLP]
   Computational Proteomics, 2005, pp:- [Conf]
   
4. Sebastian Böcker
   Weighted Sequencing from Compomers: DNA de-novo sequencing from mass spectrometry data in the presence of false negative constraints. [Citation Graph (0, 0)][DBLP]
   German Conference on Bioinformatics, 2004, pp:13-24 [Conf]
   
5. Sebastian Böcker
   SNP and mutation discovery using base-specific cleavage and MALDI-TOF mass spectrometry. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2003, pp:44-53 [Conf]
   
6. Sebastian Böcker, Zsuzsanna Lipták
   Efficient mass decomposition. [Citation Graph (0, 0)][DBLP]
   SAC, 2005, pp:151-157 [Conf]
   
7. Sebastian Böcker
   Sequencing from Compomers: Using Mass Spectrometry for DNA De-Novo Sequencing of 200+ nt. [Citation Graph (0, 0)][DBLP]
   WABI, 2003, pp:476-497 [Conf]
   
8. Sebastian Böcker, Matthias C. Letzel, Zsuzsanna Lipták, Anton Pervukhin
   Decomposing Metabolomic Isotope Patterns. [Citation Graph (0, 0)][DBLP]
   WABI, 2006, pp:12-23 [Conf]
   
9. Sebastian Böcker
   Exponentially many supertrees. [Citation Graph (0, 0)][DBLP]
   Appl. Math. Lett., 2002, v:15, n:7, pp:861-865 [Journal]
   
10. Sebastian Böcker
    Simulating multiplexed SNP discovery rates using base-specific cleavage and mass spectrometry. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:2, pp:5-12 [Journal]
    
11. Sebastian Böcker, David Bryant, Andreas W. M. Dress, Mike A. Steel
    Algorithmic Aspects of Tree Amalgamation. [Citation Graph (0, 0)][DBLP]
    J. Algorithms, 2000, v:37, n:2, pp:522-537 [Journal]
    
12. Sebastian Böcker
    Sequencing from Compomers: Using Mass Spectrometry for DNA de novo Sequencing of 200+ nt. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2004, v:11, n:6, pp:1110-1134 [Journal]
    
13. Sebastian Böcker
    Sequencing from Compomers: The Puzzle. [Citation Graph (0, 0)][DBLP]
    Theory Comput. Syst., 2006, v:39, n:3, pp:455-471 [Journal]
    
14. Alexandra Scherbart, Wiebke Timm, Sebastian Böcker, Tim W. Nattkemper
    Neural Network Approach for Mass Spectrometry Prediction by Peptide Prototyping. [Citation Graph (0, 0)][DBLP]
    ICANN (2), 2007, pp:90-99 [Conf]
    
15. Hans-Michael Kaltenbach, Sebastian Böcker, Sven Rahmann
    Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting. [Citation Graph (0, 0)][DBLP]
    Systems Biology and Computational Proteomics, 2006, pp:29-41 [Conf]
    
16. Sebastian Böcker, Zsuzsanna Lipták
    A Fast and Simple Algorithm for the Money Changing Problem. [Citation Graph (0, 0)][DBLP]
    Algorithmica, 2007, v:48, n:4, pp:413-432 [Journal]
    
17. 
    A Fixed-Parameter Approach for Weighted Cluster Editing. [Citation Graph (, )][DBLP]
    
    
18. 
    Inferring Peptide Composition from Molecular Formulas. [Citation Graph (, )][DBLP]
    
    
19. 
    Determination of Glycan Structure from Tandem Mass Spectra. [Citation Graph (, )][DBLP]
    
    
20. 
    Computing Bond Types in Molecule Graphs. [Citation Graph (, )][DBLP]
    
    
21. 
    Towards de novo identification of metabolites by analyzing tandem mass spectra. [Citation Graph (, )][DBLP]
    
    
22. 
    Maximum line-pair stabbing problem and its variations. [Citation Graph (, )][DBLP]
    
    
23. 
    Improved Mass Spectrometry Peak Intensity Prediction by Adaptive Feature Weighting. [Citation Graph (, )][DBLP]
    
    
24. 
    An Improved Fixed-Parameter Algorithm for Minimum-Flip Consensus Trees. [Citation Graph (, )][DBLP]
    
    
25. 
    A Faster Fixed-Parameter Approach to Drawing Binary Tanglegrams. [Citation Graph (, )][DBLP]
    
    
26. 
    Computation of Median Gene Clusters. [Citation Graph (, )][DBLP]
    
    
27. 
    Annotating Fragmentation Patterns. [Citation Graph (, )][DBLP]
    
    
28. 
    Swiftly Computing Center Strings. [Citation Graph (, )][DBLP]
    
    
29. 
    Exact Algorithms for Cluster Editing: Evaluation and Experiments. [Citation Graph (, )][DBLP]
    
    
30. 
    Polynomial Supertree Methods Revisited. [Citation Graph (, )][DBLP]
    
    
31. 
    Going Weighted: Parameterized Algorithms for Cluster Editing. [Citation Graph (, )][DBLP]
    
    
32. 
    DECOMP - from interpreting Mass Spectrometry peaks to solving the Money Changing Problem. [Citation Graph (, )][DBLP]
    
    
33. 
    EPoS: a modular software framework for phylogenetic analysis. [Citation Graph (, )][DBLP]
    
    
34. 
    SIRIUS: decomposing isotope patterns for metabolite identification. [Citation Graph (, )][DBLP]
    
    
35. 
    SAMPI: Protein Identification with Mass Spectra Alignments. [Citation Graph (, )][DBLP]
    
    
36. 
    Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics. [Citation Graph (, )][DBLP]
    
    
37. 
    On optimal comparability editing with applications to molecular diagnostics. [Citation Graph (, )][DBLP]