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Publications of Author

1. Xiong Liu, Hassan A. Karimi, Lee-Wei Yang, Ivet Bahar
   Protein Functional Motion Query and Visualization. [Citation Graph (0, 0)][DBLP]
   COMPSAC Workshops, 2004, pp:86-89 [Conf]
   
2. Shann-Ching Chen, Ivet Bahar
   Mining frequent patterns in protein structures: a study of protease families. [Citation Graph (0, 0)][DBLP]
   ISMB/ECCB (Supplement of Bioinformatics), 2004, pp:77-85 [Conf]
   
3. Chakra Chennubhotla, Ivet Bahar
   Markov Methods for Hierarchical Coarse-Graining of Large Protein Dynamics. [Citation Graph (0, 0)][DBLP]
   RECOMB, 2006, pp:379-393 [Conf]
   
4. Lee-Wei Yang, Xiong Liu, Christopher Jon Jursa, Mark Holliman, A. J. Rader, Hassan A. Karimi, Ivet Bahar
   iGNM: a database of protein functional motions based on Gaussian Network Model. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:13, pp:2978-2987 [Journal]
   
5. Eran Eyal, Lee-Wei Yang, Ivet Bahar
   Anisotropic network model: systematic evaluation and a new web interface. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:21, pp:2619-2627 [Journal]
   
6. Pemra Doruker, Robert L. Jernigan, Ivet Bahar
   Dynamics of large proteins through hierarchical levels of coarse-grained structures. [Citation Graph (0, 0)][DBLP]
   Journal of Computational Chemistry, 2002, v:23, n:1, pp:119-127 [Journal]
   
7. Lee-Wei Yang, A. J. Rader, Xiong Liu, Christopher Jon Jursa, Shann-Ching Chen, Hassan A. Karimi, Ivet Bahar
   oGNM: online computation of structural dynamics using the Gaussian Network Model. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2006, v:34, n:Web-Server-Issue, pp:24-31 [Journal]
   
8. 
   Anisotropic fluctuations of amino acids in protein structures: insights from X-ray crystallography and elastic network models. [Citation Graph (, )][DBLP]
   
   
9. 
   Rapid assessment of correlated amino acids from pair-to-pair (P2P) substitution matrices. [Citation Graph (, )][DBLP]
   
   
10. 
    Analysis of correlated mutations in HIV-1 protease using spectral clustering. [Citation Graph (, )][DBLP]
    
    
11. 
    Principal component analysis of native ensembles of biomolecular structures (PCA_NEST): insights into functional dynamics. [Citation Graph (, )][DBLP]
    
    
12. 
    Principal component analysis of native ensembles of biomolecular structures (PCA_NEST): insights into functional dynamics. [Citation Graph (, )][DBLP]
    
    
13. 
    Recruitment of rare 3-grams at functional sites: Is this a mechanism for increasing enzyme specificity? [Citation Graph (, )][DBLP]
    
    
14. 
    Topological basis of signal integration in the transcriptional-regulatory network of the yeast, Saccharomyces cerevisiae. [Citation Graph (, )][DBLP]