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Roded Sharan :
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Amir Ben-Dor , Itsik Pe'er , Ron Shamir , Roded Sharan On the Complexity of Positional Sequencing by Hybridization. [Citation Graph (0, 0)][DBLP ] CPM, 1999, pp:88-100 [Conf ] Itsik Pe'er , Ron Shamir , Roded Sharan Incomplete Directed Perfect Phylogeny. [Citation Graph (0, 0)][DBLP ] CPM, 2000, pp:143-153 [Conf ] Roded Sharan , Bjarni V. Halldórsson , Sorin Istrail Islands of Tractability for Parsimony Haplotyping. [Citation Graph (0, 0)][DBLP ] CSB, 2005, pp:65-72 [Conf ] Anya Tsalenko , Roded Sharan , Hege Edvardsen , Vessela Kristensen , Anne-Lise Børresen-Dale , Amir Ben-Dor , Zohar Yakhini Analysis of SNP-Expression Association Matrices. [Citation Graph (0, 0)][DBLP ] CSB, 2005, pp:135-143 [Conf ] Pavol Hell , Ron Shamir , Roded Sharan A Fully Dynamic Algorithm for Recognizing and Representing Proper Interval Graphs. [Citation Graph (0, 0)][DBLP ] ESA, 1999, pp:527-539 [Conf ] Eric P. Xing , Roded Sharan , Michael I. Jordan Bayesian haplo-type inference via the dirichlet process. [Citation Graph (0, 0)][DBLP ] ICML, 2004, pp:- [Conf ] Roded Sharan , Ron Shamir Center CLICK: A Clustering Algorithm with Applications to Gene Expression Analysis. [Citation Graph (0, 0)][DBLP ] ISMB, 2000, pp:307-316 [Conf ] Roded Sharan , Ivan Ovcharenko , Asa Ben-Hur , Richard M. Karp CREME: a framework for identifying cis-regulatory modules in human-mouse conserved segments. [Citation Graph (0, 0)][DBLP ] ISMB (Supplement of Bioinformatics), 2003, pp:283-291 [Conf ] Amos Tanay , Roded Sharan , Ron Shamir Discovering statistically significant biclusters in gene expression data. [Citation Graph (0, 0)][DBLP ] ISMB, 2002, pp:136-144 [Conf ] Roded Sharan , Eugene W. Myers A motif-based framework for recognizing sequence families. [Citation Graph (0, 0)][DBLP ] ISMB (Supplement of Bioinformatics), 2005, pp:387-393 [Conf ] Shaojie Zhang , Ilya Borovok , Yair Aharonowitz , Roded Sharan , Vineet Bafna A sequence-based filtering method for ncRNA identification and its application to searching for riboswitch elements. [Citation Graph (0, 0)][DBLP ] ISMB (Supplement of Bioinformatics), 2006, pp:557-565 [Conf ] Roded Sharan , Avi Wigderson A New NC Algorithm for Perfect Matching in Bipartite Cubic Graphs. [Citation Graph (0, 0)][DBLP ] ISTCS, 1996, pp:202-207 [Conf ] Irit Gat-Viks , Ron Shamir , Richard M. Karp , Roded Sharan Reconstructing Chain Functions in Genetic Networks. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2004, pp:498-509 [Conf ] Roded Sharan , Amir Ben-Dor , Zohar Yakhini Multiplexing Schemes for Generic SNP Genotyping Assays. [Citation Graph (0, 0)][DBLP ] Pacific Symposium on Biocomputing, 2004, pp:140-151 [Conf ] Amir Ben-Dor , Tzvika Hartman , Benno Schwikowski , Roded Sharan , Zohar Yakhini Towards optimally multiplexed applications of universal DNA tag systems. [Citation Graph (0, 0)][DBLP ] RECOMB, 2003, pp:48-56 [Conf ] Jacob Scott , Trey Ideker , Richard M. Karp , Roded Sharan Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks. [Citation Graph (0, 0)][DBLP ] RECOMB, 2005, pp:1-13 [Conf ] Eran Segal , Roded Sharan A discriminative model for identifying spatial cis-regulatory modules. [Citation Graph (0, 0)][DBLP ] RECOMB, 2004, pp:141-149 [Conf ] Roded Sharan , Trey Ideker , Brian P. Kelley , Ron Shamir , Richard M. Karp Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. [Citation Graph (0, 0)][DBLP ] RECOMB, 2004, pp:282-289 [Conf ] Banu Dost , Tomer Shlomi , Nitin Gupta 0002 , Eytan Ruppin , Vineet Bafna , Roded Sharan QNet: A Tool for Querying Protein Interaction Networks. [Citation Graph (0, 0)][DBLP ] RECOMB, 2007, pp:1-15 [Conf ] Assaf Natanzon , Ron Shamir , Roded Sharan A Polynomial Approximation Algorithm for the Minimum Fill-In Problem. [Citation Graph (0, 0)][DBLP ] STOC, 1998, pp:41-47 [Conf ] Itsik Pe'er , Ron Shamir , Roded Sharan On the Generality of Phylogenies from Incomplete Directed Characters. [Citation Graph (0, 0)][DBLP ] SWAT, 2002, pp:358-367 [Conf ] Jens Gramm , Tzvika Hartman , Till Nierhoff , Roded Sharan , Till Tantau On the Complexity of SNP Block Partitioning Under the Perfect Phylogeny Model. [Citation Graph (0, 0)][DBLP ] WABI, 2006, pp:92-102 [Conf ] Tzvika Hartman , Roded Sharan A 1.5-Approximation Algorithm for Sorting by Transpositions and Transreversals. [Citation Graph (0, 0)][DBLP ] WABI, 2004, pp:50-61 [Conf ] Gad Kimmel , Roded Sharan , Ron Shamir Identifying Blocks and Sub-populations in Noisy SNP Data. [Citation Graph (0, 0)][DBLP ] WABI, 2003, pp:303-319 [Conf ] Oleg Rokhlenko , Tomer Shlomi , Roded Sharan , Eytan Ruppin , Ron Y. Pinter Flux-Based vs. Topology-Based Similarity of Metabolic Genes. [Citation Graph (0, 0)][DBLP ] WABI, 2006, pp:274-285 [Conf ] Tal Pupko , Roded Sharan , Masami Hasegawa , Ron Shamir , Dan Graur A Chemical-Distance-Based Test for Positive Darwinian Selection. [Citation Graph (0, 0)][DBLP ] WABI, 2001, pp:142-155 [Conf ] Assaf Natanzon , Ron Shamir , Roded Sharan Complexity Classification of Some Edge Modification Problems. [Citation Graph (0, 0)][DBLP ] WG, 1999, pp:65-77 [Conf ] Ron Shamir , Roded Sharan , Dekel Tsur Cluster Graph Modification Problems. [Citation Graph (0, 0)][DBLP ] WG, 2002, pp:379-390 [Conf ] Irit Gat-Viks , Roded Sharan , Ron Shamir Scoring clustering solutions by their biological relevance. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 2003, v:19, n:18, pp:2381-2389 [Journal ] Roded Sharan , Adi Maron-Katz , Ron Shamir CLICK and EXPANDER: a system for clustering and visualizing gene expression data. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 2003, v:19, n:14, pp:1787-1799 [Journal ] Nir Yosef , Zohar Yakhini , Anya Tsalenko , Vessela Kristensen , Anne-Lise Børresen-Dale , Eytan Ruppin , Roded Sharan A supervised approach for identifying discriminating genotype patterns and its application to breast cancer data. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 2007, v:23, n:2, pp:91-98 [Journal ] Eitan Hirsh , Roded Sharan Identification of conserved protein complexes based on a model of protein network evolution. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 2007, v:23, n:2, pp:170-176 [Journal ] Ron Shamir , Adi Maron-Katz , Amos Tanay , Chaim Linhart , Israel Steinfeld , Roded Sharan , Yosef Shiloh , Ran Elkon EXPANDER - an integrative program suite for microarray data analysis. [Citation Graph (0, 0)][DBLP ] BMC Bioinformatics, 2005, v:6, n:, pp:232- [Journal ] Tomer Shlomi , Daniel Segal , Eytan Ruppin , Roded Sharan QPath: a method for querying pathways in a protein-protein interaction network. [Citation Graph (0, 0)][DBLP ] BMC Bioinformatics, 2006, v:7, n:, pp:199- [Journal ] Assaf Natanzon , Ron Shamir , Roded Sharan Complexity classification of some edge modification problems. [Citation Graph (0, 0)][DBLP ] Discrete Applied Mathematics, 2001, v:113, n:1, pp:109-128 [Journal ] Ron Shamir , Roded Sharan A fully dynamic algorithm for modular decomposition and recognition of cographs. [Citation Graph (0, 0)][DBLP ] Discrete Applied Mathematics, 2004, v:136, n:2-3, pp:329-340 [Journal ] Ron Shamir , Roded Sharan , Dekel Tsur Cluster graph modification problems. [Citation Graph (0, 0)][DBLP ] Discrete Applied Mathematics, 2004, v:144, n:1-2, pp:173-182 [Journal ] Jens Gramm , Till Nierhoff , Roded Sharan , Till Tantau Haplotyping with missing data via perfect path phylogenies. [Citation Graph (0, 0)][DBLP ] Discrete Applied Mathematics, 2007, v:155, n:6-7, pp:788-805 [Journal ] Piotr Berman , Amir Ben-Dor , Itsik Pe'er , Roded Sharan , Ron Shamir On the Complexity of Positional Sequencing by Hybridization [Citation Graph (0, 0)][DBLP ] Electronic Colloquium on Computational Complexity (ECCC), 2001, v:8, n:54, pp:- [Journal ] Gad Kimmel , Roded Sharan , Ron Shamir Computational Problems in Noisy SNP and Haplotype Analysis: Block Scores, Block Identification, and Population Stratification. [Citation Graph (0, 0)][DBLP ] INFORMS Journal on Computing, 2004, v:16, n:4, pp:360-370 [Journal ] Anya Tsalenko , Roded Sharan , Vessela Kristensen , Hege Edvardsen , Anne-Lise Børresen-Dale , Amir Ben-Dor , Zohar Yakhini Analysis of Snp-expression Association Matrices. [Citation Graph (0, 0)][DBLP ] J. Bioinformatics and Computational Biology, 2006, v:4, n:2, pp:259-274 [Journal ] Eleazar Eskin , Roded Sharan , Eran Halperin A Note on Phasing Long Genomic Regions Using Local Haplotype Predictions. [Citation Graph (0, 0)][DBLP ] J. Bioinformatics and Computational Biology, 2006, v:4, n:3, pp:639-648 [Journal ] Amir Ben-Dor , Tzvika Hartman , Richard M. Karp , Benno Schwikowski , Roded Sharan , Zohar Yakhini Towards Optimally Multiplexed Applications of Universal Arrays. [Citation Graph (0, 0)][DBLP ] Journal of Computational Biology, 2004, v:11, n:2/3, pp:476-492 [Journal ] Amir Ben-Dor , Itsik Pe'er , Ron Shamir , Roded Sharan On the Complexity of Positional Sequencing by Hybridization. [Citation Graph (0, 0)][DBLP ] Journal of Computational Biology, 2002, v:8, n:4, pp:361-371 [Journal ] Eran Segal , Roded Sharan A Discriminative Model for Identifying Spatial cis-Regulatory Modules. [Citation Graph (0, 0)][DBLP ] Journal of Computational Biology, 2005, v:12, n:6, pp:822-834 [Journal ] Roded Sharan , Jens Gramm , Zohar Yakhini , Amir Ben-Dor Multiplexing Schemes for Generic SNP Genotyping Assays. [Citation Graph (0, 0)][DBLP ] Journal of Computational Biology, 2005, v:12, n:5, pp:514-533 [Journal ] Roded Sharan , Trey Ideker , Brian P. Kelley , Ron Shamir , Richard M. Karp Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data. [Citation Graph (0, 0)][DBLP ] Journal of Computational Biology, 2005, v:12, n:6, pp:835-846 [Journal ] Tzvika Hartman , Roded Sharan A 1.5-approximation algorithm for sorting by transpositions and transreversals. [Citation Graph (0, 0)][DBLP ] J. Comput. Syst. Sci., 2005, v:70, n:3, pp:300-320 [Journal ] Brian P. Kelley , Bingbing Yuan , Fran Lewitter , Roded Sharan , Brent R. Stockwell , Trey Ideker PathBLAST: a tool for alignment of protein interaction networks. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:83-88 [Journal ] Roded Sharan , Asa Ben-Hur , Gabriela G. Loots , Ivan Ovcharenko CREME: Cis-Regulatory Module Explorer for the human genome. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:253-256 [Journal ] Pavol Hell , Ron Shamir , Roded Sharan A Fully Dynamic Algorithm for Recognizing and Representing Proper Interval Graphs. [Citation Graph (0, 0)][DBLP ] SIAM J. Comput., 2001, v:31, n:1, pp:289-305 [Journal ] Assaf Natanzon , Ron Shamir , Roded Sharan A Polynomial Approximation Algorithm for the Minimum Fill-In Problem. [Citation Graph (0, 0)][DBLP ] SIAM J. Comput., 2000, v:30, n:4, pp:1067-1079 [Journal ] Itsik Pe'er , Tal Pupko , Ron Shamir , Roded Sharan Incomplete Directed Perfect Phylogeny. [Citation Graph (0, 0)][DBLP ] SIAM J. Comput., 2004, v:33, n:3, pp:590-607 [Journal ] Roded Sharan , Bjarni V. Halldórsson , Sorin Istrail Islands of Tractability for Parsimony Haplotyping. [Citation Graph (0, 0)][DBLP ] IEEE/ACM Trans. Comput. Biology Bioinform., 2006, v:3, n:3, pp:303-311 [Journal ] Silpa Suthram , Tomer Shlomi , Eytan Ruppin , Roded Sharan , Trey Ideker Comparison of Protein-Protein Interaction Confidence Assignment Schemes. [Citation Graph (0, 0)][DBLP ] Systems Biology and Regulatory Genomics, 2005, pp:39-50 [Conf ] Improved network-based identification of protein orthologs. [Citation Graph (, )][DBLP ] A Propagation-based Algorithm for Inferring Gene-Disease Assocations. [Citation Graph (, )][DBLP ] SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments. [Citation Graph (, )][DBLP ] Fast and Accurate Alignment of Multiple Protein Networks. [Citation Graph (, )][DBLP ] An Algorithmic Framework for Predicting Side-Effects of Drugs. [Citation Graph (, )][DBLP ] Topology-Free Querying of Protein Interaction Networks. [Citation Graph (, )][DBLP ] An Algorithm for Orienting Graphs Based on Cause-Effect Pairs and Its Applications to Orienting Protein Networks. [Citation Graph (, )][DBLP ] Improved Orientations of Physical Networks. [Citation Graph (, )][DBLP ] Constraint-based functional similarity of metabolic genes: going beyond network topology. [Citation Graph (, )][DBLP ] Pepitope: epitope mapping from affinity-selected peptides. [Citation Graph (, )][DBLP ] NetworkBLAST: comparative analysis of protein networks. [Citation Graph (, )][DBLP ] A direct comparison of protein interaction confidence assignment schemes. [Citation Graph (, )][DBLP ] On the complexity of SNP block partitioning under the perfect phylogeny model. [Citation Graph (, )][DBLP ] Search in 0.003secs, Finished in 0.456secs