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## Search the dblp DataBase
Sridhar Hannenhalli:
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## Publications of Author- Kien A. Hua, Sridhar Hannenhalli
**Parallel Transitive Closure Computations Using Topological Sort.**[Citation Graph (3, 0)][DBLP] PDIS, 1991, pp:122-129 [Conf] - Piotr Berman, Sridhar Hannenhalli
**Fast Sorting by Reversal.**[Citation Graph (0, 0)][DBLP] CPM, 1996, pp:168-185 [Conf] - Sridhar Hannenhalli
**Polynomial-time Algorithm for Computing Translocation Distance between Genomes.**[Citation Graph (0, 0)][DBLP] CPM, 1995, pp:162-176 [Conf] - Piotr Berman, Sridhar Hannenhalli, Marek Karpinski
**1.375-Approximation Algorithm for Sorting by Reversals.**[Citation Graph (0, 0)][DBLP] ESA, 2002, pp:200-210 [Conf] - Sridhar Hannenhalli, Pavel A. Pevzner
**Transforming Men into Mice (Polynomial Algorithm for Genomic Distance Problem).**[Citation Graph (0, 0)][DBLP] FOCS, 1995, pp:581-592 [Conf] - N. Chandrasekharan, Sridhar Hannenhalli
**Efficient Algorithms for Computing Matching and Chromatic Polynominals on Series-Parallel Graphs.**[Citation Graph (0, 0)][DBLP] ICCI, 1992, pp:42-45 [Conf] - Sridhar Hannenhalli, Kalyan S. Perumalla, N. Chandrasekharan, R. Sridhar
**A Distributed Algorithm for Ear Decomposition.**[Citation Graph (0, 0)][DBLP] ICCI, 1993, pp:180-184 [Conf] - Sridhar Hannenhalli, Samuel Levy
**Promoter prediction in the human genome.**[Citation Graph (0, 0)][DBLP] ISMB (Supplement of Bioinformatics), 2001, pp:90-96 [Conf] - Sridhar Hannenhalli, Li-San Wang
**Enhanced position weight matrices using mixture models.**[Citation Graph (0, 0)][DBLP] ISMB (Supplement of Bioinformatics), 2005, pp:204-212 [Conf] - Logan Everett, Li-San Wang, Sridhar Hannenhalli
**Dense subgraph computation via stochastic search: application to detect transcriptional modules.**[Citation Graph (0, 0)][DBLP] ISMB (Supplement of Bioinformatics), 2006, pp:117-123 [Conf] - Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Martin Farach, Sridhar Hannenhalli, S. Muthukrishnan, Steven Skiena
**Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model.**[Citation Graph (0, 0)][DBLP] RECOMB, 1997, pp:1-2 [Conf] - Perry Evans, Greg Donahue, Sridhar Hannenhalli
**Conservation Patterns in**[Citation Graph (0, 0)][DBLP]*cis*-Elements Reveal Compensatory Mutations. Comparative Genomics, 2006, pp:186-199 [Conf] - Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Martin Farach, Sridhar Hannenhalli, Steven Skiena
**Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model.**[Citation Graph (0, 0)][DBLP] SODA, 1997, pp:390-399 [Conf] - Sridhar Hannenhalli, Pavel A. Pevzner
**To Cut... or Not to Cut (Applications of Comparative Physical Maps in Molecular Evolution).**[Citation Graph (0, 0)][DBLP] SODA, 1996, pp:304-313 [Conf] - Sridhar Hannenhalli, Pavel A. Pevzner
**Transforming cabbage into turnip: polynomial algorithm for sorting signed permutations by reversals.**[Citation Graph (0, 0)][DBLP] STOC, 1995, pp:178-189 [Conf] - Sridhar Hannenhalli, W. Feldman, H. F. Lewis, Steven Skiena, Pavel A. Pevzner
**Positional sequencing by hybridization.**[Citation Graph (0, 0)][DBLP] Computer Applications in the Biosciences, 1996, v:12, n:1, pp:19-24 [Journal] - Samuel Levy, Sridhar Hannenhalli, Christopher T. Workman
**Enrichment of regulatory signals in conserved non-coding genomic sequence.**[Citation Graph (0, 0)][DBLP] Bioinformatics, 2001, v:17, n:10, pp:871-877 [Journal] - Junwen Wang, Sridhar Hannenhalli
**Generalizations of Markov model to characterize biological sequences.**[Citation Graph (0, 0)][DBLP] BMC Bioinformatics, 2005, v:6, n:, pp:219- [Journal] - Sridhar Hannenhalli
**Polynomial-time Algorithm for Computing Translocation Distance Between Genomes.**[Citation Graph (0, 0)][DBLP] Discrete Applied Mathematics, 1996, v:71, n:1-3, pp:137-151 [Journal] - Piotr Berman, Sridhar Hannenhalli, Marek Karpinski
**1.375-Approximation Algorithm for Sorting by Reversals**[Citation Graph (0, 0)][DBLP] Electronic Colloquium on Computational Complexity (ECCC), 2001, v:8, n:47, pp:- [Journal] - Sridhar Hannenhalli, Pavel A. Pevzner
**Transforming Cabbage into Turnip: Polynomial Algorithm for Sorting Signed Permutations by Reversals.**[Citation Graph (0, 0)][DBLP] J. ACM, 1999, v:46, n:1, pp:1-27 [Journal] - Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Sridhar Hannenhalli, Martin Farach, S. Muthukrishnan, Steven Skiena
**Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model.**[Citation Graph (0, 0)][DBLP] Journal of Computational Biology, 1997, v:4, n:3, pp:275-296 [Journal] - Vineet Bafna, Dan Gusfield, Sridhar Hannenhalli, Shibu Yooseph
**A Note on Efficient Computation of Haplotypes via Perfect Phylogeny.**[Citation Graph (0, 0)][DBLP] Journal of Computational Biology, 2004, v:11, n:5, pp:858-866 [Journal] - Vineet Bafna, Sridhar Hannenhalli, Ken Rice, Lisa Vawter
**Ligand-Receptor Pairing Via Tree Comparison.**[Citation Graph (0, 0)][DBLP] Journal of Computational Biology, 2000, v:7, n:1-2, pp:59-70 [Journal] - Vlado Dancík, Sridhar Hannenhalli, S. Muthukrishnan
**Hardness of Flip-Cut Problems from Optical Mapping.**[Citation Graph (0, 0)][DBLP] Journal of Computational Biology, 1997, v:4, n:2, pp:119-126 [Journal] - Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli
**An Interaction-Dependent Model for Transcription Factor Binding.**[Citation Graph (0, 0)][DBLP] Systems Biology and Regulatory Genomics, 2005, pp:225-234 [Conf] **Mimosa: Mixture Model of Co-expression to Detect Modulators of Regulatory Interaction.**[Citation Graph (, )][DBLP]**Eukaryotic transcription factor binding sites - modeling and integrative search methods.**[Citation Graph (, )][DBLP]
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