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Stefan Kurtz:
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Publications of Author
- Stefan Kurtz, Gene Myers
Estimating the Probability of Approximate Matches. [Citation Graph (0, 0)][DBLP] CPM, 1997, pp:52-64 [Conf]
- Matthias Höchsmann, Thomas Töller, Robert Giegerich, Stefan Kurtz
Local Similarity in RNA Secondary Structures. [Citation Graph (0, 0)][DBLP] CSB, 2003, pp:159-168 [Conf]
- Bernhard Balkenhol, Stefan Kurtz, Yuri M. Shtarkov
Modifications of the Burrows and Wheeler Data Compression Algorithm. [Citation Graph (0, 0)][DBLP] Data Compression Conference, 1999, pp:188-197 [Conf]
- Robert Giegerich, Stefan Kurtz
Suffix Trees in the Functional Programming Paradigm. [Citation Graph (0, 0)][DBLP] ESOP, 1994, pp:225-240 [Conf]
- Michael Beckstette, Dirk Strothmann, R. Homann, Robert Giegerich, Stefan Kurtz
PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays. [Citation Graph (0, 0)][DBLP] German Conference on Bioinformatics, 2004, pp:53-64 [Conf]
- Michael Höhl, Stefan Kurtz, Enno Ohlebusch
Efficient multiple genome alignment. [Citation Graph (0, 0)][DBLP] ISMB, 2002, pp:312-320 [Conf]
- Stefan Kurtz, Enno Ohlebusch, Chris Schleiermacher, Jens Stoye, Robert Giegerich
Computation and Visualization of Degenerate Repeats in Complete Genomes. [Citation Graph (0, 0)][DBLP] ISMB, 2000, pp:228-238 [Conf]
- Mohamed Ibrahim Abouelhoda, Enno Ohlebusch, Stefan Kurtz
Optimal Exact Strring Matching Based on Suffix Arrays. [Citation Graph (0, 0)][DBLP] SPIRE, 2002, pp:31-43 [Conf]
- Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohlebusch
The Enhanced Suffix Array and Its Applications to Genome Analysis. [Citation Graph (0, 0)][DBLP] WABI, 2002, pp:449-463 [Conf]
- Robert Giegerich, Stefan Kurtz, Jens Stoye
Efficient Implementation of Lazy Suffix Trees. [Citation Graph (0, 0)][DBLP] Algorithm Engineering, 1999, pp:30-42 [Conf]
- Robert Giegerich, Stefan Kurtz
From Ukkonen to McCreight and Weiner: A Unifying View of Linear-Time Suffix Tree Construction. [Citation Graph (0, 0)][DBLP] Algorithmica, 1997, v:19, n:3, pp:331-353 [Journal]
- Patrick Chain, Stefan Kurtz, Enno Ohlebusch, Tom Slezak
An Applications-focused Review of Comparative Genomics Tools: Capabilities, Limitations and Future Challenges. [Citation Graph (0, 0)][DBLP] Briefings in Bioinformatics, 2003, v:4, n:2, pp:105-123 [Journal]
- Jomuna V. Choudhuri, Chris Schleiermacher, Stefan Kurtz, Robert Giegerich
GenAlyzer: interactive visualization of sequence similarities between entire genomes. [Citation Graph (0, 0)][DBLP] Bioinformatics, 2004, v:20, n:12, pp:1964-1965 [Journal]
- Stefan Kurtz, Chris Schleiermacher
REPuter: fast computation of maximal repeats in complete genomes. [Citation Graph (0, 0)][DBLP] Bioinformatics, 1999, v:15, n:5, pp:426-427 [Journal]
- Gordon Gremme, Volker Brendel, Michael E. Sparks, Stefan Kurtz
Engineering a software tool for gene structure prediction in higher organisms. [Citation Graph (0, 0)][DBLP] Information & Software Technology, 2005, v:47, n:15, pp:965-978 [Journal]
- Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohlebusch
Replacing suffix trees with enhanced suffix arrays. [Citation Graph (0, 0)][DBLP] J. Discrete Algorithms, 2004, v:2, n:1, pp:53-86 [Journal]
- Stefan Gräf, Dirk Strothmann, Stefan Kurtz, Gerhard Steger
HyPaLib: a database of RNAs and RNA structural elements defined by hybrid patterns. [Citation Graph (0, 0)][DBLP] Nucleic Acids Research, 2001, v:29, n:1, pp:196-198 [Journal]
- Jan Krüger, Alexander Sczyrba, Stefan Kurtz, Robert Giegerich
e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences. [Citation Graph (0, 0)][DBLP] Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:301-304 [Journal]
- Alexander Sczyrba, Jan Krüger, Henning Mersch, Stefan Kurtz, Robert Giegerich
RNA-related tools on the Bielefeld Bioinformatics Server. [Citation Graph (0, 0)][DBLP] Nucleic Acids Research, 2003, v:31, n:13, pp:3767-3770 [Journal]
- Robert Giegerich, Stefan Kurtz
A Comparison of Imperative and Purely Functional Suffix Tree Constructions. [Citation Graph (0, 0)][DBLP] Sci. Comput. Program., 1995, v:25, n:2-3, pp:187-218 [Journal]
- Robert Giegerich, Stefan Kurtz, Jens Stoye
Efficient implementation of lazy suffix trees. [Citation Graph (0, 0)][DBLP] Softw., Pract. Exper., 2003, v:33, n:11, pp:1035-1049 [Journal]
- Stefan Kurtz
Reducing the space requirement of suffix trees. [Citation Graph (0, 0)][DBLP] Softw., Pract. Exper., 1999, v:29, n:13, pp:1149-1171 [Journal]
- Bernhard Balkenhol, Stefan Kurtz
Universal Data Compression Based on the Burrows-Wheeler Transformation: Theory and Practice. [Citation Graph (0, 0)][DBLP] IEEE Trans. Computers, 2000, v:49, n:10, pp:1043-1053 [Journal]
Optimized design and assessment of whole genome tiling arrays. [Citation Graph (, )][DBLP]
AnnotationSketch: a genome annotation drawing library. [Citation Graph (, )][DBLP]
Significant speedup of database searches with HMMs by search space reduction with PSSM family models. [Citation Graph (, )][DBLP]
Efficient computation of absent words in genomic sequences. [Citation Graph (, )][DBLP]
LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons. [Citation Graph (, )][DBLP]
CoCoNUT: an efficient system for the comparison and analysis of genomes. [Citation Graph (, )][DBLP]
Optimising oligonucleotide array design for ChIP-on-chip. [Citation Graph (, )][DBLP]
Fast index based algorithms and software for matching position specific scoring matrices. [Citation Graph (, )][DBLP]
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