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Stefan Kurtz: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Stefan Kurtz, Gene Myers
    Estimating the Probability of Approximate Matches. [Citation Graph (0, 0)][DBLP]
    CPM, 1997, pp:52-64 [Conf]
  2. Matthias Höchsmann, Thomas Töller, Robert Giegerich, Stefan Kurtz
    Local Similarity in RNA Secondary Structures. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:159-168 [Conf]
  3. Bernhard Balkenhol, Stefan Kurtz, Yuri M. Shtarkov
    Modifications of the Burrows and Wheeler Data Compression Algorithm. [Citation Graph (0, 0)][DBLP]
    Data Compression Conference, 1999, pp:188-197 [Conf]
  4. Robert Giegerich, Stefan Kurtz
    Suffix Trees in the Functional Programming Paradigm. [Citation Graph (0, 0)][DBLP]
    ESOP, 1994, pp:225-240 [Conf]
  5. Michael Beckstette, Dirk Strothmann, R. Homann, Robert Giegerich, Stefan Kurtz
    PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays. [Citation Graph (0, 0)][DBLP]
    German Conference on Bioinformatics, 2004, pp:53-64 [Conf]
  6. Michael Höhl, Stefan Kurtz, Enno Ohlebusch
    Efficient multiple genome alignment. [Citation Graph (0, 0)][DBLP]
    ISMB, 2002, pp:312-320 [Conf]
  7. Stefan Kurtz, Enno Ohlebusch, Chris Schleiermacher, Jens Stoye, Robert Giegerich
    Computation and Visualization of Degenerate Repeats in Complete Genomes. [Citation Graph (0, 0)][DBLP]
    ISMB, 2000, pp:228-238 [Conf]
  8. Mohamed Ibrahim Abouelhoda, Enno Ohlebusch, Stefan Kurtz
    Optimal Exact Strring Matching Based on Suffix Arrays. [Citation Graph (0, 0)][DBLP]
    SPIRE, 2002, pp:31-43 [Conf]
  9. Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohlebusch
    The Enhanced Suffix Array and Its Applications to Genome Analysis. [Citation Graph (0, 0)][DBLP]
    WABI, 2002, pp:449-463 [Conf]
  10. Robert Giegerich, Stefan Kurtz, Jens Stoye
    Efficient Implementation of Lazy Suffix Trees. [Citation Graph (0, 0)][DBLP]
    Algorithm Engineering, 1999, pp:30-42 [Conf]
  11. Robert Giegerich, Stefan Kurtz
    From Ukkonen to McCreight and Weiner: A Unifying View of Linear-Time Suffix Tree Construction. [Citation Graph (0, 0)][DBLP]
    Algorithmica, 1997, v:19, n:3, pp:331-353 [Journal]
  12. Patrick Chain, Stefan Kurtz, Enno Ohlebusch, Tom Slezak
    An Applications-focused Review of Comparative Genomics Tools: Capabilities, Limitations and Future Challenges. [Citation Graph (0, 0)][DBLP]
    Briefings in Bioinformatics, 2003, v:4, n:2, pp:105-123 [Journal]
  13. Jomuna V. Choudhuri, Chris Schleiermacher, Stefan Kurtz, Robert Giegerich
    GenAlyzer: interactive visualization of sequence similarities between entire genomes. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:12, pp:1964-1965 [Journal]
  14. Stefan Kurtz, Chris Schleiermacher
    REPuter: fast computation of maximal repeats in complete genomes. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1999, v:15, n:5, pp:426-427 [Journal]
  15. Gordon Gremme, Volker Brendel, Michael E. Sparks, Stefan Kurtz
    Engineering a software tool for gene structure prediction in higher organisms. [Citation Graph (0, 0)][DBLP]
    Information & Software Technology, 2005, v:47, n:15, pp:965-978 [Journal]
  16. Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohlebusch
    Replacing suffix trees with enhanced suffix arrays. [Citation Graph (0, 0)][DBLP]
    J. Discrete Algorithms, 2004, v:2, n:1, pp:53-86 [Journal]
  17. Stefan Gräf, Dirk Strothmann, Stefan Kurtz, Gerhard Steger
    HyPaLib: a database of RNAs and RNA structural elements defined by hybrid patterns. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2001, v:29, n:1, pp:196-198 [Journal]
  18. Jan Krüger, Alexander Sczyrba, Stefan Kurtz, Robert Giegerich
    e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:301-304 [Journal]
  19. Alexander Sczyrba, Jan Krüger, Henning Mersch, Stefan Kurtz, Robert Giegerich
    RNA-related tools on the Bielefeld Bioinformatics Server. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3767-3770 [Journal]
  20. Robert Giegerich, Stefan Kurtz
    A Comparison of Imperative and Purely Functional Suffix Tree Constructions. [Citation Graph (0, 0)][DBLP]
    Sci. Comput. Program., 1995, v:25, n:2-3, pp:187-218 [Journal]
  21. Robert Giegerich, Stefan Kurtz, Jens Stoye
    Efficient implementation of lazy suffix trees. [Citation Graph (0, 0)][DBLP]
    Softw., Pract. Exper., 2003, v:33, n:11, pp:1035-1049 [Journal]
  22. Stefan Kurtz
    Reducing the space requirement of suffix trees. [Citation Graph (0, 0)][DBLP]
    Softw., Pract. Exper., 1999, v:29, n:13, pp:1149-1171 [Journal]
  23. Bernhard Balkenhol, Stefan Kurtz
    Universal Data Compression Based on the Burrows-Wheeler Transformation: Theory and Practice. [Citation Graph (0, 0)][DBLP]
    IEEE Trans. Computers, 2000, v:49, n:10, pp:1043-1053 [Journal]

  24. Optimized design and assessment of whole genome tiling arrays. [Citation Graph (, )][DBLP]


  25. AnnotationSketch: a genome annotation drawing library. [Citation Graph (, )][DBLP]


  26. Significant speedup of database searches with HMMs by search space reduction with PSSM family models. [Citation Graph (, )][DBLP]


  27. Efficient computation of absent words in genomic sequences. [Citation Graph (, )][DBLP]


  28. LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons. [Citation Graph (, )][DBLP]


  29. CoCoNUT: an efficient system for the comparison and analysis of genomes. [Citation Graph (, )][DBLP]


  30. Optimising oligonucleotide array design for ChIP-on-chip. [Citation Graph (, )][DBLP]


  31. Fast index based algorithms and software for matching position specific scoring matrices. [Citation Graph (, )][DBLP]


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