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Sven Rahmann: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Sven Rahmann
    Subsequence Combinatorics and Applications to Microarray Production, DNA Sequencing and Chaining Algorithms. [Citation Graph (0, 0)][DBLP]
    CPM, 2006, pp:153-164 [Conf]
  2. Sven Rahmann, Eric Rivals
    Exact and Efficient Computation of the Expected Number of Missing and Common Words in Random Texts. [Citation Graph (0, 0)][DBLP]
    CPM, 2000, pp:375-387 [Conf]
  3. Alexander Schliep, David C. Torney, Sven Rahmann
    Group Testing With DNA Chips: Generating Designs and Decoding Experiments. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:84-93 [Conf]
  4. Sven Rahmann
    Fast and Sensitive Probe Selection for DNA Chips Using Jumps in Matching Statistics. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:57-64 [Conf]
  5. Sven Rahmann
    Rapid Large-Scale Oligonucleotide Selection for Microarrays. [Citation Graph (0, 0)][DBLP]
    CSB, 2002, pp:54-63 [Conf]
  6. Sven Rahmann
    The shortest common supersequence problem in a microarray production setting. [Citation Graph (0, 0)][DBLP]
    ECCB, 2003, pp:156-161 [Conf]
  7. Tobias Müller, Sven Rahmann, Thomas Dandekar, Matthias Wolf
    Robust estimation of the phylogeny of Chlorophyceae(Chlorophyta)based on profile distances. [Citation Graph (0, 0)][DBLP]
    German Conference on Bioinformatics, 2003, pp:97-101 [Conf]
  8. Eric Rivals, Sven Rahmann
    Combinatorics of Periods in Strings. [Citation Graph (0, 0)][DBLP]
    ICALP, 2001, pp:615-626 [Conf]
  9. Christoph Dieterich, Sven Rahmann, Martin Vingron
    Functional inference from non-random distributions of conserved predicted transcription factor binding sites. [Citation Graph (0, 0)][DBLP]
    ISMB/ECCB (Supplement of Bioinformatics), 2004, pp:109-115 [Conf]
  10. Gunnar W. Klau, Sven Rahmann, Alexander Schliep, Martin Vingron, Knut Reinert
    Optimal robust non-unique probe selection using Integer Linear Programming. [Citation Graph (0, 0)][DBLP]
    ISMB/ECCB (Supplement of Bioinformatics), 2004, pp:186-193 [Conf]
  11. Tobias Müller, Sven Rahmann, Marc Rehmsmeier
    Non-symmetric score matrices and the detection of homologous transmembrane proteins. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2001, pp:182-189 [Conf]
  12. Alexander Schliep, Sven Rahmann
    Decoding non-unique oligonucleotide hybridization experiments of targets related by a phylogenetic tree. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2006, pp:424-430 [Conf]
  13. Mathew J. Palakal, Sven Rahmann, Birong Liao
    Editorial message: special track on bioinformatics. [Citation Graph (0, 0)][DBLP]
    SAC, 2005, pp:99- [Conf]
  14. Sérgio A. de Carvalho, Sven Rahmann
    Improving the Layout of Oligonucleotide Microarrays: Pivot Partitioning. [Citation Graph (0, 0)][DBLP]
    WABI, 2006, pp:321-332 [Conf]
  15. Sven Rahmann
    Rapid Large-Scale Oligonucleotide Selection for Microarrays. [Citation Graph (0, 0)][DBLP]
    WABI, 2002, pp:434- [Conf]
  16. Sven Rahmann
    Dynamic Programming Algorithms for Two Statistical Problems in Computational Biology. [Citation Graph (0, 0)][DBLP]
    WABI, 2003, pp:151-164 [Conf]
  17. Sven Rahmann, Gunnar W. Klau
    Integer Linear Programs for Discovering Approximate Gene Clusters. [Citation Graph (0, 0)][DBLP]
    WABI, 2006, pp:298-309 [Conf]
  18. Sven Rahmann, Christine Gräfe
    Mean and variance of the Gibbs free energy of oligonucleotides in the nearest neighbor model under varying conditions. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:17, pp:2928-2933 [Journal]
  19. Benjamin Schuster-Böckler, Jörg Schultz, Sven Rahmann
    HMM Logos for visualization of protein families. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:7- [Journal]
  20. Sven Rahmann, Eric Rivals
    On The Distribution Of The Number Of Missing Words In Random Texts. [Citation Graph (0, 0)][DBLP]
    Combinatorics, Probability & Computing, 2003, v:12, n:1, pp:- [Journal]
  21. Gunnar W. Klau, Sven Rahmann, Alexander Schliep, Martin Vingron, Knut Reinert
    Integer linear programming approaches for non-unique probe selection. [Citation Graph (0, 0)][DBLP]
    Discrete Applied Mathematics, 2007, v:155, n:6-7, pp:840-856 [Journal]
  22. Sven Rahmann
    Fast Large Scale Oligonucleotide Selection Using the Longest Common Factor Approach. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2003, v:1, n:2, pp:343-362 [Journal]
  23. Eric Rivals, Sven Rahmann
    Combinatorics of periods in strings. [Citation Graph (0, 0)][DBLP]
    J. Comb. Theory, Ser. A, 2003, v:104, n:1, pp:95-113 [Journal]
  24. Stefan Roepcke, Steffen Grossmann, Sven Rahmann, Martin Vingron
    T-Reg Comparator: an analysis tool for the comparison of position weight matrices. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Web-Server-Issue, pp:438-441 [Journal]
  25. Hans-Michael Kaltenbach, Sebastian Böcker, Sven Rahmann
    Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting. [Citation Graph (0, 0)][DBLP]
    Systems Biology and Computational Proteomics, 2006, pp:29-41 [Conf]

  26. Structural Identifiability in Low-Rank Matrix Factorization. [Citation Graph (, )][DBLP]


  27. Probabilistic Arithmetic Automata and Their Application to Pattern Matching Statistics. [Citation Graph (, )][DBLP]


  28. Microarray Layout as Quadratic Assignment Problem. [Citation Graph (, )][DBLP]


  29. Modeling evolutionary fitness for DNA motif discovery. [Citation Graph (, )][DBLP]


  30. Computing Alignment Seed Sensitivity with Probabilistic Arithmetic Automata. [Citation Graph (, )][DBLP]


  31. Speeding Up Exact Motif Discovery by Bounding the Expected Clump Size. [Citation Graph (, )][DBLP]


  32. Exact Analysis of Horspool's and Sunday's Pattern Matching Algorithms with Probabilistic Arithmetic Automata. [Citation Graph (, )][DBLP]


  33. Discovering Biomarkers for Myocardial Infarction from SELDI-TOF Spectra. [Citation Graph (, )][DBLP]


  34. Structural Identifiability in Low-Rank Matrix Factorization. [Citation Graph (, )][DBLP]


  35. Towards the integrated analysis, visualization and reconstruction of microbial gene regulatory networks. [Citation Graph (, )][DBLP]


  36. Natural similarity measures between position frequency matrices with an application to clustering. [Citation Graph (, )][DBLP]


  37. Efficient exact motif discovery. [Citation Graph (, )][DBLP]


  38. Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing. [Citation Graph (, )][DBLP]


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