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Publications of Author

1. Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fangfang Pan, Liming Cai
   Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes. [Citation Graph (0, 0)][DBLP]
   CSB, 2005, pp:223-234 [Conf]
   
2. Dongsheng Che, Yinglei Song, Khaled Rasheed
   MDGA: motif discovery using a genetic algorithm. [Citation Graph (0, 0)][DBLP]
   GECCO, 2005, pp:447-452 [Conf]
   
3. Chunmei Liu, Yinglei Song, Russell L. Malmberg, Liming Cai
   Profiling and Searching for RNA Pseudoknot Structures in Genomes. [Citation Graph (0, 0)][DBLP]
   International Conference on Computational Science (2), 2005, pp:968-975 [Conf]
   
4. Chunmei Liu, Yinglei Song
   Exact Algorithms for Finding the Minimum Independent Dominating Set in Graphs. [Citation Graph (0, 0)][DBLP]
   ISAAC, 2006, pp:439-448 [Conf]
   
5. Chunmei Liu, Bo Yan, Yinglei Song, Ying Xu, Liming Cai
   Peptide sequence tag-based blind identification of post-translational modifications with point process model. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2006, pp:307-313 [Conf]
   
6. Chunmei Liu, Yinglei Song, Bo Yan, Ying Xu, Liming Cai
   Fast De novo Peptide Sequencing and Spectral Alignment via Tree Decomposition. [Citation Graph (0, 0)][DBLP]
   Pacific Symposium on Biocomputing, 2006, pp:255-266 [Conf]
   
7. Yinglei Song, Chunmei Liu, Xiuzhen Huang, Russell L. Malmberg, Ying Xu, Liming Cai
   Efficient Parameterized Algorithm for Biopolymer Structure-Sequence Alignment. [Citation Graph (0, 0)][DBLP]
   WABI, 2005, pp:376-388 [Conf]
   
8. Yinglei Song, Chunmei Liu, Russell L. Malmberg, Liming Cai
   Phylogenetic Network Inferences Through Efficient Haplotyping. [Citation Graph (0, 0)][DBLP]
   WABI, 2006, pp:68-79 [Conf]
   
9. Yinglei Song, Ji-Zhen Zhao, Chunmei Liu, Kan Liu, Russell L. Malmberg, Liming Cai
   RNA Structural Homology Search with a Succinct Stochastic Grammar Model. [Citation Graph (0, 0)][DBLP]
   J. Comput. Sci. Technol., 2005, v:20, n:4, pp:454-464 [Journal]
   
10. Yinglei Song, Chunmei Liu, Xiuzhen Huang, Russell L. Malmberg, Ying Xu, Liming Cai
    Efficient Parameterized Algorithms for Biopolymer Structure-Sequence Alignment. [Citation Graph (0, 0)][DBLP]
    IEEE/ACM Trans. Comput. Biology Bioinform., 2006, v:3, n:4, pp:423-432 [Journal]
    
11. Chunmei Liu, Yinglei Song, Russell L. Malmberg, Liming Cai
    Profiling and Searching for RNA Pseudoknot Structures in Genomes. [Citation Graph (0, 0)][DBLP]
    T. Comp. Sys. Biology, 2005, v:2, n:, pp:37-47 [Journal]
    
12. Chunmei Liu, Yinglei Song, Louis W. Shapiro
    RNA Folding Including Pseudoknots: A New Parameterized Algorithm and Improved Upper Bound. [Citation Graph (0, 0)][DBLP]
    WABI, 2007, pp:310-322 [Conf]
    
13. 
    Haplotype inference using a genetic algorithm. [Citation Graph (, )][DBLP]
    
    
14. 
    Clustering for DNA Microarray Data Analysis with a Graph Cut Based Algorithm. [Citation Graph (, )][DBLP]
    
    
15. 
    Alignment of Multiple Proteins with an Ensemble of Hidden Markov Models. [Citation Graph (, )][DBLP]
    
    
16. 
    Time Series Similarity Matching with a New Distance Measure. [Citation Graph (, )][DBLP]
    
    
17. 
    Knowledge Retrieval in Financial Domain. [Citation Graph (, )][DBLP]
    
    
18. 
    PaperGuard: A Support Vector Machine Approach for Screening Machine Generated Papers. [Citation Graph (, )][DBLP]
    
    
19. 
    Parameterized Complexity and Biopolymer Sequence Comparison. [Citation Graph (, )][DBLP]