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Publications of Author

1. Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fangfang Pan, Liming Cai
   Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes. [Citation Graph (0, 0)][DBLP]
   CSB, 2005, pp:223-234 [Conf]
   
2. Chunmei Liu, Yinglei Song, Russell L. Malmberg, Liming Cai
   Profiling and Searching for RNA Pseudoknot Structures in Genomes. [Citation Graph (0, 0)][DBLP]
   International Conference on Computational Science (2), 2005, pp:968-975 [Conf]
   
3. Liming Cai, Russell L. Malmberg, Yunzhou Wu
   Stochastic modeling of RNA pseudoknotted structures: a grammatical approach. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2003, pp:66-73 [Conf]
   
4. Yinglei Song, Chunmei Liu, Xiuzhen Huang, Russell L. Malmberg, Ying Xu, Liming Cai
   Efficient Parameterized Algorithm for Biopolymer Structure-Sequence Alignment. [Citation Graph (0, 0)][DBLP]
   WABI, 2005, pp:376-388 [Conf]
   
5. Yinglei Song, Chunmei Liu, Russell L. Malmberg, Liming Cai
   Phylogenetic Network Inferences Through Efficient Haplotyping. [Citation Graph (0, 0)][DBLP]
   WABI, 2006, pp:68-79 [Conf]
   
6. Jizhen Zhao, Russell L. Malmberg, Liming Cai
   Rapid ab initio RNA Folding Including Pseudoknots Via Graph Tree Decomposition. [Citation Graph (0, 0)][DBLP]
   WABI, 2006, pp:262-273 [Conf]
   
7. Carolyn J. Lawrence, Christian M. Zmasek, R. Kelly Dawe, Russell L. Malmberg
   LumberJack: a heuristic tool for sequence alignment exploration and phylogenetic inference. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2004, v:20, n:12, pp:1977-1979 [Journal]
   
8. Yinglei Song, Ji-Zhen Zhao, Chunmei Liu, Kan Liu, Russell L. Malmberg, Liming Cai
   RNA Structural Homology Search with a Succinct Stochastic Grammar Model. [Citation Graph (0, 0)][DBLP]
   J. Comput. Sci. Technol., 2005, v:20, n:4, pp:454-464 [Journal]
   
9. Yinglei Song, Chunmei Liu, Xiuzhen Huang, Russell L. Malmberg, Ying Xu, Liming Cai
   Efficient Parameterized Algorithms for Biopolymer Structure-Sequence Alignment. [Citation Graph (0, 0)][DBLP]
   IEEE/ACM Trans. Comput. Biology Bioinform., 2006, v:3, n:4, pp:423-432 [Journal]
   
10. Chunmei Liu, Yinglei Song, Russell L. Malmberg, Liming Cai
    Profiling and Searching for RNA Pseudoknot Structures in Genomes. [Citation Graph (0, 0)][DBLP]
    T. Comp. Sys. Biology, 2005, v:2, n:, pp:37-47 [Journal]
    
11. 
    Fast and accurate search for non-coding RNA pseudoknot structures in genomes. [Citation Graph (, )][DBLP]
    
    
12. 
    RNATOPS-W: a web server for RNA structure searches of genomes. [Citation Graph (, )][DBLP]