The SCEAS System
Navigation Menu

Search the dblp DataBase

Title:
Author:

Alexandros Stamatakis: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Alexandros Stamatakis, Thomas Ludwig 0002, Harald Meier, Marty J. Wolf
    AxML: A Fast Program for Sequential and Parallel Phylogenetic Tree Calculations Based on the Maximum Likelihood Method. [Citation Graph (0, 0)][DBLP]
    CSB, 2002, pp:21-0 [Conf]
  2. Alexandros Stamatakis, Thomas Ludwig 0002, Harald Meier
    Parallel Inference of a 10.000-Taxon Phylogeny with Maximum Likelihood. [Citation Graph (0, 0)][DBLP]
    Euro-Par, 2004, pp:997-1004 [Conf]
  3. Z. Du, Alexandros Stamatakis, F. Lin, Usman Roshan, Luay Nakhleh
    Parallel Divide-and-Conquer Phylogeny Reconstruction by Maximum Likelihood. [Citation Graph (0, 0)][DBLP]
    HPCC, 2005, pp:776-785 [Conf]
  4. Alexandros Stamatakis
    An Efficient Program for Phylogenetic Inference Using Simulated Annealing. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2005, pp:- [Conf]
  5. Alexandros Stamatakis, Thomas Ludwig 0002
    Phylogenetic Tree Inference on PC Architectures with AxML/PAxML. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2003, pp:157- [Conf]
  6. Alexandros Stamatakis, Harald Meier, Thomas Ludwig 0002
    New Fast and Accurate Heuristics for Inference of Large Phylogenetic Trees. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2004, pp:- [Conf]
  7. Alexandros Stamatakis
    Phylogenetic models of rate heterogeneity: a high performance computing perspective. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2006, pp:- [Conf]
  8. Adam Arvelakis, Martin Reczko, Alexandros Stamatakis, Alkiviadis Symeonidis, Ioannis G. Tollis
    Using Treemaps to Visualize Phylogenetic Trees. [Citation Graph (0, 0)][DBLP]
    ISBMDA, 2005, pp:283-293 [Conf]
  9. Thomas Ludwig 0002, Markus Lindermeier, Alexandros Stamatakis, Günther Rackl
    Tool Environments in CORBA-Based Medical High Performance Computing. [Citation Graph (0, 0)][DBLP]
    PaCT, 2001, pp:447-455 [Conf]
  10. Alexandros Stamatakis, Markus Lindermeier, Michael Ott, Thomas Ludwig 0002, Harald Meier
    DAxML: A Program for Distributed Computation of Phylogenetic Trees Based on Load Managed CORBA. [Citation Graph (0, 0)][DBLP]
    PaCT, 2003, pp:538-548 [Conf]
  11. Alexandros Stamatakis, Michael Ott, Thomas Ludwig 0002
    RAxML-OMP: An Efficient Program for Phylogenetic Inference on SMPs. [Citation Graph (0, 0)][DBLP]
    PaCT, 2005, pp:288-302 [Conf]
  12. Maria Charalambous, Pedro Trancoso, Alexandros Stamatakis
    Initial Experiences Porting a Bioinformatics Application to a Graphics Processor. [Citation Graph (0, 0)][DBLP]
    Panhellenic Conference on Informatics, 2005, pp:415-425 [Conf]
  13. Filip Blagojevic, Dimitrios S. Nikolopoulos, Alexandros Stamatakis, Christos D. Antonopoulos
    Dynamic multigrain parallelization on the cell broadband engine. [Citation Graph (0, 0)][DBLP]
    PPOPP, 2007, pp:90-100 [Conf]
  14. Alexandros Stamatakis, Thomas Ludwig 0002, Harald Meier
    A fast program for maximum likelihood-based inference of large phylogenetic trees. [Citation Graph (0, 0)][DBLP]
    SAC, 2004, pp:197-201 [Conf]
  15. Alexandros Stamatakis, Thomas Ludwig 0002, Harald Meier, Marty J. Wolf
    Accelerating parallel maximum likelihood-based phylogenetic tree calculations using subtree equality vectors. [Citation Graph (0, 0)][DBLP]
    SC, 2002, pp:1-16 [Conf]
  16. David A. Bader, Usman Roshan, Alexandros Stamatakis
    Computational Grand Challenges in Assembling the Tree of Life: Problems and Solutions. [Citation Graph (0, 0)][DBLP]
    Advances in Computers, 2006, v:68, n:, pp:128-179 [Journal]
  17. Alexandros Stamatakis, Thomas Ludwig 0002, Harald Meier
    RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:4, pp:456-463 [Journal]
  18. Alexandros Stamatakis
    RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:21, pp:2688-2690 [Journal]
  19. Alexandros Stamatakis, Thomas Ludwig 0002, Harald Meier
    The AxML program family for maximum likelihood-based phylogenetic tree inference. [Citation Graph (0, 0)][DBLP]
    Concurrency - Practice and Experience, 2004, v:16, n:9, pp:975-988 [Journal]
  20. Alexandros Stamatakis, Thomas Ludwig 0002, Harald Meier
    RAxML-II: a program for sequential, parallel and distributed inference of large phylogenetic trees. [Citation Graph (0, 0)][DBLP]
    Concurrency and Computation: Practice and Experience, 2005, v:17, n:14, pp:1705-1723 [Journal]
  21. Thomas Ludwig 0002, Markus Lindermeier, Alexandros Stamatakis, Günther Rackl
    Tool environments in CORBA-based medical high-performance computing. [Citation Graph (0, 0)][DBLP]
    Future Generation Comp. Syst., 2002, v:18, n:6, pp:841-847 [Journal]
  22. Alexandros Stamatakis, Markus Lindermeier, Michael Ott, Thomas Ludwig 0002, Harald Meier
    DRAxML at home: a distributed program for computation of large phylogenetic trees. [Citation Graph (0, 0)][DBLP]
    Future Generation Comp. Syst., 2005, v:21, n:4, pp:725-730 [Journal]
  23. Günther Rackl, Thomas Ludwig 0002, Markus Lindermeier, Alexandros Stamatakis
    Efficiently building on-line tools for distributed heterogeneous environments. [Citation Graph (0, 0)][DBLP]
    Scientific Programming, 2002, v:10, n:1, pp:67-74 [Journal]
  24. Filip Blagojevic, Alexandros Stamatakis, Christos D. Antonopoulos, Dimitrios S. Nikolopoulos
    RAxML-Cell: Parallel Phylogenetic Tree Inference on the Cell Broadband Engine. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2007, pp:1-10 [Conf]
  25. Alexandros Stamatakis, Filip Blagojevic, Dimitrios S. Nikolopoulos, Christos D. Antonopoulos
    Exploring New Search Algorithms and Hardware for Phylogenetics: RAxML Meets the IBM Cell. [Citation Graph (0, 0)][DBLP]
    VLSI Signal Processing, 2007, v:48, n:3, pp:271-286 [Journal]

  26. Efficient PC-FPGA Communication over Gigabit Ethernet. [Citation Graph (, )][DBLP]


  27. A reconfigurable architecture for the Phylogenetic Likelihood Function. [Citation Graph (, )][DBLP]


  28. Fine-grain Parallelism Using Multi-core, Cell/BE, and GPU Systems: Accelerating the Phylogenetic Likelihood Function. [Citation Graph (, )][DBLP]


  29. Load Balance in the Phylogenetic Likelihood Kernel. [Citation Graph (, )][DBLP]


  30. Exploring FPGAs for accelerating the phylogenetic likelihood function. [Citation Graph (, )][DBLP]


  31. Accuracy and Performance of Single versus Double Precision Arithmetics for Maximum Likelihood Phylogeny Reconstruction. [Citation Graph (, )][DBLP]


  32. How Many Bootstrap Replicates Are Necessary?. [Citation Graph (, )][DBLP]


  33. Large-scale maximum likelihood-based phylogenetic analysis on the IBM BlueGene/L. [Citation Graph (, )][DBLP]


  34. Exploiting Fine-Grained Parallelism in the Phylogenetic Likelihood Function with MPI, Pthreads, and OpenMP: A Performance Study. [Citation Graph (, )][DBLP]


  35. Time and memory efficient likelihood-based tree searches on phylogenomic alignments with missing data. [Citation Graph (, )][DBLP]


  36. AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa. [Citation Graph (, )][DBLP]


Search in 0.533secs, Finished in 0.536secs
NOTICE1
System may not be available sometimes or not working properly, since it is still in development with continuous upgrades
NOTICE2
The rankings that are presented on this page should NOT be considered as formal since the citation info is incomplete in DBLP
 
System created by asidirop@csd.auth.gr [http://users.auth.gr/~asidirop/] © 2002
for Data Engineering Laboratory, Department of Informatics, Aristotle University © 2002