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Alexandros Stamatakis :
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Alexandros Stamatakis , Thomas Ludwig 0002 , Harald Meier , Marty J. Wolf AxML: A Fast Program for Sequential and Parallel Phylogenetic Tree Calculations Based on the Maximum Likelihood Method. [Citation Graph (0, 0)][DBLP ] CSB, 2002, pp:21-0 [Conf ] Alexandros Stamatakis , Thomas Ludwig 0002 , Harald Meier Parallel Inference of a 10.000-Taxon Phylogeny with Maximum Likelihood. [Citation Graph (0, 0)][DBLP ] Euro-Par, 2004, pp:997-1004 [Conf ] Z. Du , Alexandros Stamatakis , F. Lin , Usman Roshan , Luay Nakhleh Parallel Divide-and-Conquer Phylogeny Reconstruction by Maximum Likelihood. [Citation Graph (0, 0)][DBLP ] HPCC, 2005, pp:776-785 [Conf ] Alexandros Stamatakis An Efficient Program for Phylogenetic Inference Using Simulated Annealing. [Citation Graph (0, 0)][DBLP ] IPDPS, 2005, pp:- [Conf ] Alexandros Stamatakis , Thomas Ludwig 0002 Phylogenetic Tree Inference on PC Architectures with AxML/PAxML. [Citation Graph (0, 0)][DBLP ] IPDPS, 2003, pp:157- [Conf ] Alexandros Stamatakis , Harald Meier , Thomas Ludwig 0002 New Fast and Accurate Heuristics for Inference of Large Phylogenetic Trees. [Citation Graph (0, 0)][DBLP ] IPDPS, 2004, pp:- [Conf ] Alexandros Stamatakis Phylogenetic models of rate heterogeneity: a high performance computing perspective. [Citation Graph (0, 0)][DBLP ] IPDPS, 2006, pp:- [Conf ] Adam Arvelakis , Martin Reczko , Alexandros Stamatakis , Alkiviadis Symeonidis , Ioannis G. Tollis Using Treemaps to Visualize Phylogenetic Trees. [Citation Graph (0, 0)][DBLP ] ISBMDA, 2005, pp:283-293 [Conf ] Thomas Ludwig 0002 , Markus Lindermeier , Alexandros Stamatakis , Günther Rackl Tool Environments in CORBA-Based Medical High Performance Computing. [Citation Graph (0, 0)][DBLP ] PaCT, 2001, pp:447-455 [Conf ] Alexandros Stamatakis , Markus Lindermeier , Michael Ott , Thomas Ludwig 0002 , Harald Meier DAxML: A Program for Distributed Computation of Phylogenetic Trees Based on Load Managed CORBA. [Citation Graph (0, 0)][DBLP ] PaCT, 2003, pp:538-548 [Conf ] Alexandros Stamatakis , Michael Ott , Thomas Ludwig 0002 RAxML-OMP: An Efficient Program for Phylogenetic Inference on SMPs. [Citation Graph (0, 0)][DBLP ] PaCT, 2005, pp:288-302 [Conf ] Maria Charalambous , Pedro Trancoso , Alexandros Stamatakis Initial Experiences Porting a Bioinformatics Application to a Graphics Processor. [Citation Graph (0, 0)][DBLP ] Panhellenic Conference on Informatics, 2005, pp:415-425 [Conf ] Filip Blagojevic , Dimitrios S. Nikolopoulos , Alexandros Stamatakis , Christos D. Antonopoulos Dynamic multigrain parallelization on the cell broadband engine. [Citation Graph (0, 0)][DBLP ] PPOPP, 2007, pp:90-100 [Conf ] Alexandros Stamatakis , Thomas Ludwig 0002 , Harald Meier A fast program for maximum likelihood-based inference of large phylogenetic trees. [Citation Graph (0, 0)][DBLP ] SAC, 2004, pp:197-201 [Conf ] Alexandros Stamatakis , Thomas Ludwig 0002 , Harald Meier , Marty J. Wolf Accelerating parallel maximum likelihood-based phylogenetic tree calculations using subtree equality vectors. [Citation Graph (0, 0)][DBLP ] SC, 2002, pp:1-16 [Conf ] David A. Bader , Usman Roshan , Alexandros Stamatakis Computational Grand Challenges in Assembling the Tree of Life: Problems and Solutions. [Citation Graph (0, 0)][DBLP ] Advances in Computers, 2006, v:68, n:, pp:128-179 [Journal ] Alexandros Stamatakis , Thomas Ludwig 0002 , Harald Meier RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 2005, v:21, n:4, pp:456-463 [Journal ] Alexandros Stamatakis RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 2006, v:22, n:21, pp:2688-2690 [Journal ] Alexandros Stamatakis , Thomas Ludwig 0002 , Harald Meier The AxML program family for maximum likelihood-based phylogenetic tree inference. [Citation Graph (0, 0)][DBLP ] Concurrency - Practice and Experience, 2004, v:16, n:9, pp:975-988 [Journal ] Alexandros Stamatakis , Thomas Ludwig 0002 , Harald Meier RAxML-II: a program for sequential, parallel and distributed inference of large phylogenetic trees. [Citation Graph (0, 0)][DBLP ] Concurrency and Computation: Practice and Experience, 2005, v:17, n:14, pp:1705-1723 [Journal ] Thomas Ludwig 0002 , Markus Lindermeier , Alexandros Stamatakis , Günther Rackl Tool environments in CORBA-based medical high-performance computing. [Citation Graph (0, 0)][DBLP ] Future Generation Comp. Syst., 2002, v:18, n:6, pp:841-847 [Journal ] Alexandros Stamatakis , Markus Lindermeier , Michael Ott , Thomas Ludwig 0002 , Harald Meier DRAxML at home: a distributed program for computation of large phylogenetic trees. [Citation Graph (0, 0)][DBLP ] Future Generation Comp. Syst., 2005, v:21, n:4, pp:725-730 [Journal ] Günther Rackl , Thomas Ludwig 0002 , Markus Lindermeier , Alexandros Stamatakis Efficiently building on-line tools for distributed heterogeneous environments. [Citation Graph (0, 0)][DBLP ] Scientific Programming, 2002, v:10, n:1, pp:67-74 [Journal ] Filip Blagojevic , Alexandros Stamatakis , Christos D. Antonopoulos , Dimitrios S. Nikolopoulos RAxML-Cell: Parallel Phylogenetic Tree Inference on the Cell Broadband Engine. [Citation Graph (0, 0)][DBLP ] IPDPS, 2007, pp:1-10 [Conf ] Alexandros Stamatakis , Filip Blagojevic , Dimitrios S. Nikolopoulos , Christos D. Antonopoulos Exploring New Search Algorithms and Hardware for Phylogenetics: RAxML Meets the IBM Cell. [Citation Graph (0, 0)][DBLP ] VLSI Signal Processing, 2007, v:48, n:3, pp:271-286 [Journal ] Efficient PC-FPGA Communication over Gigabit Ethernet. [Citation Graph (, )][DBLP ] A reconfigurable architecture for the Phylogenetic Likelihood Function. [Citation Graph (, )][DBLP ] Fine-grain Parallelism Using Multi-core, Cell/BE, and GPU Systems: Accelerating the Phylogenetic Likelihood Function. [Citation Graph (, )][DBLP ] Load Balance in the Phylogenetic Likelihood Kernel. [Citation Graph (, )][DBLP ] Exploring FPGAs for accelerating the phylogenetic likelihood function. [Citation Graph (, )][DBLP ] Accuracy and Performance of Single versus Double Precision Arithmetics for Maximum Likelihood Phylogeny Reconstruction. [Citation Graph (, )][DBLP ] How Many Bootstrap Replicates Are Necessary?. [Citation Graph (, )][DBLP ] Large-scale maximum likelihood-based phylogenetic analysis on the IBM BlueGene/L. [Citation Graph (, )][DBLP ] Exploiting Fine-Grained Parallelism in the Phylogenetic Likelihood Function with MPI, Pthreads, and OpenMP: A Performance Study. [Citation Graph (, )][DBLP ] Time and memory efficient likelihood-based tree searches on phylogenomic alignments with missing data. [Citation Graph (, )][DBLP ] AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa. [Citation Graph (, )][DBLP ] Search in 0.032secs, Finished in 0.034secs