The SCEAS System
Navigation Menu

Search the dblp DataBase

Title:
Author:

Peter D. Karp: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Vinay K. Chaudhri, Adam Farquhar, Richard Fikes, Peter D. Karp, James Rice
    OKBC: A Programmatic Foundation for Knowledge Base Interoperability. [Citation Graph (1, 0)][DBLP]
    AAAI/IAAI, 1998, pp:600-607 [Conf]
  2. Suzanne M. Paley, John D. Lowrance, Peter D. Karp
    A Generic Knowledge-Base Browser and Editor. [Citation Graph (0, 0)][DBLP]
    AAAI/IAAI, 1997, pp:1045-1051 [Conf]
  3. Peter D. Karp, Suzanne M. Paley, Ira Greenberg
    A Storage System for Scalable Knowledge Representation. [Citation Graph (0, 0)][DBLP]
    CIKM, 1994, pp:97-104 [Conf]
  4. Peter D. Karp
    Pathway Bioinformatics. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:27- [Conf]
  5. Araceli M. Huerta, Julio Collado-Vides, Peter D. Karp, Kathleen Klose
    Three Models of Gene Regulation in E.coli. [Citation Graph (0, 0)][DBLP]
    German Conference on Bioinformatics, 1996, pp:64-67 [Conf]
  6. Peter D. Karp, Karen L. Myers, Thomas R. Gruber
    The Generic Frame Protocol. [Citation Graph (0, 0)][DBLP]
    IJCAI (1), 1995, pp:768-774 [Conf]
  7. Peter D. Karp, Suzanne M. Paley
    Knowledge Representation in the Large. [Citation Graph (0, 0)][DBLP]
    IJCAI (1), 1995, pp:751-758 [Conf]
  8. Marie desJardins, Peter D. Karp, Markus Krummenacker, Thomas J. Lee, Christos A. Ouzounis
    Prediction of Enzyme Classification from Protein Sequence without the Use of Sequence Similarity. [Citation Graph (0, 0)][DBLP]
    ISMB, 1997, pp:92-99 [Conf]
  9. Peter D. Karp, Christos A. Ouzounis, Suzanne M. Paley
    HinCyc: A Knowledge Base of the Complete Genome and Metabolic Pathways of H. influenzae. [Citation Graph (0, 0)][DBLP]
    ISMB, 1996, pp:116-124 [Conf]
  10. Peter D. Karp, Suzanne M. Paley
    Representations of Metabolic Knowledge: Pathways. [Citation Graph (0, 0)][DBLP]
    ISMB, 1994, pp:203-211 [Conf]
  11. Peter D. Karp, Suzanne M. Paley, Pedro Romero
    The Pathway Tools software. [Citation Graph (0, 0)][DBLP]
    ISMB, 2002, pp:225-232 [Conf]
  12. Peter D. Karp, Monica Riley
    Representations of Metabolic Knowledge. [Citation Graph (0, 0)][DBLP]
    ISMB, 1993, pp:207-215 [Conf]
  13. Robin McEntire, Peter D. Karp, Neil F. Abernethy, David Benton, Gregg Helt, Matt DeJongh, Robert Kent, Anthony Kosky, Suzanna Lewis, Dan Hodnett, Eric P. Neumann, Frank Olken, Dhiraj K. Pathak, Peter Tarczy-Hornoch, Luca Toldo, Thodoros Topaloglou
    An Evaluation of Ontology Exchange Languages for Bioinformatics. [Citation Graph (0, 0)][DBLP]
    ISMB, 2000, pp:239-250 [Conf]
  14. Vinay K. Chaudhri, Peter D. Karp
    Querying Schema Information. [Citation Graph (0, 0)][DBLP]
    KRDB, 1997, pp:4-4 [Conf]
  15. Peter D. Karp, Eric P. Neumann, Alexander J. Hartemink, Pedro Romero
    Genome, Pathway, and Interaction Bioinformatics - Session Introduction. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2003, pp:101-103 [Conf]
  16. Peter D. Karp, Eric P. Neumann, Pedro Romero
    Genome, Pathway and Interaction Bioinformatics - Session Introduction. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2001, pp:420-421 [Conf]
  17. Peter D. Karp, Suzanne M. Paley, Cynthia J. Krieger, Peifen Zhang
    An Evidence Ontology for Use in Pathway/Genome Databases. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2004, pp:190-201 [Conf]
  18. Peter D. Karp, Pedro Romero, Eric P. Neumann
    Genome, Pathway and Interaction Bioinformatics - Session Introduction. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2002, pp:398-399 [Conf]
  19. Pedro Romero, Peter D. Karp
    Nutrition-Related Analysis of Pathway/Genome Databases. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2001, pp:470-482 [Conf]
  20. Peter D. Karp
    Hypothesis Formation and Qualitative Reasoning in Molecular Biology. [Citation Graph (0, 0)][DBLP]
    AI Magazine, 1990, v:11, n:4, pp:9-10 [Journal]
  21. Ronald G. Forsythe Jr., Peter D. Karp, Michael L. Mavrovouniotis
    Estimation of equilibrium constants using automated group contribution methods. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1997, v:13, n:5, pp:537-543 [Journal]
  22. Peter D. Karp
    An ontology for biological function based on molecular interactions. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2000, v:16, n:3, pp:269-285 [Journal]
  23. Peter D. Karp
    Artificial intelligence methods for theory representation and hypothesis formation. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1991, v:7, n:3, pp:301-308 [Journal]
  24. Peter D. Karp
    A knowledge base of the chemical compounds of intermediary metabolism. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1992, v:8, n:4, pp:347-357 [Journal]
  25. Peter D. Karp, Suzanne M. Paley, Jingchun Zhu
    Database verification studies of SWISS-PROT and GenBank. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2001, v:17, n:6, pp:526-532 [Journal]
  26. Markus Krummenacker, Suzanne M. Paley, Lukas A. Mueller, Thomas Yan, Peter D. Karp
    Querying and computing with BioCyc databases. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:16, pp:3454-3455 [Journal]
  27. Suzanne M. Paley, Peter D. Karp
    Evaluation of computational metabolic-pathway predictions for Helicobacter pylori. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2002, v:18, n:5, pp:715-724 [Journal]
  28. Pedro Romero, Peter D. Karp
    Using functional and organizational information to improve genome-wide computational prediction of transcription units on pathway-genome databases. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:5, pp:709-717 [Journal]
  29. Iwei Yeh, Peter D. Karp, Natalya Fridman Noy, Russ B. Altman
    Knowledge acquisition, consistency checking and concurrency control for Gene Ontology (GO). [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:2, pp:241-248 [Journal]
  30. Michelle L. Green, Peter D. Karp
    A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:76- [Journal]
  31. Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Priyanka Gupta, David W. J. Stringer-Calvert, Jessica D. Tenenbaum, Peter D. Karp
    BioWarehouse: a bioinformatics database warehouse toolkit. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2006, v:7, n:, pp:170- [Journal]
  32. Heladia Salgado, Alberto Santos-Zavaleta, Socorro Gama-Castro, Martín Peralta-Gil, Mónica I. Peñaloza-Spínola, Agustino Martínez-Antonio, Peter D. Karp, Julio Collado-Vides
    The comprehensive updated regulatory network of Escherichia coli K-12. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2006, v:7, n:, pp:5- [Journal]
  33. Peter D. Karp, Michael L. Mavrovouniotis
    Representing, Analyzing, and Synthesizing Biochemical Pathways. [Citation Graph (0, 0)][DBLP]
    IEEE Expert, 1994, v:9, n:2, pp:11-21 [Journal]
  34. Peter D. Karp
    A Strategy for Database Interoperation. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1995, v:2, n:4, pp:573-586 [Journal]
  35. Peter D. Karp, Suzanne M. Paley
    Integrated Access to Metabolic and Genomic Data. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1996, v:3, n:1, pp:191-0 [Journal]
  36. Peter D. Karp, Vinay K. Chaudhri, Suzanne M. Paley
    A Collaborative Environment for Authoring Large Knowledge Bases. [Citation Graph (0, 0)][DBLP]
    J. Intell. Inf. Syst., 1999, v:13, n:3, pp:155-194 [Journal]
  37. Peter D. Karp, John D. Lowrance, Thomas M. Strat, David E. Wilkins
    The Grasper-CL Graph Management System. [Citation Graph (0, 0)][DBLP]
    Lisp and Symbolic Computation, 1994, v:7, n:4, pp:251-290 [Journal]
  38. Peter D. Karp
    Design Methods for Scientific Hypothesis Formation and Their Application to Molecular Biology. [Citation Graph (0, 0)][DBLP]
    Machine Learning, 1993, v:12, n:, pp:89-116 [Journal]
  39. Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole
    The MetaCyc Database. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2002, v:30, n:1, pp:59-61 [Journal]
  40. Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole
    EcoCyc: an encyclopedia of Escherichia coli genes and metabolism. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1996, v:24, n:1, pp:32-39 [Journal]
  41. Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole, Markus Krummenacker
    EcoCyc: Enyclopedia of Escherichia coli Genes and Metabolism. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1997, v:25, n:1, pp:43-51 [Journal]
  42. Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole, Markus Krummenacker
    EcoCyc: Encyclopedia of Escherichia coli genes and metabolism. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1998, v:26, n:1, pp:50-53 [Journal]
  43. Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole, Markus Krummenacker
    Eco Cyc: encyclopedia of Escherichia coli genes and metabolism. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1999, v:27, n:1, pp:55-58 [Journal]
  44. Peter D. Karp, Monica Riley, Milton H. Saier Jr., Ian T. Paulsen, Julio Collado-Vides, Suzanne M. Paley, Alida Pellegrini-Toole, César Bonavides, Socorro Gama-Castro
    The EcoCyc Database. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2002, v:30, n:1, pp:56-58 [Journal]
  45. Peter D. Karp, Monica Riley, Milton H. Saier Jr., Ian T. Paulsen, Suzanne M. Paley, Alida Pellegrini-Toole
    The EcoCyc and MetaCyc databases. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2000, v:28, n:1, pp:56-59 [Journal]
  46. Cynthia J. Krieger, Peifen Zhang, Lukas A. Mueller, Alfred Wang, Suzanne M. Paley, Martha Arnaud, John Pick, Seung Yon Rhee, Peter D. Karp
    MetaCyc: a multiorganism database of metabolic pathways and enzymes. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Database-Issue, pp:438-442 [Journal]
  47. Ingrid M. Keseler, Julio Collado-Vides, Socorro Gama-Castro, John Ingraham, Suzanne M. Paley, Ian T. Paulsen, Martín Peralta-Gil, Peter D. Karp
    EcoCyc: a comprehensive database resource for Escherichia coli. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Database-Issue, pp:334-337 [Journal]
  48. Ron Caspi, Hartmut Foerster, Carol A. Fulcher, Rebecca Hopkinson, John Ingraham, Pallavi Kaipa, Markus Krummenacker, Suzanne M. Paley, John Pick, Seung Yon Rhee, Christophe Tissier, Peifen Zhang, Peter D. Karp
    MetaCyc: a multiorganism database of metabolic pathways and enzymes. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Database-Issue, pp:511-516 [Journal]
  49. Peter D. Karp
    What Database Management System(s) Should Be Employed in Bioinformatics Applications? [Citation Graph (0, 0)][DBLP]
    OMICS, 2003, v:7, n:1, pp:35-36 [Journal]

  50. BioWarehouse: Relational Integration of Eleven Bioinformatics Databases and Formats. [Citation Graph (, )][DBLP]


  51. Using genome-context data to identify specific types of functional associations in pathway/genome databases. [Citation Graph (, )][DBLP]


  52. Annotation-based inference of transporter function. [Citation Graph (, )][DBLP]


  53. Development of Large Scientific Knowledge Bases. [Citation Graph (, )][DBLP]


  54. Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology. [Citation Graph (, )][DBLP]


  55. A survey of orphan enzyme activities. [Citation Graph (, )][DBLP]


  56. Machine learning methods for metabolic pathway prediction. [Citation Graph (, )][DBLP]


Search in 0.006secs, Finished in 0.008secs
NOTICE1
System may not be available sometimes or not working properly, since it is still in development with continuous upgrades
NOTICE2
The rankings that are presented on this page should NOT be considered as formal since the citation info is incomplete in DBLP
 
System created by asidirop@csd.auth.gr [http://users.auth.gr/~asidirop/] © 2002
for Data Engineering Laboratory, Department of Informatics, Aristotle University © 2002