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Tim J. P. Hubbard :
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Andreas Prlic , Ewan Birney , Tony Cox , Thomas A. Down , Robert D. Finn , Stefan Gräf , David K. Jackson , Andreas Kähäri , Eugene Kulesha , Roger Pettett , James Smith , Jim Stalker , Tim J. P. Hubbard The Distributed Annotation System for Integration of Biological Data. [Citation Graph (0, 0)][DBLP ] DILS, 2006, pp:195-203 [Conf ] Andreas Prlic , Thomas A. Down , Tim J. P. Hubbard Adding Some SPICE to DAS. [Citation Graph (0, 0)][DBLP ] ECCB/JBI, 2005, pp:41- [Conf ] Tim J. P. Hubbard Biological information: making it accessible and integrated (and trying to make sense of it). [Citation Graph (0, 0)][DBLP ] ECCB, 2002, pp:140-140 [Conf ] Tim J. P. Hubbard Use of beta-strand Interaction Pseudo-Potentials in Protein Structure Prediction and Modeling. [Citation Graph (0, 0)][DBLP ] HICSS (5), 1994, pp:336-344 [Conf ] Steven E. Brenner , Tim J. P. Hubbard A Specification for Defining and Annotating Regions of Macromolecular Structures. [Citation Graph (0, 0)][DBLP ] ISMB, 1995, pp:66-74 [Conf ] Diego di Bernardo , Thomas Down , Tim J. P. Hubbard ddbRNA: detection of conserved secondary structures in multiple alignments. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 2003, v:19, n:13, pp:1606-1611 [Journal ] Raphael Leplae , Tim J. P. Hubbard MaxBench: evaluation of sequence and structure comparison methods. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 2002, v:18, n:3, pp:494-495 [Journal ] Matthew R. Pocock , Tim J. P. Hubbard A browser for expression data. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 2000, v:16, n:4, pp:402-403 [Journal ] Matthew R. Pocock , Tim J. P. Hubbard , Ewan Birney SPEM: a parser for EMBL style flat file database entries. [Citation Graph (0, 0)][DBLP ] Bioinformatics, 1998, v:14, n:9, pp:823-824 [Journal ] Thomas A. Down , Tim J. P. Hubbard What can we learn from noncoding regions of similarity between genomes? [Citation Graph (0, 0)][DBLP ] BMC Bioinformatics, 2004, v:5, n:, pp:131- [Journal ] Antonina Andreeva , Dave Howorth , Steven E. Brenner , Tim J. P. Hubbard , Cyrus Chothia , Alexey G. Murzin SCOP database in 2004: refinements integrate structure and sequence family data. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2004, v:32, n:Database-Issue, pp:226-229 [Journal ] Ewan Birney , T. Daniel Andrews , Paul Bevan , Mario Cáccamo , Graham Cameron , Yuan Chen , Laura Clarke , G. Coates , Tony Cox , James A. Cuff , Val Curwen , Tim Cutts , Thomas Down , Richard Durbin , Eduardo Eyras , X. M. Fernandez-Suarez , P. Gane , B. Gibbins , James Gilbert , Martin Hammond , H. Hotz , V. Iyer , Andreas Kähäri , K. Jekosch , Arek Kasprzyk , Damian Keefe , S. Keenan , Heikki Lehväslaiho , Graham P. McVicker , Craig Melsopp , Patrick Meidl , Emmanuel Mongin , Roger Pettett , Simon C. Potter , Glenn Proctor , Mark Rae , Stephen M. J. Searle , Guy Slater , Damian Smedley , James Smith , William Spooner , Arne Stabenau , Jim Stalker , R. Storey , Abel Ureta-Vidal , Cara Woodwark , Michele E. Clamp , Tim J. P. Hubbard Ensembl 2004. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2004, v:32, n:Database-Issue, pp:468-470 [Journal ] Michele E. Clamp , T. Daniel Andrews , Daniel Barker , Paul Bevan , Graham Cameron , Yuan Chen , Laura Clarke , Tony Cox , James A. Cuff , Val Curwen , Thomas Down , Richard Durbin , Eduardo Eyras , James Gilbert , Martin Hammond , Tim J. P. Hubbard , Arek Kasprzyk , Damian Keefe , Heikki Lehväslaiho , V. Iyer , Craig Melsopp , Emmanuel Mongin , Roger Pettett , Simon C. Potter , Alastair Rust , Esther Schmidt , Stephen M. J. Searle , Guy Slater , James Smith , William Spooner , Arne Stabenau , Jim Stalker , Elia Stupka , Abel Ureta-Vidal , Imre Vastrik , Ewan Birney Ensembl 2002: accommodating comparative genomics. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2003, v:31, n:1, pp:38-42 [Journal ] Loredana Lo Conte , Bart Ailey , Tim J. P. Hubbard , Steven E. Brenner , Alexey G. Murzin , Cyrus Chothia SCOP: a Structural Classification of Proteins database. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2000, v:28, n:1, pp:257-259 [Journal ] Loredana Lo Conte , Steven E. Brenner , Tim J. P. Hubbard , Cyrus Chothia , Alexey G. Murzin SCOP database in 2002: refinements accommodate structural genomics. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2002, v:30, n:1, pp:264-267 [Journal ] Tim J. P. Hubbard , Bart Ailey , Steven E. Brenner , Alexey G. Murzin , Cyrus Chothia SCOP: a Structural Classification of Proteins database. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 1999, v:27, n:1, pp:254-256 [Journal ] Tim J. P. Hubbard , Alexey G. Murzin , Steven E. Brenner , Cyrus Chothia SCOP: a structural classification of proteins database. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 1997, v:25, n:1, pp:236-239 [Journal ] Tim J. P. Hubbard , Daniel Barker , Ewan Birney , Graham Cameron , Yuan Chen , Laura Clarke , Tony Cox , James A. Cuff , Val Curwen , Thomas Down , Richard Durbin , Eduardo Eyras , James Gilbert , Martin Hammond , Lukasz Huminiecki , Arek Kasprzyk , Heikki Lehväslaiho , Philip Lijnzaad , Craig Melsopp , Emmanuel Mongin , Roger Pettett , Matthew R. Pocock , Simon C. Potter , Alastair Rust , Esther Schmidt , Stephen M. J. Searle , Guy Slater , James Smith , William Spooner , Arne Stabenau , Jim Stalker , Elia Stupka , Abel Ureta-Vidal , Imre Vastrik , Michele E. Clamp The Ensembl genome database project. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2002, v:30, n:1, pp:38-41 [Journal ] Tim J. P. Hubbard , D. Andrews , Mario Cáccamo , Graham Cameron , Yuan Chen , Michele E. Clamp , Laura Clarke , G. Coates , Tony Cox , Fiona Cunningham , Val Curwen , Tim Cutts , Thomas Down , Richard Durbin , X. M. Fernandez-Suarez , James Gilbert , Martin Hammond , J. Herrero , H. Hotz , K. Howe , V. Iyer , K. Jekosch , Andreas Kähäri , Arek Kasprzyk , Damian Keefe , S. Keenan , Felix Kokocinski , D. London , I. Longden , Graham P. McVicker , Craig Melsopp , Patrick Meidl , Simon C. Potter , Glenn Proctor , Mark Rae , D. Rios , M. Schuster , Stephen M. J. Searle , J. Severin , Guy Slater , Damian Smedley , James Smith , William Spooner , Arne Stabenau , Jim Stalker , R. Storey , S. Trevanion , Abel Ureta-Vidal , J. Vogel , S. White , Cara Woodwark , Ewan Birney Ensembl 2005. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2005, v:33, n:Database-Issue, pp:447-453 [Journal ] J. L. Ashurst , C.-K. Chen , J. G. R. Gilbert , K. Jekosch , S. Keenan , Patrick Meidl , Stephen M. J. Searle , Jim Stalker , R. Storey , S. Trevanion , L. Wilming , Tim J. P. Hubbard The Vertebrate Genome Annotation (Vega) database. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2005, v:33, n:Database-Issue, pp:459-465 [Journal ] Ewan Birney , T. Daniel Andrews , Mario Cáccamo , Yuan Chen , Laura Clarke , G. Coates , Tony Cox , Fiona Cunningham , Val Curwen , Tim Cutts , Thomas Down , Richard Durbin , X. M. Fernandez-Suarez , Paul Flicek , Stefan Gräf , Martin Hammond , J. Herrero , K. Howe , V. Iyer , K. Jekosch , Andreas Kähäri , Arek Kasprzyk , Damian Keefe , Felix Kokocinski , Eugene Kulesha , D. London , I. Longden , Craig Melsopp , Patrick Meidl , B. Overduin , A. Parker , Glenn Proctor , Andreas Prlic , Mark Rae , D. Rios , Seth Redmond , M. Schuster , I. Sealy , Stephen M. J. Searle , J. Severin , Guy Slater , Damian Smedley , James Smith , Arne Stabenau , Jim Stalker , S. Trevanion , Abel Ureta-Vidal , J. Vogel , S. White , Cara Woodwark , Tim J. P. Hubbard Ensembl 2006. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2006, v:34, n:Database-Issue, pp:556-561 [Journal ] Antonina Andreeva , Andreas Prlic , Tim J. P. Hubbard , Alexey G. Murzin SISYPHUS - structural alignments for proteins with non-trivial relationships. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2007, v:35, n:Database-Issue, pp:253-259 [Journal ] Tim J. P. Hubbard , B. L. Aken , K. Beal , B. Ballester , Mario Cáccamo , Yuan Chen , Laura Clarke , G. Coates , Fiona Cunningham , Tim Cutts , Thomas Down , S. C. Dyer , S. Fitzgerald , J. Fernandez-Banet , Stefan Gräf , S. Haider , Martin Hammond , J. Herrero , R. Holland , K. Howe , N. Johnson , Andreas Kähäri , Damian Keefe , Felix Kokocinski , Eugene Kulesha , Daniel Lawson , I. Longden , Craig Melsopp , Karine Megy , Patrick Meidl , B. Ouverdin , A. Parker , Andreas Prlic , S. Rice , D. Rios , M. Schuster , I. Sealy , J. Severin , Guy Slater , Damian Smedley , G. Spudich , S. Trevanion , A. Vilella , J. Vogel , S. White , M. Wood , Tony Cox , Val Curwen , Richard Durbin , X. M. Fernandez-Suarez , Paul Flicek , Arek Kasprzyk , Glenn Proctor , Stephen M. J. Searle , James Smith , Abel Ureta-Vidal , Ewan Birney Ensembl 2007. [Citation Graph (0, 0)][DBLP ] Nucleic Acids Research, 2007, v:35, n:Database-Issue, pp:610-617 [Journal ] The Protein Feature Ontology: a tool for the unification of protein feature annotations. [Citation Graph (, )][DBLP ] iMotifs: an integrated sequence motif visualization and analysis environment. [Citation Graph (, )][DBLP ] Integrating sequence and structural biology with DAS. [Citation Graph (, )][DBLP ] NestedMICA as an ab initio protein motif discovery tool. [Citation Graph (, )][DBLP ] Integrating biological data - the Distributed Annotation System. [Citation Graph (, )][DBLP ] A machine learning strategy to identify candidate binding sites in human protein-coding sequence. [Citation Graph (, )][DBLP ] Metamotifs - a generative model for building families of nucleotide position weight matrices. [Citation Graph (, )][DBLP ] Search in 0.002secs, Finished in 0.456secs