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David S. Wishart: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Brett Poulin, Roman Eisner, Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Alona Fyshe, Brandon Pearcy, Cam Macdonell, John Anvik
    Visual Explanation of Evidence with Additive Classifiers. [Citation Graph (0, 0)][DBLP]
    AAAI, 2006, pp:- [Conf]
  2. Brett Poulin, Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Roman Eisner, Alona Fyshe, Brandon Pearcy, Luca Pireddu
    The Proteome Analyst Suite of Automated Function Prediction Tools. [Citation Graph (0, 0)][DBLP]
    AAAI, 2005, pp:1698-1699 [Conf]
  3. Luca Pireddu, Brett Poulin, Duane Szafron, Paul Lu, David S. Wishart
    Pathway Analyst--Automated Metabolic Pathway Prediction. [Citation Graph (0, 0)][DBLP]
    CIBCB, 2005, pp:243-250 [Conf]
  4. Peter M. Hooper, Haiyan Zhang, David S. Wishart
    Prediction of genetic structure in eukaryotic DNA using reference point logistic regression and sequence alignment. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2000, v:16, n:5, pp:425-438 [Journal]
  5. Zhiyong Lu, Duane Szafron, Russell Greiner, Paul Lu, David S. Wishart, Brett Poulin, John Anvik, Cam Macdonell, Roman Eisner
    Predicting subcellular localization of proteins using machine-learned classifiers. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:4, pp:- [Journal]
  6. Paul Stothard, David S. Wishart
    Circular genome visualization and exploration using CGView. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:4, pp:537-539 [Journal]
  7. David S. Wishart, Robert F. Boyko, Brian D. Sykes
    Constrained multiple sequence alignment using XALIGN. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1994, v:10, n:6, pp:687-688 [Journal]
  8. David S. Wishart, Robert F. Boyko, Leigh Willard, Frederic M. Richards, Brian D. Sykes
    SEQSEE: a comprehensive program suite for protein sequence analysis. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1994, v:10, n:2, pp:121-132 [Journal]
  9. David S. Wishart, S. Fortin, David R. Woloschuk, W. Wong, T. Rosborough, Gary H. Van Domselaar, Jonathan Schaeffer, Duane Szafron
    A platform-independent graphical user interface for SEQSEE and XALIGN. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1997, v:13, n:5, pp:561-562 [Journal]
  10. Nelson Young, Zhan Chang, David S. Wishart
    GelScape: a web-based server for interactively annotating, manipulating, comparing and archiving 1D and 2D gel images. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:6, pp:976-978 [Journal]
  11. David S. Wishart, Robert Yang, David Arndt, Peter Tang, Joseph A. Cruz
    Dynamic cellular automata: a simple but powerful approach to cellular simulation. [Citation Graph (0, 0)][DBLP]
    In Silico Biology, 2004, v:5, n:, pp:- [Journal]
  12. Xiaoli Dong, Paul Stothard, Ian J. Forsythe, David S. Wishart
    PlasMapper: a web server for drawing and auto-annotating plasmid maps. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:660-664 [Journal]
  13. Rajarshi Maiti, Gary H. Van Domselaar, Haiyan Zhang, David S. Wishart
    SuperPose: a simple server for sophisticated structural superposition. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:590-594 [Journal]
  14. Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Brett Poulin, Roman Eisner, Zhiyong Lu, John Anvik, Cam Macdonell, Alona Fyshe, David Meeuwis
    Proteome Analyst: custom predictions with explanations in a web-based tool for high-throughput proteome annotations. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:365-371 [Journal]
  15. Shan Sundararaj, Anchi Guo, Bahram Habibi-Nazhad, Melania Rouani, Paul Stothard, Michael Ellison, David S. Wishart
    The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Database-Issue, pp:293-295 [Journal]
  16. Leigh Willard, Anuj Ranjan, Haiyan Zhang, Hassan Monzavi, Robert F. Boyko, Brian D. Sykes, David S. Wishart
    VADAR: a web server for quantitative evaluation of protein structure quality. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3316-3319 [Journal]
  17. Paul Lu, Duane Szafron, Russell Greiner, David S. Wishart, Alona Fyshe, Brandon Pearcy, Brett Poulin, Roman Eisner, Danny Ngo, Nicholas Lamb
    PA-GOSUB: a searchable database of model organism protein sequences with their predicted Gene Ontology molecular function and subcellular localization. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Database-Issue, pp:147-153 [Journal]
  18. Paul Stothard, Gary H. Van Domselaar, Savita Shrivastava, Anchi Guo, Brian O'Neill, Joseph A. Cruz, Michael Ellison, David S. Wishart
    BacMap: an interactive picture atlas of annotated bacterial genomes. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Database-Issue, pp:317-320 [Journal]
  19. Gary H. Van Domselaar, Paul Stothard, Savita Shrivastava, Joseph A. Cruz, Anchi Guo, Xiaoli Dong, Paul Lu, Duane Szafron, Russell Greiner, David S. Wishart
    BASys: a web server for automated bacterial genome annotation. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Web-Server-Issue, pp:455-459 [Journal]
  20. Rajarshi Maiti, Gary H. Van Domselaar, David S. Wishart
    MovieMaker: a web server for rapid rendering of protein motions and interactions. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Web-Server-Issue, pp:358-362 [Journal]
  21. Mark V. Berjanskii, Stephen Neal, David S. Wishart
    PREDITOR: a web server for predicting protein torsion angle restraints. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Web-Server-Issue, pp:63-69 [Journal]
  22. David S. Wishart, Craig Knox, Anchi Guo, Savita Shrivastava, Murtaza Hassanali, Paul Stothard, Zhan Chang, Jennifer Woolsey
    DrugBank: a comprehensive resource for in silico drug discovery and exploration. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Database-Issue, pp:668-672 [Journal]
  23. David S. Wishart, Dan Tzur, Craig Knox, Roman Eisner, Anchi Guo, Nelson Young, Dean Cheng, Kevin Jewell, David Arndt, Summit Sawhney, Chris Fung, Lisa Nikolai, Mike Lewis, Marie-Aude Coutouly, Ian J. Forsythe, Peter Tang, Savita Shrivastava, Kevin Jeroncic, Paul Stothard, Godwin Amegbey, David Block, David. D. Hau, James Wagner, Jessica Miniaci, Melisa Clements, Mulu Gebremedhin, Natalie Guo, Ying Zhang, Gavin E. Duggan, Glen D. MacInnis, Alim M. Weljie, Reza Dowlatabadi, Fiona Bamforth, Derrick Clive, Russell Greiner, Liang Li, Tom Marrie, Brian D. Sykes, Hans J. Vogel, Lori Querengesser
    HMDB: the Human Metabolome Database. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2007, v:35, n:Database-Issue, pp:521-526 [Journal]

  24. Session Introduction. [Citation Graph (, )][DBLP]


  25. Biospider: A Web Server for Automating Metabolome Annotations. [Citation Graph (, )][DBLP]


  26. Current Progress in computational metabolomics. [Citation Graph (, )][DBLP]


  27. Protein contact order prediction from primary sequences. [Citation Graph (, )][DBLP]


  28. MetaboMiner - semi-automated identification of metabolites from 2D NMR spectra of complex biofluids. [Citation Graph (, )][DBLP]


  29. Improving the accuracy of protein secondary structure prediction using structural alignment. [Citation Graph (, )][DBLP]


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