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Ilya N. Shindyalov: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Julia V. Ponomarenko, Philip E. Bourne, Ilya N. Shindyalov
    Building an automated classification of DNA-binding protein domains. [Citation Graph (0, 0)][DBLP]
    ECCB, 2002, pp:192-201 [Conf]
  2. Ilya N. Shindyalov, Weider Chang, J. A. Cooper, Philip E. Bourne
    Design and use of a software framework to obtain information derived from macromolecular structure data. [Citation Graph (0, 0)][DBLP]
    HICSS (5), 1995, pp:207-216 [Conf]
  3. Weider Chang, Ilya N. Shindyalov, Calton Pu, Philip E. Bourne
    Design and Application of a C++ Macromolecular Class Library. [Citation Graph (0, 0)][DBLP]
    ISMB, 1994, pp:70-77 [Conf]
  4. Nikolay A. Kolchanov, Oleg V. Vishnevsky, Vladimir N. Babenko, Alexander E. Kel, Ilya N. Shindyalov
    Identification of CDNA Sequences by Specific Oligonucleotide Sets - A Computer Tool and Application. [Citation Graph (0, 0)][DBLP]
    ISMB, 1995, pp:206-214 [Conf]
  5. Dmitry Pekurovsky, Ilya N. Shindyalov, Philip E. Bourne
    Parallel Processing on Large Redudant Biological Data Sets: Protein Structures Classification with CEPAR. [Citation Graph (0, 0)][DBLP]
    PARCO, 2003, pp:661-668 [Conf]
  6. Philip E. Bourne, C. K. J. Allerston, Werner G. Krebs, Wilfred W. Li, Ilya N. Shindyalov, Adam Godzik, Iddo Friedberg, Tong Liu, David L. Wild, Seungwoo Hwang, Zoubin Ghahramani, Li Chen, John D. Westbrook
    The Status of Structural Genomics Defined Through the Analysis of Current Targets and Structures. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2004, pp:375-386 [Conf]
  7. Chittibabu Guda, Eric D. Scheeff, Philip E. Bourne, Ilya N. Shindyalov
    A New Algorithm for the Alignment of Multiple Protein Structures Using Monte Carlo Optimization. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2001, pp:275-286 [Conf]
  8. Nickolai Alexandrov, Ilya N. Shindyalov
    PDP: protein domain parser. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:3, pp:429-430 [Journal]
  9. Weider Chang, Ilya N. Shindyalov, Calton Pu, Philip E. Bourne
    Design and application of PDBlib, a C++ macromolecular class library. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1994, v:10, n:6, pp:575-586 [Journal]
  10. Dmitry Pekurovsky, Ilya N. Shindyalov, Philip E. Bourne
    A case study of high-throughput biological data processing on parallel platforms. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:12, pp:1940-1947 [Journal]
  11. Ilya N. Shindyalov, Philip E. Bourne
    Protein data representation and query using optimized data decomposition. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1997, v:13, n:5, pp:487-496 [Journal]
  12. Victor B. Strelets, Ilya N. Shindyalov, Nikolay A. Kolchanov, Luciano Milanesi
    Fast, statistically based alignment of amino acid sequences on the base of diagonal fragments of DOT-matrices. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1992, v:8, n:6, pp:529-534 [Journal]
  13. Yuting Jia, T. Gregory Dewey, Ilya N. Shindyalov, Philip E. Bourne
    A New Scoring Function and Associated Statistical Significance for Structure Alignment by CE. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2004, v:11, n:5, pp:787-799 [Journal]
  14. Helen M. Berman, John D. Westbrook, Zukang Feng, Gary Gilliland, T. N. Bhat, Helge Weissig, Ilya N. Shindyalov, Philip E. Bourne
    The Protein Data Bank. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2000, v:28, n:1, pp:235-242 [Journal]
  15. Chittibabu Guda, Sifang Lu, Eric D. Scheeff, Philip E. Bourne, Ilya N. Shindyalov
    CE-MC: a multiple protein structure alignment server. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:100-103 [Journal]
  16. Wilfred W. Li, Boojala V. B. Reddy, John G. Tate, Ilya N. Shindyalov, Philip E. Bourne
    CKAAPs DB: a Conserved Key Amino Acid Positions DataBase. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2002, v:30, n:1, pp:409-411 [Journal]
  17. Wilfred W. Li, Boojala V. B. Reddy, Ilya N. Shindyalov, Philip E. Bourne
    CKAAPs DB: a conserved key amino acid positions database. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2001, v:29, n:1, pp:329-331 [Journal]
  18. Ilya N. Shindyalov, Philip E. Bourne
    A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2001, v:29, n:1, pp:228-229 [Journal]
  19. Chittibabu Guda, Lipika R. Pal, Ilya N. Shindyalov
    DMAPS: a database of multiple alignments for protein structures. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Database-Issue, pp:273-276 [Journal]
  20. Wilfred W. Li, Robert W. Byrnes, Jim Hayes, Adam Birnbaum, Vicente M. Reyes, Atif Shahab, Coleman Mosley, Dmitry Pekurovsky, Greg B. Quinn, Ilya N. Shindyalov, Henri Casanova, Larry Ang, Fran Berman, Peter W. Arzberger, Mark A. Miller, Philip E. Bourne
    The Encyclopedia of Life Project: Grid Software and Deployment. [Citation Graph (0, 0)][DBLP]
    New Generation Comput., 2004, v:22, n:2, pp:- [Journal]

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