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Publications of Author

1. Ruben Abagyan, Serge Batalov, Timothy Cardozo, Maxim Totrov
   From fold recognition to flexible docking. [Citation Graph (0, 0)][DBLP]
   German Conference on Bioinformatics, 1997, pp:9-10 [Conf]
   
2. Juan Fernandez-Recio, Maxim Totrov, Ruben Abagyan
   Screened Charge Electrostatic Model in Protein-Protein Docking Simulations. [Citation Graph (0, 0)][DBLP]
   Pacific Symposium on Biocomputing, 2002, pp:552-565 [Conf]
   
3. Ruben Abagyan
   Computational structural proteomics and virtual ligand screening. [Citation Graph (0, 0)][DBLP]
   RECOMB, 2002, pp:1- [Conf]
   
4. Ruben Abagyan
   Challenges of biomolecular structure prediction (abstract). [Citation Graph (0, 0)][DBLP]
   RECOMB, 1998, pp:1- [Conf]
   
5. Maxim Totrov, Ruben Abagyan
   Derivation of sensitive discrimination potential for virtual ligand screening. [Citation Graph (0, 0)][DBLP]
   RECOMB, 1999, pp:312-320 [Conf]
   
6. Andrew J. Bordner, Ruben Abagyan
   REVCOM: a robust Bayesian method for evolutionary rate estimation. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:10, pp:2315-2321 [Journal]
   
7. Brian Marsden, Ruben Abagyan
   SAD - a normalized structural alignment database: improving sequence-structure alignments. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2004, v:20, n:15, pp:2333-2344 [Journal]
   
8. Levon Budagyan, Ruben Abagyan
   Weighted quality estimates in machine learning. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:21, pp:2597-2603 [Journal]
   
9. José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón
   ADP_EM: fast exhaustive multi-resolution docking for high-throughput coverage. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2007, v:23, n:4, pp:427-433 [Journal]
   
10. José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón
    DFprot: a webtool for predicting local chain deformability. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:7, pp:901-902 [Journal]
    
11. Yingyao Zhou, Ruben Abagyan
    Match-Only Integral Distribution (MOID) Algorithm for high-density oligonucleotide array analysis. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2002, v:3, n:, pp:3- [Journal]
    
12. Patrick Argos, Ruben Abagyan
    The Protein Folding Problem: Finding a Few Minimums in a Near Infinite Space. [Citation Graph (0, 0)][DBLP]
    Computers & Chemistry, 1994, v:18, n:3, pp:225-231 [Journal]
    
13. Timothy Cardozo, Serge Batalov, Ruben Abagyan
    Estimating Local Backbone Structural Deviation in Homology Models. [Citation Graph (0, 0)][DBLP]
    Computers & Chemistry, 2000, v:24, n:1, pp:13-31 [Journal]
    
14. Badry D. Bursulaya, Maxim Totrov, Ruben Abagyan, Charles L. Brooks III
    Comparative study of several algorithms for flexible ligand docking. [Citation Graph (0, 0)][DBLP]
    Journal of Computer-Aided Molecular Design, 2003, v:17, n:11, pp:755-763 [Journal]
    
15. Ruben Abagyan, Maxim Totrov, Dmitry Kuznetsov
    ICM - A New Method for Protein Modeling and Design: Applications to Docking and Strucutre Prediction from the Distorted Native Conformation. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Chemistry, 1994, v:15, n:5, pp:488-506 [Journal]
    
16. Vsevolod Katritch, Maxim Totrov, Ruben Abagyan
    ICFF: A new method to incorporate implicit flexibility into an internal coordinate force field. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Chemistry, 2003, v:24, n:2, pp:254-265 [Journal]
    
17. Maxim Totrov, Ruben Abagyan
    Efficient Parallelization of the Energy, Surface, and Dericative Calculations for Internal Coordinate Mechanics. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Chemistry, 1994, v:15, n:10, pp:1105-1112 [Journal]
    
18. 
    FRODOCK: a new approach for fast rotational protein-protein docking. [Citation Graph (, )][DBLP]