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Bin Ma: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Haizhou Li, Bin Ma
    A Phonotactic Language Model for Spoken Language Identification. [Citation Graph (0, 0)][DBLP]
    ACL, 2005, pp:- [Conf]
  2. Jian Liu, Bin Ma, Ming Li
    PRIME: Peptide robust identification from MS/MS spectra. [Citation Graph (0, 0)][DBLP]
    APBC, 2005, pp:181-190 [Conf]
  3. Baozhen Shan, Bin Ma, Kaizhong Zhang, Gilles Lajoie
    Complexities and Algorithms for Glycan Structure Sequencing using Tandem Mass Spectrometry. [Citation Graph (0, 0)][DBLP]
    APBC, 2007, pp:297-306 [Conf]
  4. Xiaolong Yang, Qianbin Chen, Youju Mao, Keping Long, Bin Ma
    Mobility Prediction-Based Wireless Resource Allocation and Reservation. [Citation Graph (0, 0)][DBLP]
    AWCC, 2004, pp:1-11 [Conf]
  5. Miklós Csürös, Bin Ma
    Rapid Homology Search with Two-Stage Extension and Daughter Seeds. [Citation Graph (0, 0)][DBLP]
    COCOON, 2005, pp:104-114 [Conf]
  6. Bin Ma
    A Polynominal Time Approximation Scheme for the Closest Substring Problem. [Citation Graph (0, 0)][DBLP]
    CPM, 2000, pp:99-107 [Conf]
  7. Bin Ma, Lusheng Wang, Ming Li
    Fixed Topology Alignment with Recombination. [Citation Graph (0, 0)][DBLP]
    CPM, 1998, pp:174-188 [Conf]
  8. Bin Ma, Zhuozhi Wang, Kaizhong Zhang
    Alignment between Two Multiple Alignments. [Citation Graph (0, 0)][DBLP]
    CPM, 2003, pp:254-265 [Conf]
  9. Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang
    The Longest Common Subsequence Problem for Arc-Annotated Sequences. [Citation Graph (0, 0)][DBLP]
    CPM, 2000, pp:154-165 [Conf]
  10. Bin Ma, Kaizhong Zhang
    On the Longest Common Rigid Subsequence Problem. [Citation Graph (0, 0)][DBLP]
    CPM, 2005, pp:11-20 [Conf]
  11. Bin Ma, Kaizhong Zhang, Chengzhi Liang
    An Effective Algorithm for the Peptide De Novo Sequencing from MS/MS Spectrum. [Citation Graph (0, 0)][DBLP]
    CPM, 2003, pp:266-277 [Conf]
  12. Jinbo Xu, Daniel G. Brown, Ming Li, Bin Ma
    Optimizing Multiple Spaced Seeds for Homology Search. [Citation Graph (0, 0)][DBLP]
    CPM, 2004, pp:47-58 [Conf]
  13. Kaizhong Zhang, Lusheng Wang, Bin Ma
    Computing Similarity between RNA Structures. [Citation Graph (0, 0)][DBLP]
    CPM, 1999, pp:281-293 [Conf]
  14. Yonghua Han, Bin Ma, Kaizhong Zhang
    SPIDER: Software for Protein Identification from Sequence Tags with De Novo Sequencing Error. [Citation Graph (0, 0)][DBLP]
    CSB, 2004, pp:206-215 [Conf]
  15. Xiaotie Deng, Guojun Li, Zimao Li, Bin Ma, Lusheng Wang
    A PTAS for Distinguishing (Sub)string Selection. [Citation Graph (0, 0)][DBLP]
    ICALP, 2002, pp:740-751 [Conf]
  16. Bin Ma, Lieyu Wu, Kaizhong Zhang
    Improving the Sensitivity and Specificity of Protein Homology Search by Incorporating Predicted Secondary Structures. [Citation Graph (0, 0)][DBLP]
    International Conference on Computational Science (2), 2005, pp:960-967 [Conf]
  17. Kong-Aik Lee, Hanwu Sun, Rong Tong, Bin Ma, Minghui Dong, Changhuai You, Donglai Zhu, Chin-Wei Eugene Koh, Lei Wang, Tomi Kinnunen, Chng Eng Siong, Haizhou Li
    The IIR Submission to CSLP 2006 Speaker Recognition Evaluation. [Citation Graph (0, 0)][DBLP]
    ISCSLP, 2006, pp:494-505 [Conf]
  18. Rong Tong, Bin Ma, Kong-Aik Lee, Changhuai You, Donglai Zhu, Tomi Kinnunen, Hanwu Sun, Minghui Dong, Chng Eng Siong, Haizhou Li
    Fusion of Acoustic and Tokenization Features for Speaker Recognition. [Citation Graph (0, 0)][DBLP]
    ISCSLP, 2006, pp:566-577 [Conf]
  19. Guohui Lin, Bin Ma, Kaizhong Zhang
    Edit distance between two RNA structures. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2001, pp:211-220 [Conf]
  20. Bin Ma, Ming Li, Louxin Zhang
    On reconstructing species trees from gene trees in term of duplications and losses. [Citation Graph (0, 0)][DBLP]
    RECOMB, 1998, pp:182-191 [Conf]
  21. Bin Ma, Haizhou Li
    A phonotactic-semantic paradigm for automatic spoken document classification. [Citation Graph (0, 0)][DBLP]
    SIGIR, 2005, pp:369-376 [Conf]
  22. J. Kevin Lanctot, Ming Li, Bin Ma, Shaojiu Wang, Louxin Zhang
    Distinguishing String Selection Problems. [Citation Graph (0, 0)][DBLP]
    SODA, 1999, pp:633-642 [Conf]
  23. Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vitányi
    The similarity metric. [Citation Graph (0, 0)][DBLP]
    SODA, 2003, pp:863-872 [Conf]
  24. Ming Li, Bin Ma, Louxin Zhang
    Superiority and complexity of the spaced seeds. [Citation Graph (0, 0)][DBLP]
    SODA, 2006, pp:444-453 [Conf]
  25. Ming Li, Bin Ma, Lusheng Wang
    Near optimal multiple alignment within a band in polynomial time. [Citation Graph (0, 0)][DBLP]
    STOC, 2000, pp:425-434 [Conf]
  26. Ming Li, Bin Ma, Lusheng Wang
    Finding Similar Regions in Many Strings. [Citation Graph (0, 0)][DBLP]
    STOC, 1999, pp:473-482 [Conf]
  27. Louxin Zhang, Bin Ma, Lusheng Wang
    Efficient Methods for Inferring Tandem Duplication History. [Citation Graph (0, 0)][DBLP]
    WABI, 2002, pp:97-111 [Conf]
  28. Yonghua Han, Bin Ma, Kaizhong Zhang
    An Automata Approach to Match Gapped Sequence Tags Against Protein Database. [Citation Graph (0, 0)][DBLP]
    CIAA, 2004, pp:167-177 [Conf]
  29. Xin Chen, Ming Li, Bin Ma, John Tromp
    DNACompress: fast and effective DNA sequence compression. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2002, v:18, n:12, pp:1696-1698 [Journal]
  30. Derek Kisman, Ming Li, Bin Ma, Li Wang
    tPatternHunter: gapped, fast and sensitive translated homology search . [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:4, pp:542-544 [Journal]
  31. Bin Ma, John Tromp, Ming Li
    PatternHunter: faster and more sensitive homology search. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2002, v:18, n:3, pp:440-445 [Journal]
  32. Louxin Zhang, Bin Ma, Lusheng Wang, Ying Xu 0002
    Greedy method for inferring tandem duplication history. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:12, pp:1497-1504 [Journal]
  33. Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vitányi
    The similarity metric [Citation Graph (0, 0)][DBLP]
    CoRR, 2001, v:0, n:, pp:- [Journal]
  34. Ming Li, Bin Ma, Lusheng Wang
    On The Closest String and Substring Problems [Citation Graph (0, 0)][DBLP]
    CoRR, 2000, v:0, n:, pp:- [Journal]
  35. Uri Keich, Ming Li, Bin Ma, John Tromp
    On spaced seeds for similarity search. [Citation Graph (0, 0)][DBLP]
    Discrete Applied Mathematics, 2004, v:138, n:3, pp:253-263 [Journal]
  36. Lusheng Wang, Bin Ma, Ming Li
    Fixed topology alignment with recombination. [Citation Graph (0, 0)][DBLP]
    Discrete Applied Mathematics, 2000, v:104, n:1-3, pp:281-300 [Journal]
  37. J. Kevin Lanctot, Ming Li, Bin Ma, Shaojiu Wang, Louxin Zhang
    Distinguishing string selection problems. [Citation Graph (0, 0)][DBLP]
    Inf. Comput., 2003, v:185, n:1, pp:41-55 [Journal]
  38. Yonghua Han, Bin Ma, Kaizhong Zhang
    An automata approach to match gapped sequence tags against protein database. [Citation Graph (0, 0)][DBLP]
    Int. J. Found. Comput. Sci., 2005, v:16, n:3, pp:487-497 [Journal]
  39. Ming Li, Bin Ma, Lusheng Wang
    On the closest string and substring problems. [Citation Graph (0, 0)][DBLP]
    J. ACM, 2002, v:49, n:2, pp:157-171 [Journal]
  40. Jian Liu, Bin Ma, Ming Li
    Prima: Peptide Robust Identification from Ms/ms Spectra. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2006, v:4, n:1, pp:125-138 [Journal]
  41. Daniel G. Brown, Ming Li, Bin Ma
    A Tutorial of Recent Developments in the Seeding of Local Alignment. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2004, v:2, n:4, pp:819-842 [Journal]
  42. Ming Li, Bin Ma, Derek Kisman, John Tromp
    Patternhunter Ii: Highly Sensitive and Fast Homology Search. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2004, v:2, n:3, pp:417-440 [Journal]
  43. Yonghua Han, Bin Ma, Kaizhong Zhang
    Spider: Software for Protein Identification from Sequence Tags with de Novo Sequencing Error. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2005, v:3, n:3, pp:697-716 [Journal]
  44. Bin Ma, Lieyu Wu, Kaizhong Zhang
    Improving the Sensitivity and Specificity of Protein Homology Search by Incorporating Predicted Secondary Structures. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2006, v:4, n:3, pp:709-720 [Journal]
  45. Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang
    A General Edit Distance between RNA Structures. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2002, v:9, n:2, pp:371-388 [Journal]
  46. Bin Ma, Lusheng Wang, Louxin Zhang
    Fitting Distances by Tree Metrics with Increment Error. [Citation Graph (0, 0)][DBLP]
    J. Comb. Optim., 1999, v:3, n:2-3, pp:213-225 [Journal]
  47. Deep Jaitly, Paul E. Kearney, Guo-Hui Lin, Bin Ma
    Methods for reconstructing the history of tandem repeats and their application to the human genome. [Citation Graph (0, 0)][DBLP]
    J. Comput. Syst. Sci., 2002, v:65, n:3, pp:494-507 [Journal]
  48. Bin Ma, Lusheng Wang
    On the Inapproximability of Disjoint Paths and Minimum Steiner Forest with Bandwidth Constraints. [Citation Graph (0, 0)][DBLP]
    J. Comput. Syst. Sci., 2000, v:60, n:1, pp:1-12 [Journal]
  49. Ming Li, Bin Ma, Lusheng Wang
    Finding Similar Regions in Many Sequences. [Citation Graph (0, 0)][DBLP]
    J. Comput. Syst. Sci., 2002, v:65, n:1, pp:73-96 [Journal]
  50. Bin Ma, Kaizhong Zhang, Chengzhi Liang
    An effective algorithm for peptide de novo sequencing from MS/MS spectra. [Citation Graph (0, 0)][DBLP]
    J. Comput. Syst. Sci., 2005, v:70, n:3, pp:418-430 [Journal]
  51. Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang
    The longest common subsequence problem for arc-annotated sequences. [Citation Graph (0, 0)][DBLP]
    J. Discrete Algorithms, 2004, v:2, n:2, pp:257-270 [Journal]
  52. Xiaotie Deng, Guojun Li, Zimao Li, Bin Ma, Lusheng Wang
    Genetic Design of Drugs Without Side-Effects. [Citation Graph (0, 0)][DBLP]
    SIAM J. Comput., 2003, v:32, n:4, pp:1073-1090 [Journal]
  53. Bin Ma, Ming Li, Louxin Zhang
    From Gene Trees to Species Trees. [Citation Graph (0, 0)][DBLP]
    SIAM J. Comput., 2000, v:30, n:3, pp:729-752 [Journal]
  54. Bin Ma, Lusheng Wang, Kaizhong Zhang
    Computing similarity between RNA structures. [Citation Graph (0, 0)][DBLP]
    Theor. Comput. Sci., 2002, v:276, n:1-2, pp:111-132 [Journal]
  55. Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vitányi
    The similarity metric. [Citation Graph (0, 0)][DBLP]
    IEEE Transactions on Information Theory, 2004, v:50, n:12, pp:3250-3264 [Journal]
  56. Sriram Chellappan, Xiaole Bai, Bin Ma, Dong Xuan, Changqing Xu
    Mobility Limited Flip-Based Sensor Networks Deployment. [Citation Graph (0, 0)][DBLP]
    IEEE Trans. Parallel Distrib. Syst., 2007, v:18, n:2, pp:199-211 [Journal]
  57. Lei Xin, Bin Ma, Kaizhong Zhang
    A New Quartet Approach for Reconstructing Phylogenetic Trees: Quartet Joining Method. [Citation Graph (0, 0)][DBLP]
    COCOON, 2007, pp:40-50 [Conf]
  58. Miklós Csürös, Bin Ma
    Rapid Homology Search with Neighbor Seeds. [Citation Graph (0, 0)][DBLP]
    Algorithmica, 2007, v:48, n:2, pp:187-202 [Journal]
  59. Bin Ma, Ming Li
    On the complexity of the spaced seeds. [Citation Graph (0, 0)][DBLP]
    J. Comput. Syst. Sci., 2007, v:73, n:7, pp:1024-1034 [Journal]
  60. Bin Ma, Lusheng Wang, Ming Li
    Near optimal multiple alignment within a band in polynomial time. [Citation Graph (0, 0)][DBLP]
    J. Comput. Syst. Sci., 2007, v:73, n:6, pp:997-1011 [Journal]
  61. Sriram Chellappan, Wenjun Gu, Xiaole Bai, Dong Xuan, Bin Ma, Kaizhong Zhang
    Deploying Wireless Sensor Networks under Limited Mobility Constraints. [Citation Graph (0, 0)][DBLP]
    IEEE Trans. Mob. Comput., 2007, v:6, n:10, pp:1142-1157 [Journal]

  62. PAS: Predicate-Based Authentication Services Against Powerful Passive Adversaries. [Citation Graph (, )][DBLP]


  63. Seed Optimization Is No Easier than Optimal Golomb Ruler Design. [Citation Graph (, )][DBLP]


  64. Information shared by many objects. [Citation Graph (, )][DBLP]


  65. A Three-String Approach to the Closest String Problem. [Citation Graph (, )][DBLP]


  66. Why Greed Works for Shortest Common Superstring Problem. [Citation Graph (, )][DBLP]


  67. Unsupervised pronunciation grammar growing using knowledge-based and data-driven approaches. [Citation Graph (, )][DBLP]


  68. Acoustic segment modeling for speaker recognition. [Citation Graph (, )][DBLP]


  69. Voice conversion: From spoken vowels to singing vowels. [Citation Graph (, )][DBLP]


  70. Fuzzy rule selection using Iterative Rule Learning for speech data classification. [Citation Graph (, )][DBLP]


  71. Adaptive Image Hiding Algorithm Based on Classification. [Citation Graph (, )][DBLP]


  72. Protecting Biometric Templates Using Authentication Watermarking. [Citation Graph (, )][DBLP]


  73. More Efficient Algorithms for Closest String and Substring Problems. [Citation Graph (, )][DBLP]


  74. Specialized Review Selection for Feature Rating Estimation. [Citation Graph (, )][DBLP]


  75. Speaker Diarization Using Direction of Arrival Estimate and Acoustic Feature Information: The I2R-NTU Submission for the NIST RT 2007 Evaluation. [Citation Graph (, )][DBLP]


  76. The Normalized Similarity Metric and Its Applications. [Citation Graph (, )][DBLP]


  77. Amino Acid Classification and Hash Seeds for Homology Search. [Citation Graph (, )][DBLP]


  78. Discriminative learning for optimizing detection performance in spoken language recognition. [Citation Graph (, )][DBLP]


  79. Target-oriented phone tokenizers for spoken language recognition. [Citation Graph (, )][DBLP]


  80. The I4U system in NIST 2008 speaker recognition evaluation. [Citation Graph (, )][DBLP]


  81. Evaluation of a fused FM and cepstral-based speaker recognition system on the NIST 2008 SRE. [Citation Graph (, )][DBLP]


  82. Exploiting prosodic information for Speaker Recognition. [Citation Graph (, )][DBLP]


  83. Joint map adaptation of feature transformation and Gaussian Mixture Model for speaker recognition. [Citation Graph (, )][DBLP]


  84. Cross-validation of multiple language recognition systems using pseudo keys. [Citation Graph (, )][DBLP]


  85. A Lattice-Based Phonotactic Language Recognition System with CMLLR Adaptation and Its Implementation Issues. [Citation Graph (, )][DBLP]


  86. Analysis and Selection of Prosodic Features for Language Identification. [Citation Graph (, )][DBLP]


  87. On the Longest Common Rigid Subsequence Problem. [Citation Graph (, )][DBLP]


  88. ZOOM! Zillions of oligos mapped. [Citation Graph (, )][DBLP]


  89. Automated protein (re)sequencing with MS/MS and a homologous database yields almost full coverage and accuracy. [Citation Graph (, )][DBLP]


  90. Better score function for peptide identification with ETD MS/MS spectra. [Citation Graph (, )][DBLP]


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