The SCEAS System
Navigation Menu
Introduction
Collection Based
Clustering
Ranking
Paper Based
Journals
Conferences
DB Status
Statistics
Search

Search the dblp DataBase

Title:
Author:
Søren Brunak: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Claus Lundegaard, Morten Nielsen, Kasper Lamberth, Peder Worning, Christina Sylvester-Hvid, Søren Buus, Søren Brunak, Ole Lund
    MHC Class I Epitope Binding Prediction Trained on Small Data Sets. [Citation Graph (0, 0)][DBLP]
    ICARIS, 2004, pp:217-225 [Conf]
  2. Philip E. Bourne, Søren Brunak
    ISMB 2006. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2006, pp:1-2 [Conf]
  3. Søren Brunak, Anders Krogh
    ISMB 2001. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2001, pp:1-4 [Conf]
  4. Pierre Baldi, Søren Brunak, Yves Chauvin, Jacob Engelbrecht, Anders Krogh
    Periodic Sequence Patterns in Human Exons. [Citation Graph (0, 0)][DBLP]
    ISMB, 1995, pp:30-38 [Conf]
  5. Pierre Baldi, Søren Brunak, Yves Chauvin, Anders Gorm Pedersen
    Computational Applications of DNA Structural Scales. [Citation Graph (0, 0)][DBLP]
    ISMB, 1998, pp:35-42 [Conf]
  6. Pierre Baldi, Gianluca Pollastri, Claus A. F. Andersen, Søren Brunak
    Matching Protein b-Sheet Partners by Feedforward and Recurrent Neural Networks. [Citation Graph (0, 0)][DBLP]
    ISMB, 2000, pp:25-36 [Conf]
  7. Jan Gorodkin, Ole Lund, Claus A. F. Andersen, Søren Brunak
    Using Sequence Motifs for Enhanced Neural Network Prediction of Protein Distance Constraints. [Citation Graph (0, 0)][DBLP]
    ISMB, 1999, pp:95-105 [Conf]
  8. Anders Gorm Pedersen, Pierre Baldi, Søren Brunak, Yves Chauvin
    Characterization of Prokaryotic and Eukaryotic Promoters Using Hidden Markov Models. [Citation Graph (0, 0)][DBLP]
    ISMB, 1996, pp:182-191 [Conf]
  9. Claus Lundegaard, Thomas Nordahl Petersen, Morten Nielsen, Henrik Bohr, Jakob Bohr, Søren Brunak, Garry Gippert, Ole Lund
    Prediction of Protein Secondary Structure at High Accuracy Using a Combination of Many Neural Networks. [Citation Graph (0, 0)][DBLP]
    Mathematical Methods for Protein Structure Analysis and Design, 2003, pp:117-122 [Conf]
  10. Pierre Baldi, Søren Brunak, Yves Chauvin, Jacob Engelbrecht, Anders Krogh
    Hidden Markov Models for Human Genes. [Citation Graph (0, 0)][DBLP]
    NIPS, 1993, pp:761-768 [Conf]
  11. Henrik Fredholm, Henrik Bohr, Jakob Bohr, Søren Brunak, Rodney M. J. Cotterill, Benny Lautrup, Steffen B. Petersen
    A Novel Approach to Prediction of the 3-Dimensional Structures. [Citation Graph (0, 0)][DBLP]
    NIPS, 1990, pp:523-529 [Conf]
  12. Pierre Baldi, Søren Brunak
    Bioethics, Fiction Science, and the Future of Mankind - Session Introduction. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2001, pp:- [Conf]
  13. Ramneek Gupta, Søren Brunak
    Prediction of Glycosylation Across the Human Proteome and the Correlation to Protein Function. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2002, pp:310-322 [Conf]
  14. Pierre Baldi, Søren Brunak, Paolo Frasconi, Gianluca Pollastri, Giovanni Soda
    Bidirectional Dynamics for Protein Secondary Structure Prediction. [Citation Graph (0, 0)][DBLP]
    Sequence Learning, 2001, pp:80-104 [Conf]
  15. Claus A. F. Andersen, Søren Brunak
    Representation of Protein-Sequence Information by Amino Acid Subalphabets. [Citation Graph (0, 0)][DBLP]
    AI Magazine, 2004, v:25, n:1, pp:97-104 [Journal]
  16. Pierre-François Baisnée, Pierre Baldi, Søren Brunak, Anders Gorm Pedersen
    Flexibility of the genetic code with respect to DNA structure. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2001, v:17, n:3, pp:237-248 [Journal]
  17. Pierre Baldi, Søren Brunak, Yves Chauvin, Claus A. F. Andersen, Henrik Nielsen
    Assessing the accuracy of prediction algorithms for classification: an overview. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2000, v:16, n:5, pp:412-424 [Journal]
  18. Pierre Baldi, Søren Brunak, Yves Chauvin, Anders Gorm Pedersen
    Structural basis for triplet repeat disorders: a computational analysis. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1999, v:15, n:11, pp:918-929 [Journal]
  19. Pierre Baldi, Søren Brunak, Paolo Frasconi, Giovanni Soda, Gianluca Pollastri
    Exploiting the past and the future in protein secondary structure prediction. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1999, v:15, n:11, pp:937-946 [Journal]
  20. Jan Gorodkin, Laurie J. Heyer, Søren Brunak, Gary D. Stormo
    Displaying the information contents of structural RNA alignments: the structure logos. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1997, v:13, n:6, pp:583-586 [Journal]
  21. Jan Gorodkin, Hans Henrik Stærfeldt, Ole Lund, Søren Brunak
    MatrixPlot: visualizing sequence constraints. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1999, v:15, n:9, pp:769-770 [Journal]
  22. Svava Ósk Jónsdóttir, Flemming Steen Jørgensen, Søren Brunak
    Prediction methods and databases within chemoinformatics: emphasis on drugs and drug candidates. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:10, pp:2145-2160 [Journal]
  23. Lars Juhl Jensen, Ramneek Gupta, Hans Henrik Stærfeldt, Søren Brunak
    Prediction of human protein function according to Gene Ontology categories. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:5, pp:635-642 [Journal]
  24. Ulrik de Lichtenberg, Lars Juhl Jensen, Anders Fausbøll, Thomas S. Jensen, Peer Bork, Søren Brunak
    Comparison of computational methods for the identification of cell cycle-regulated genes. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:7, pp:1164-1171 [Journal]
  25. Morten Nielsen, Claus Lundegaard, Peder Worning, Christina Sylvester-Hvid, Kasper Lamberth, Søren Buus, Søren Brunak, Ole Lund
    Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:9, pp:1388-1397 [Journal]
  26. Jeppe S. Spicker, Friedrik Wikman, Ming-Lan Lu, Carlos Cordon-Cardo, Christopher T. Workman, Torben F. Ørntoft, Søren Brunak, Steen Knudsen
    Neural network predicts sequence of TP53 gene based on DNA chip. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2002, v:18, n:8, pp:1133-1134 [Journal]
  27. Jannick Dyrløv Bendtsen, Henrik Nielsen, David Widdick, Tracy Palmer, Søren Brunak
    Prediction of twin-arginine signal peptides. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2005, v:6, n:, pp:167- [Journal]
  28. Lars Kiemer, Ole Lund, Søren Brunak, Nikolaj Blom
    Coronavirus 3CLpro proteinase cleavage sites: Possible relevance to SARS virus pathology. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:72- [Journal]
  29. Jan Gorodkin, Bodil Søgaard, Hanne Bay, Hans Doll, Per Kølster, Søren Brunak
    Recognition of Environmental and Genetic Effects on Barley Phenolic Fingerprints by Neural Networks. [Citation Graph (0, 0)][DBLP]
    Computers & Chemistry, 2001, v:25, n:3, pp:301-307 [Journal]
  30. Anders Gorm Pedersen, Pierre Baldi, Yves Chauvin, Søren Brunak
    The Biology of Eukaryotic Promoter Prediction - A Review. [Citation Graph (0, 0)][DBLP]
    Computers & Chemistry, 1999, v:23, n:3-4, pp:191-207 [Journal]
  31. David Ussery, Dikeos Mario Soumpasis, Søren Brunak, Hans Henrik Stærfeldt, Peder Worning, Anders Krogh
    Bias of Purine Stretches in Sequenced Chromosomes. [Citation Graph (0, 0)][DBLP]
    Computers & Chemistry, 2002, v:26, n:5, pp:531-541 [Journal]
  32. Henrik Nielsen, Jacob Engelbrecht, Søren Brunak, Gunnar von Heijne
    A Neural Network Method for Identification of Prokaryotic and Eukaryotic Signal Peptides and Prediction of their Cleavage Sites. [Citation Graph (0, 0)][DBLP]
    Int. J. Neural Syst., 1997, v:8, n:5-6, pp:581-599 [Journal]
  33. Thomas M. Frimurer, Robert Bywater, Lars Nærum, Leif Nørskov Lauritsen, Søren Brunak
    Improving the Odds in Discriminating "Drug-like" from "Non Drug-like" Compounds. [Citation Graph (0, 0)][DBLP]
    Journal of Chemical Information and Computer Sciences, 2000, v:40, n:6, pp:1315-1324 [Journal]
  34. Nikolaj Blom, Andres Kreegipuu, Søren Brunak
    PhosphoBase: a database of phosphorylation sites. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1998, v:26, n:1, pp:382-386 [Journal]
  35. Tanja la Cour, Ramneek Gupta, Kristoffer Rapacki, Karen Skriver, Flemming M. Poulsen, Søren Brunak
    NESbase version 1.0: a database of nuclear export signals. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:1, pp:393-396 [Journal]
  36. Jan E. Hansen, Ole Lund, Jens O. Nielsen, John-E. S. Hansen, Søren Brunak
    O-GLYCBASE: a revised database of O-glycosylated proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1996, v:24, n:1, pp:248-252 [Journal]
  37. Jan E. Hansen, Ole Lund, Jette Nilsson, Kristoffer Rapacki, Søren Brunak
    O-GLYCBASE Version 3.0: a revised database of O-glycosylated proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1998, v:26, n:1, pp:387-389 [Journal]
  38. Jan E. Hansen, Ole Lund, Kristoffer Rapacki, Søren Brunak
    O-GLYCBASE version 2.0: a revised database of O-glycosylated proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1997, v:25, n:1, pp:278-282 [Journal]
  39. Ramneek Gupta, Hanne Birch, Kristoffer Rapacki, Søren Brunak, Jan E. Hansen
    O-GLYCBASE version 4.0: a revised database of O-glycosylated proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1999, v:27, n:1, pp:370-372 [Journal]
  40. Andres Kreegipuu, Nikolaj Blom, Søren Brunak
    PhosphoBase, a database of phosphorylation sites: release 2.0. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1999, v:27, n:1, pp:237-239 [Journal]
  41. Jens Kaae Christensen, Kasper Lamberth, Morten Nielsen, Claus Lundegaard, Peder Worning, Sanne Lise Lauemøller, Søren Buus, Søren Brunak, Ole Lund
    Selecting Informative Data for Developing Peptide-MHC Binding Predictors Using a Query by Committee Approach. [Citation Graph (0, 0)][DBLP]
    Neural Computation, 2003, v:15, n:12, pp:2931-2942 [Journal]

  42. SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation. [Citation Graph (, )][DBLP]


  43. ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization. [Citation Graph (, )][DBLP]


  44. Modeling the adaptive immune system: predictions and simulations. [Citation Graph (, )][DBLP]


Search in 0.022secs, Finished in 0.024secs
NOTICE1
System may not be available sometimes or not working properly, since it is still in development with continuous upgrades
NOTICE2
The rankings that are presented on this page should NOT be considered as formal since the citation info is incomplete in DBLP
 
Introduction Collection Based Clustering Ranking Paper Based Journals Conferences DB Status Statistics Search
System created by asidirop@csd.auth.gr [http://users.auth.gr/~asidirop/] © 2002
for Data Engineering Laboratory, Department of Informatics, Aristotle University © 2002