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David Sankoff: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. David Sankoff
    The Production of Code-Mixed Discourse. [Citation Graph (0, 0)][DBLP]
    COLING-ACL, 1998, pp:8-21 [Conf]
  2. David Sankoff, Lusheng Wang, Francis Chin
    Preface. [Citation Graph (0, 0)][DBLP]
    APBC, 2007, pp:- [Conf]
  3. David Sankoff, Mathieu Blanchette
    The Median Problem for Breakpoints in Comparative Genomics. [Citation Graph (0, 0)][DBLP]
    COCOON, 1997, pp:251-264 [Conf]
  4. Chunfang Zheng, David Sankoff
    Genome Rearrangements with Partially Ordered Chromosomes. [Citation Graph (0, 0)][DBLP]
    COCOON, 2005, pp:52-62 [Conf]
  5. Nadia El-Mabrouk, David Sankoff
    Hybridization and Genome Rearrangement. [Citation Graph (0, 0)][DBLP]
    CPM, 1999, pp:78-87 [Conf]
  6. Vincent Ferretti, Joseph H. Nadeau, David Sankoff
    Original Synteny. [Citation Graph (0, 0)][DBLP]
    CPM, 1996, pp:159-167 [Conf]
  7. Nadia El-Mabrouk, Joseph H. Nadeau, David Sankoff
    Genome Halving. [Citation Graph (0, 0)][DBLP]
    CPM, 1998, pp:235-250 [Conf]
  8. John D. Kececioglu, David Sankoff
    Exact and Approximation Algorithms for the Inversion Distance Between Two Chromosomes. [Citation Graph (0, 0)][DBLP]
    CPM, 1993, pp:87-105 [Conf]
  9. John D. Kececioglu, David Sankoff
    Efficient Bounds for Oriented Chromosome Inversion Distance. [Citation Graph (0, 0)][DBLP]
    CPM, 1994, pp:307-325 [Conf]
  10. David Sankoff
    Edit Distances for Genome Comparisons Based on Non-Local Operations. [Citation Graph (0, 0)][DBLP]
    CPM, 1992, pp:121-135 [Conf]
  11. David Sankoff, Marie-Noelle Parent, Isabelle Marchand, Vincent Ferretti
    On the Nadeau-Taylor Theory of Conserved Chromosome Segments. [Citation Graph (0, 0)][DBLP]
    CPM, 1997, pp:262-274 [Conf]
  12. Chunfang Zheng, David Sankoff
    Rearrangement of Noisy Genomes. [Citation Graph (0, 0)][DBLP]
    International Conference on Computational Science (2), 2006, pp:791-798 [Conf]
  13. Jean-François Lefebvre, Nadia El-Mabrouk, Elisabeth R. M. Tillier, David Sankoff
    Detection and validation of single gene inversions. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2003, pp:190-196 [Conf]
  14. Phil Trinh, Aoife McLysaght, David Sankoff
    Genomic features in the breakpoint regions between syntenic blocks. [Citation Graph (0, 0)][DBLP]
    ISMB/ECCB (Supplement of Bioinformatics), 2004, pp:318-325 [Conf]
  15. Chunfang Zheng, Aleksander Lenert, David Sankoff
    Reversal distance for partially ordered genomes. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2005, pp:502-508 [Conf]
  16. Zaky Adam, Monique Turmel, Claude Lemieux, David Sankoff
    Common Intervals and Symmetric Difference in a Model-Free Phylogenomics, with an Application to Streptophyte Evolution. [Citation Graph (0, 0)][DBLP]
    Comparative Genomics, 2006, pp:63-74 [Conf]
  17. Rose Hoberman, David Sankoff, Dannie Durand
    The Statistical Significance of Max-Gap Clusters. [Citation Graph (0, 0)][DBLP]
    Comparative Genomics, 2004, pp:55-71 [Conf]
  18. Dannie Durand, David Sankoff
    Tests for gene clustering. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2002, pp:144-154 [Conf]
  19. Nadia El-Mabrouk, David Bryant, David Sankoff
    Reconstructing the pre-doubling genome. [Citation Graph (0, 0)][DBLP]
    RECOMB, 1999, pp:154-163 [Conf]
  20. David Sankoff
    Statistical Evaluation of Genome Rearrangement. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2006, pp:84-84 [Conf]
  21. David Sankoff, Mathieu Blanchette
    Multiple genome rearrangements. [Citation Graph (0, 0)][DBLP]
    RECOMB, 1998, pp:243-247 [Conf]
  22. David Sankoff, Mathieu Blanchette
    Probability models for genome rearrangement and linear invariants for phylogenetic inference. [Citation Graph (0, 0)][DBLP]
    RECOMB, 1999, pp:302-309 [Conf]
  23. David Sankoff, David Bryant, Mélanie Deneault, B. Franz Lang, Gertraud Burger
    Early eukaryote evolution based on mitochondrial gene order breakpoints. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2000, pp:254-262 [Conf]
  24. David Sankoff, Vincent Ferretti, Joseph H. Nadeau
    Conserved segment identification. [Citation Graph (0, 0)][DBLP]
    RECOMB, 1997, pp:252-256 [Conf]
  25. David Sankoff, Lani Haque
    Power Boosts for Cluster Tests. [Citation Graph (0, 0)][DBLP]
    Comparative Genomics, 2005, pp:121-130 [Conf]
  26. David Sankoff, Jean-François Lefebvre, Elisabeth R. M. Tillier, Adrian Maler, Nadia El-Mabrouk
    The Distribution of Inversion Lengths in Bacteria. [Citation Graph (0, 0)][DBLP]
    Comparative Genomics, 2004, pp:97-108 [Conf]
  27. David Sankoff, Matthew Mazowita
    Estimators of Translocations and Inversions in Comparative Maps. [Citation Graph (0, 0)][DBLP]
    Comparative Genomics, 2004, pp:109-122 [Conf]
  28. David Sankoff, Matthew Mazowita
    Stability of Rearrangement Measures in the Comparison of Genome Sequences. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2005, pp:603-614 [Conf]
  29. David Sankoff, Phil Trinh
    Chromosomal breakpoint re-use in the inference of genome sequence rearrangement. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2004, pp:30-35 [Conf]
  30. David Sankoff, Chunfang Zheng, Aleksander Lenert
    Reversals of Fortune. [Citation Graph (0, 0)][DBLP]
    Comparative Genomics, 2005, pp:131-141 [Conf]
  31. Wei Xu, Chunfang Zheng, David Sankoff
    Paths and Cycles in Breakpoint Graphs of Random Multichromosomal Genomes. [Citation Graph (0, 0)][DBLP]
    Comparative Genomics, 2006, pp:51-62 [Conf]
  32. David Sankoff
    Short inversions and conserved gene clusters. [Citation Graph (0, 0)][DBLP]
    SAC, 2002, pp:164-167 [Conf]
  33. Won-Sook Lee, Pierre Beylot, David Sankoff, Nadia Magnenat-Thalmann
    Generating 3D Virtual Populations from Pictures of a Few Individuals. [Citation Graph (0, 0)][DBLP]
    WADS, 1999, pp:134-144 [Conf]
  34. John D. Kececioglu, David Sankoff
    Exact and Approximation Algorithms for Sorting by Reversals, with Application to Genome Rearrangement. [Citation Graph (0, 0)][DBLP]
    Algorithmica, 1995, v:13, n:1/2, pp:180-210 [Journal]
  35. David Sankoff
    Genome rearrangement with gene families. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1999, v:15, n:11, pp:909-917 [Journal]
  36. David Sankoff
    The early introduction of dynamic programming into computational biology. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2000, v:16, n:1, pp:41-47 [Journal]
  37. David Sankoff
    Short inversions and conserved gene cluster. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2002, v:18, n:10, pp:1305- [Journal]
  38. David Sankoff, Joseph H. Nadeau
    Conserved Synteny As a Measure of Genomic Distance. [Citation Graph (0, 0)][DBLP]
    Discrete Applied Mathematics, 1996, v:71, n:1-3, pp:247-257 [Journal]
  39. David Sankoff
    Dictionary Structure and Probability Measures [Citation Graph (0, 0)][DBLP]
    Information and Control, 1971, v:19, n:2, pp:104-113 [Journal]
  40. David Sankoff, Gopal Sundaram, John D. Kececioglu
    Steiner Points in the Space of Genome Rearrangements. [Citation Graph (0, 0)][DBLP]
    Int. J. Found. Comput. Sci., 1996, v:7, n:1, pp:1-9 [Journal]
  41. Guillaume Bourque, David Sankoff
    Improving Gene Network Inference by Comparing Expression Time-series across Species, Developmental Stages or Tissues. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2004, v:2, n:4, pp:765-784 [Journal]
  42. Dannie Durand, David Sankoff
    Tests for Gene Clustering. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2003, v:10, n:3/4, pp:453-482 [Journal]
  43. David Sankoff, Mathieu Blanchette
    Multiple Genome Rearrangement and Breakpoint Phylogeny. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1998, v:5, n:3, pp:555-570 [Journal]
  44. David Sankoff, Mathieu Blanchette
    Phylogenetic Invariants for Genome Rearrangements. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1999, v:6, n:3/4, pp:- [Journal]
  45. David Sankoff, David Bryant, Mélanie Deneault, B. Franz Lang, Gertraud Burger
    Early Eukaryote Evolution Based on Mitochondrial Gene Order Breakpoints. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2000, v:7, n:3-4, pp:521-535 [Journal]
  46. David Sankoff, Vincent Ferretti, Joseph H. Nadeau
    Conserved Segment Identification. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1997, v:4, n:4, pp:559-0 [Journal]
  47. David Sankoff, Phil Trinh
    Chromosomal Breakpoint Reuse in Genome Sequence Rearrangement. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2005, v:12, n:6, pp:812-821 [Journal]
  48. Chunfang Zheng, David Sankoff
    Genome rearrangements with partially ordered chromosomes. [Citation Graph (0, 0)][DBLP]
    J. Comb. Optim., 2006, v:11, n:2, pp:133-144 [Journal]
  49. Raffaele Giancarlo, David Sankoff
    Editorial: Combinatiorial Pattern Matching. [Citation Graph (0, 0)][DBLP]
    J. Discrete Algorithms, 2004, v:2, n:2, pp:135-136 [Journal]
  50. David Sankoff, R. J. Cedergren, W. McKay
    A strategy for sequence phylogeny research. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1982, v:10, n:1, pp:421-431 [Journal]
  51. Nadia El-Mabrouk, David Sankoff
    The Reconstruction of Doubled Genomes. [Citation Graph (0, 0)][DBLP]
    SIAM J. Comput., 2003, v:32, n:3, pp:754-792 [Journal]
  52. Chunfang Zheng, Qian Zhu, David Sankoff
    Parts of the Problem of Polyploids in Rearrangement Phylogeny. [Citation Graph (0, 0)][DBLP]
    RECOMB-CG, 2007, pp:162-176 [Conf]
  53. Vicky Choi, Chunfang Zheng, Qian Zhu, David Sankoff
    Algorithms for the Extraction of Synteny Blocks from Comparative Maps. [Citation Graph (0, 0)][DBLP]
    WABI, 2007, pp:277-288 [Conf]

  54. Genome Halving with Double Cut and Join. [Citation Graph (, )][DBLP]


  55. Poisson adjacency distributions in genome comparison: multichromosomal, circular, signed and unsigned cases. [Citation Graph (, )][DBLP]


  56. Polyploids, genome halving and phylogeny. [Citation Graph (, )][DBLP]


  57. Guided genome halving: hardness, heuristics and the history of the Hemiascomycetes. [Citation Graph (, )][DBLP]


  58. Internal Validation of Ancestral Gene Order Reconstruction in Angiosperm Phylogeny. [Citation Graph (, )][DBLP]


  59. Natural Parameter Values for Generalized Gene Adjacency. [Citation Graph (, )][DBLP]


  60. A Statistically Fair Comparison of Ancestral Genome Reconstructions, Based on Breakpoint and Rearrangement Distances. [Citation Graph (, )][DBLP]


  61. Decompositions of Multiple Breakpoint Graphs and Rapid Exact Solutions to the Median Problem. [Citation Graph (, )][DBLP]


  62. Multichromosomal Genome Median and Halving Problems. [Citation Graph (, )][DBLP]


  63. Listing All Sorting Reversals in Quadratic Time. [Citation Graph (, )][DBLP]


  64. Tests for Gene Clusters Satisfying the Generalized Adjacency Criterion. [Citation Graph (, )][DBLP]


  65. A Customized Class of Functions for Modeling and Clustering Gene Expression Profiles in Embryonic Stem Cells. [Citation Graph (, )][DBLP]


  66. Hierarchical Clustering Using Constraints. [Citation Graph (, )][DBLP]


  67. Generalized Gene Adjacencies, Graph Bandwidth and Clusters in Yeast Evolution. [Citation Graph (, )][DBLP]


  68. Rearrangement Phylogeny of Genomes in Contig Form. [Citation Graph (, )][DBLP]


  69. Multichromosomal median and halving problems under different genomic distances. [Citation Graph (, )][DBLP]


  70. Genome aliquoting with double cut and join. [Citation Graph (, )][DBLP]


  71. Scaffold filling, contig fusion and comparative gene order inference. [Citation Graph (, )][DBLP]


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