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Publications of Author

1. Shi-Hua Zhang, Hong-Wei Liu, Xue-Mei Ning, Xiang-Sun Zhang
   A Graph-Theoretic Method for Mining Functional Modules in Large Sparse Protein Interaction Networks. [Citation Graph (0, 0)][DBLP]
   ICDM Workshops, 2006, pp:130-135 [Conf]
   
2. Yong Wang, Trupti Joshi, Dong Xu, Xiang-Sun Zhang, Luonan Chen
   Supervised Inference of Gene Regulatory Networks by Linear Programming. [Citation Graph (0, 0)][DBLP]
   ICIC (3), 2006, pp:551-561 [Conf]
   
3. Shi-Hua Zhang, Xue-Mei Ning, Hong-Wei Liu, Xiang-Sun Zhang
   Prediction of Protein Complexes Based on Protein Interaction Data and Functional Annotation Data Using Kernel Methods. [Citation Graph (0, 0)][DBLP]
   ICIC (3), 2006, pp:514-524 [Conf]
   
4. Xiang-Sun Zhang, Hui-Can Zhu
   A Neural Network Model for Quadratic Programming with Simple Upper and Lower Bounds and its Application to Linear Programming. [Citation Graph (0, 0)][DBLP]
   ISAAC, 1994, pp:119-127 [Conf]
   
5. Yong Wang, Ling-Yun Wu, Xiang-Sun Zhang, Luonan Chen
   Automatic Classification of Protein Structures Based on Convex Hull Representation by Integrated Neural Network. [Citation Graph (0, 0)][DBLP]
   TAMC, 2006, pp:505-514 [Conf]
   
6. Zhen-Ping Li, Wenfeng Zhou, Xiang-Sun Zhang, Luonan Chen
   A parsimonious tree-grow method for haplotype inference. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:17, pp:3475-3481 [Journal]
   
7. Rui-Sheng Wang, Ling-Yun Wu, Zhen-Ping Li, Xiang-Sun Zhang
   Haplotype reconstruction from SNP fragments by minimum error correction. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:10, pp:2456-2462 [Journal]
   
8. Ji-hong Zhang, Ling-Yun Wu, Xiang-Sun Zhang
   Reconstruction of DNA sequencing by hybridization. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2003, v:19, n:1, pp:14-21 [Journal]
   
9. Yong Wang, Trupti Joshi, Xiang-Sun Zhang, Dong Xu, Luonan Chen
   Inferring gene regulatory networks from multiple microarray datasets. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:19, pp:2413-2420 [Journal]
   
10. Yu-Ying Zhao, Ling-Yun Wu, Ji-hong Zhang, Rui-Sheng Wang, Xiang-Sun Zhang
    Haplotype assembly from aligned weighted SNP fragments. [Citation Graph (0, 0)][DBLP]
    Computational Biology and Chemistry, 2005, v:29, n:4, pp:281-287 [Journal]
    
11. Shi-Hua Zhang, Xue-Mei Ning, Xiang-Sun Zhang
    Identification of functional modules in a PPI network by clique percolation clustering. [Citation Graph (0, 0)][DBLP]
    Computational Biology and Chemistry, 2006, v:30, n:6, pp:445-451 [Journal]
    
12. Ling-Yun Wu, Xiang-Sun Zhang, Ju-Liang Zhang
    Capacitated facility location problem with general setup cost. [Citation Graph (0, 0)][DBLP]
    Computers & OR, 2006, v:33, n:, pp:1226-1241 [Journal]
    
13. Xiang-Sun Zhang, Yong Wang, Zhong-Wei Zhan, Ling-Yun Wu, Luonan Chen
    Exploring Protein's Optimal Hp Configurations by Self-organizing Mapping. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2005, v:3, n:2, pp:385-400 [Journal]
    
14. Xiang-Sun Zhang, De-Gang Liu
    A Note on the Continuity of Solutions of Parametric Linear Programs. [Citation Graph (0, 0)][DBLP]
    Math. Program., 1990, v:47, n:, pp:143-153 [Journal]
    
15. Ji-hong Zhang, Ling-Yun Wu, Yu-Ying Zhao, Xiang-Sun Zhang
    An optimization approach to the reconstruction of positional DNA sequencing by hybridization with errors. [Citation Graph (0, 0)][DBLP]
    European Journal of Operational Research, 2007, v:182, n:1, pp:413-427 [Journal]
    
16. Rui-Sheng Wang, Shi-Hua Zhang, Xiang-Sun Zhang, Luonan Chen
    Identifying Modules in Complex Networks by a Graph-Theoretical Method and Its Application in Protein Interaction Networks. [Citation Graph (0, 0)][DBLP]
    ICIC (2), 2007, pp:1090-1101 [Conf]
    
17. 
    Inferring gene regulatory networks from expression data with prior knowledge by linear programming. [Citation Graph (, )][DBLP]
    
    
18. 
    Detecting Community Structure in Complex Networks by Optimal Rearrangement Clustering. [Citation Graph (, )][DBLP]
    
    
19. 
    Dynamically dysfunctional protein interactions in the development of Alzheimer's disease. [Citation Graph (, )][DBLP]
    
    
20. 
    Reconstruction of Regulator Activity in E. coli Post-Transcription Processes. [Citation Graph (, )][DBLP]
    
    
21. 
    Inferring transcriptional regulatory networks from high-throughput data. [Citation Graph (, )][DBLP]
    
    
22. 
    Alignment of molecular networks by integer quadratic programming. [Citation Graph (, )][DBLP]
    
    
23. 
    Prediction of protein-RNA binding sites by a random forest method with combined features. [Citation Graph (, )][DBLP]
    
    
24. 
    Analysis on multi-domain cooperation for predicting protein-protein interactions. [Citation Graph (, )][DBLP]
    
    
25. 
    Predicting gene ontology functions from protein's regional surface structures. [Citation Graph (, )][DBLP]
    
    
26. 
    Modeling post-transcriptional regulation activity of small non-coding RNAs in Escherichia coli. [Citation Graph (, )][DBLP]
    
    
27. 
    Detecting disease associated modules and prioritizing active genes based on high throughput data. [Citation Graph (, )][DBLP]