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Stavros J. Hamodrakas: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Pantelis G. Bagos, Theodore Liakopoulos, Stavros J. Hamodrakas
    Faster Gradient Descent Training of Hidden Markov Models, Using Individual Learning Rate Adaptation. [Citation Graph (0, 0)][DBLP]
    ICGI, 2004, pp:40-52 [Conf]
  2. Ioannis Iliopoulos, Sophia Tsoka, Miguel A. Andrade, Anton J. Enright, Mark Carroll, Patrick Poullet, Vassilis J. Promponas, Theodore Liakopoulos, Giorgos Palaios, Claude Pasquier, Stavros J. Hamodrakas, Javier Tamames, Asutosh T. Yagnik, Anna Tramontano, Damien Devos, Christian Blaschke, Alfonso Valencia, David Brett, David Martin, Christophe Leroy, Isidore Rigoutsos, Chris Sander, Christos A. Ouzounis
    Evaluation of annotation strategies using an entire genome sequence. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:6, pp:717-726 [Journal]
  3. Stavros J. Hamodrakas
    A protein secondary structure prediction scheme for the IBM PC and compatibles. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1988, v:4, n:4, pp:473-477 [Journal]
  4. C. M. Pasquier, Vassilis J. Promponas, N. J. Varvayannis, Stavros J. Hamodrakas
    A web server to locate periodicities in a sequence. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1998, v:14, n:8, pp:749-750 [Journal]
  5. A. Perrakis, C. Constantinides, A. Athanasiades, Stavros J. Hamodrakas
    PBM: a software package to create, display and manipulate interactively models of small molecules and proteins on IBM-compatible PCs. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1995, v:11, n:2, pp:141-145 [Journal]
  6. Vassilis J. Promponas, Anton J. Enright, Sophia Tsoka, David P. Kreil, Christophe Leroy, Stavros J. Hamodrakas, Chris Sander, Christos A. Ouzounis
    CAST: an iterative algorithm for the complexity analysis of sequence tracts. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2000, v:16, n:10, pp:915-922 [Journal]
  7. Nikolaos G. Sgourakis, Pantelis G. Bagos, Stavros J. Hamodrakas
    Prediction of the coupling specificity of GPCRs to four families of G-proteins using hidden Markov models and artificial neural networks. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:22, pp:4101-4106 [Journal]
  8. Ioannis C. Spyropoulos, Theodore Liakopoulos, Pantelis G. Bagos, Stavros J. Hamodrakas
    TMRPres2D: high quality visual representation of transmembrane protein models. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:17, pp:3258-3260 [Journal]
  9. Pantelis G. Bagos, Theodore Liakopoulos, Stavros J. Hamodrakas
    Evaluation of methods for predicting the topology of beta-barrel outer membrane proteins and a consensus prediction method. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2005, v:6, n:, pp:7- [Journal]
  10. Pantelis G. Bagos, Theodore D. Liakopoulos, Stavros J. Hamodrakas
    Algorithms for incorporating prior topological information in HMMs: application to transmembrane proteins. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2006, v:7, n:, pp:189- [Journal]
  11. Pantelis G. Bagos, Theodore Liakopoulos, Ioannis C. Spyropoulos, Stavros J. Hamodrakas
    A Hidden Markov Model method, capable of predicting and discriminating beta-barrel outer membrane proteins. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:29- [Journal]
  12. Antigoni L. Elefsinioti, Pantelis G. Bagos, Ioannis C. Spyropoulos, Stavros J. Hamodrakas
    A database for G proteins and their interaction with GPCRs. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:208- [Journal]
  13. Christiana K. Magkrioti, Ioannis C. Spyropoulos, Vassiliki A. Iconomidou, Judith H. Willis, Stavros J. Hamodrakas
    cuticleDB: a relational database of Arthropod cuticular proteins. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:138- [Journal]
  14. Nikolaos G. Sgourakis, Pantelis G. Bagos, Panagiotis K. Papasaikas, Stavros J. Hamodrakas
    A method for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2005, v:6, n:, pp:104- [Journal]
  15. Georgios S. Vernikos, Christos G. Gkogkas, Vassilis J. Promponas, Stavros J. Hamodrakas
    GeneViTo: Visualizing gene-product functional and structural features in genomic datasets. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2003, v:4, n:, pp:53- [Journal]
  16. Evanthia E. Pashou, Zoi I. Litou, Theodore Liakopoulos, Stavros J. Hamodrakas
    waveTM: Wavelet-based transmembrane segment prediction. [Citation Graph (0, 0)][DBLP]
    In Silico Biology, 2004, v:4, n:, pp:- [Journal]
  17. Vassilis J. Promponas, G. A. Palaios, C. M. Pasquier, J. S. Hamodrakas, Stavros J. Hamodrakas
    CoPreTHi: A Web tool which combines transmembrane protein segment prediction methods. [Citation Graph (0, 0)][DBLP]
    In Silico Biology, 1998, v:1, n:, pp:14- [Journal]
  18. Pantelis G. Bagos, Theodore Liakopoulos, Ioannis C. Spyropoulos, Stavros J. Hamodrakas
    PRED-TMBB: a web server for predicting the topology of ?barrel outer membrane proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:400-404 [Journal]
  19. Panagiotis K. Papasaikas, Pantelis G. Bagos, Zoi I. Litou, Vassilis J. Promponas, Stavros J. Hamodrakas
    PRED-GPCR: GPCR recognition and family classification server. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:380-382 [Journal]

  20. gpDB: a database of GPCRs, G-proteins, effectors and their interactions. [Citation Graph (, )][DBLP]


  21. N-terminal sequence-based prediction of subcellular location. [Citation Graph (, )][DBLP]


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