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Publications of Author

1. Yanfeng Zheng, Simin He, Shutao Sun, Wen Gao
   Scheduling Algorithms for Input Queued Switches Using Local Search Technique. [Citation Graph (0, 0)][DBLP]
   ICN (1), 2005, pp:865-872 [Conf]
   
2. Kui Gao, Wen Gao, Simin He, Peng Gao, Yuan Zhang
   Real-time scheduling on scalable media stream delivery. [Citation Graph (0, 0)][DBLP]
   ISCAS (2), 2003, pp:824-827 [Conf]
   
3. Yan Fu, Qiang Yang, Charles X. Ling, Haipeng Wang, Dequan Li, Ruixiang Sun, Hu Zhou, Rong Zeng, Yiqiang Chen, Simin He, Wen Gao
   A Kernel-Based Case Retrieval Algorithm with Application to Bioinformatics. [Citation Graph (0, 0)][DBLP]
   PRICAI, 2004, pp:544-553 [Conf]
   
4. Haipeng Wang, Yan Fu, Ruixiang Sun, Simin He, Rong Zeng, Wen Gao
   An SVM Scorer for More Sensitive and Reliable Peptide Identification via Tandem Mass Spectrometry. [Citation Graph (0, 0)][DBLP]
   Pacific Symposium on Biocomputing, 2006, pp:303-314 [Conf]
   
5. Simin He, Shutao Sun, Wei Zhao, Yanfeng Zheng, Wen Gao
   Smooth switching problem in buffered crossbar switches. [Citation Graph (0, 0)][DBLP]
   SIGMETRICS, 2005, pp:386-387 [Conf]
   
6. Kui Gao, Wen Gao, Simin He, Yuan Zhang
   Real-time scheduling and online resource allocation on scalable streaming media server. [Citation Graph (0, 0)][DBLP]
   VCIP, 2003, pp:544-551 [Conf]
   
7. Dequan Li, Yan Fu, Ruixiang Sun, Charles X. Ling, Yonggang Wei, Hu Zhou, Rong Zeng, Qiang Yang, Simin He, Wen Gao
   pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:13, pp:3049-3050 [Journal]
   
8. Dequan Li, Wen Gao, Charles X. Ling, Xiaobiao Wang, Ruixiang Sun, Simin He
   IndexToolkit: an open source toolbox to index protein databases for high-throughput proteomics. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:20, pp:2572-2573 [Journal]
   
9. Kui Gao, Wen Gao, Simin He, Yuan Zhang
   Real-time scheduling based on imprecise computation for scalable streaming media system over the Internet. [Citation Graph (0, 0)][DBLP]
   Real-Time Imaging, 2004, v:10, n:5, pp:307-313 [Journal]
   
10. Yan Fu, Ruixiang Sun, Qiang Yang, Simin He, Chunli Wang, Haipeng Wang, Shiguang Shan, Junfa Liu, Wen Gao
    A block-based support vector machine approach to the protein homology prediction task in KDD Cup 2004. [Citation Graph (0, 0)][DBLP]
    SIGKDD Explorations, 2004, v:6, n:2, pp:120-124 [Journal]
    
11. Jingfen Zhang, Wen Gao, Jinjin Cai, Simin He, Rong Zeng, Runsheng Chen
    Predicting Molecular Formulas of Fragment Ions with Isotope Patterns in Tandem Mass Spectra. [Citation Graph (0, 0)][DBLP]
    IEEE/ACM Trans. Comput. Biology Bioinform., 2005, v:2, n:3, pp:217-230 [Journal]
    
12. Kui Gao, Wen Gao, Simin He, Yuan Zhang
    Real-time smoothing for network adaptive video streaming. [Citation Graph (0, 0)][DBLP]
    J. Visual Communication and Image Representation, 2005, v:16, n:4-5, pp:512-526 [Journal]
    
13. Yanfeng Zheng, Simin He, Shutao Sun, Wen Gao
    Parallelized scheduling algorithm for input queued switches using local search technique. [Citation Graph (0, 0)][DBLP]
    IPCCC, 2005, pp:43-48 [Conf]
    
14. 
    A Flexible Stem-Based Local Search Algorithm for Predicting RNA Secondary Structures Including Pseudoknots. [Citation Graph (, )][DBLP]
    
    
15. 
    Mining Tandem Mass Spectral Data to Develop a More Accurate Mass Error Model for Peptide Identification. [Citation Graph (, )][DBLP]
    
    
16. 
    Practical Algorithms of Bandwidth Regulation for Rate-Based Switching. [Citation Graph (, )][DBLP]
    
    
17. 
    FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space. [Citation Graph (, )][DBLP]
    
    
18. 
    Open MS/MS spectral library search to identify unanticipated post-translational modifications and increase spectral identification rate. [Citation Graph (, )][DBLP]
    
    
19. 
    Efficient discovery of abundant post-translational modifications and spectral pairs using peptide mass and retention time differences. [Citation Graph (, )][DBLP]