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Shoba Ranganathan: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Durgaprasad Bollina, Bernett T. K. Lee, Shoba Ranganathan
    MVC Architecture in Bioinformatics web applications and its Java implementation. [Citation Graph (0, 0)][DBLP]
    iiWAS, 2005, pp:759-764 [Conf]
  2. Lesheng Kong, Shoba Ranganathan
    Delineation of modular proteins: Domain boundary prediction from sequence information. [Citation Graph (0, 0)][DBLP]
    Briefings in Bioinformatics, 2004, v:5, n:2, pp:179-192 [Journal]
  3. Shivashankar H. Nagaraj, Robin B. Gasser, Shoba Ranganathan
    A hitchhiker's guide to expressed sequence tag (EST) analysis. [Citation Graph (0, 0)][DBLP]
    Briefings in Bioinformatics, 2007, v:8, n:1, pp:6-21 [Journal]
  4. Joo Chuan Tong, Tin Wee Tan, Shoba Ranganathan
    Methods and protocols for prediction of immunogenic epitopes. [Citation Graph (0, 0)][DBLP]
    Briefings in Bioinformatics, 2007, v:8, n:2, pp:96-108 [Journal]
  5. Kunde Ramamoorthy Govindarajan, Pandjassarame Kangueane, Tin Wee Tan, Shoba Ranganathan
    MPID: MHC-Peptide Interaction Database for sequence-structure-function information on peptides binding to MHC molecules. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:2, pp:309-310 [Journal]
  6. Joo Chuan Tong, Guanglan Zhang, Tin Wee Tan, J. Thomas August, Vladimir Brusic, Shoba Ranganathan
    Prediction of HLA-DQ3.2ß Ligands: evidence of multiple registers in class II binding peptides. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:10, pp:1232-1238 [Journal]
  7. Vivek Gopalan, Tin Wee Tan, Shoba Ranganathan
    XdomView: protein domain and exon position visualization. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:1, pp:159-160 [Journal]
  8. Joo Chuan Tong, Tin Wee Tan, Shoba Ranganathan
    In silico grouping of peptide/HLA class I complexes using structural interaction characteristics. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:2, pp:177-183 [Journal]
  9. Khar Heng Choo, Tin Wee Tan, Shoba Ranganathan
    SPdb - a signal peptide database. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2005, v:6, n:, pp:249- [Journal]
  10. Bernett T. K. Lee, Tin Wee Tan, Shoba Ranganathan
    DEDB: a database of Drosophila melanogaster exons in splicing graph form. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:189- [Journal]
  11. Russ B. Altman, Alfonso Valencia, Satoru Miyano, Shoba Ranganathan
    Challenges for Intelligent Systems in Biology. [Citation Graph (0, 0)][DBLP]
    IEEE Intelligent Systems, 2001, v:16, n:6, pp:14-20 [Journal]
  12. Vivek Gopalan, Tin Wee Tan, Bernett T. K. Lee, Shoba Ranganathan
    Xpro: database of eukaryotic protein-encoding genes. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Database-Issue, pp:59-63 [Journal]
  13. Lesheng Kong, Bernett Teck Kwong Lee, Joo Chuan Tong, Tin Wee Tan, Shoba Ranganathan
    SDPMOD: an automated comparative modeling server for small disulfide-bonded proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:356-359 [Journal]
  14. Bernett T. K. Lee, Tin Wee Tan, Shoba Ranganathan
    MGAlignIt: a web service for the alignment of mRNA/EST and genomic sequences. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3533-3536 [Journal]
  15. Johann Lenffer, Frank W. Nicholas, Kao Castle, Arjun Rao, Stefan Gregory, Michael Poidinger, Matthew D. Mailman, Shoba Ranganathan
    OMIA (Online Mendelian Inheritance in Animals): an enhanced platform and integration into the Entrez search interface at NCBI. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Database-Issue, pp:599-601 [Journal]
  16. Durgaprasad Bollina, Bernett T. K. Lee, Tin Wee Tan, Shoba Ranganathan
    ASGS: an alternative splicing graph web service. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Web-Server-Issue, pp:444-447 [Journal]

  17. Critical technologies for bioinformatics. [Citation Graph (, )][DBLP]


  18. CASVM: web server for SVM-based prediction of caspase substrates cleavage sites. [Citation Graph (, )][DBLP]


  19. Prediction of desmoglein-3 peptides reveals multiple shared T-cell epitopes in HLA DR4- and DR6- associated Pemphigus vulgaris. [Citation Graph (, )][DBLP]


  20. SVM-based prediction of caspase substrate cleavage sites. [Citation Graph (, )][DBLP]


  21. Establishing bioinformatics research in the Asia Pacific. [Citation Graph (, )][DBLP]


  22. In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches. [Citation Graph (, )][DBLP]


  23. Modeling Escherichia coli signal peptidase complex with bound substrate: determinants in the mature peptide influencing signal peptide cleavage. [Citation Graph (, )][DBLP]


  24. CMKb: a web-based prototype for integrating Australian Aboriginal customary medicinal plant knowledge. [Citation Graph (, )][DBLP]


  25. Emerging strengths in Asia Pacific bioinformatics. [Citation Graph (, )][DBLP]


  26. Flanking signal and mature peptide residues influence signal peptide cleavage. [Citation Graph (, )][DBLP]


  27. Bioinformatics research in the Asia Pacific: a 2007 update. [Citation Graph (, )][DBLP]


  28. Tandem duplication, circular permutation, molecular adaptation: how Solanaceae resist pests via inhibitors. [Citation Graph (, )][DBLP]


  29. Physicochemical property space distribution among human metabolites, drugs and toxins. [Citation Graph (, )][DBLP]


  30. A comprehensive assessment of N-terminal signal peptides prediction methods. [Citation Graph (, )][DBLP]


  31. Towards a career in bioinformatics. [Citation Graph (, )][DBLP]


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