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Publications of Author

1. I. Elizabeth Cha, Eric C. Rouchka
   Comparison of Current BLAST Software on Nucleotide Sequences. [Citation Graph (0, 0)][DBLP]
   IPDPS, 2005, pp:- [Conf]
   
2. Thomas W. Blackwell, Eric Rouchka, David J. States
   Identity by Descent Genome Segmentation Based on Single Nucleotide Polymorphism Distributions. [Citation Graph (0, 0)][DBLP]
   ISMB, 1999, pp:54-59 [Conf]
   
3. Zhengyan Kan, Warren Gish, Eric Rouchka, Jarret Glasscock, David J. States
   UTR Reconstruction and Analysis Using Genomically Aligned EST Sequences. [Citation Graph (0, 0)][DBLP]
   ISMB, 2000, pp:218-227 [Conf]
   
4. Eric Rouchka, David J. States
   Sequence Assembly Validation by Multiple Restriction Digest Fragment Coverage Analysis. [Citation Graph (0, 0)][DBLP]
   ISMB, 1998, pp:140-147 [Conf]
   
5. Eric C. Rouchka, Abdelnaby Khalyfa, Nigel G. F. Cooper
   MPrime: efficient large scale multiple primer and oligonucleotide design for customized gene microarrays. [Citation Graph (0, 0)][DBLP]
   BMC Bioinformatics, 2005, v:6, n:, pp:175- [Journal]
   
6. William Thompson, Eric C. Rouchka, Charles E. Lawrence
   Gibbs Recursive Sampler: finding transcription factor binding sites. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2003, v:31, n:13, pp:3580-3585 [Journal]
   
7. 
   Biological Sequence Mining Using Plausible Neural Network and its Application to Exon/intron Boundaries Prediction. [Citation Graph (, )][DBLP]
   
   
8. 
   Model Based Unsupervised Learning Guided by Abundant Background Samples. [Citation Graph (, )][DBLP]
   
   
9. 
   Feature Selection in Cancer Classification from mRNA Data Based on Localized Dimension Reduction. [Citation Graph (, )][DBLP]
   
   
10. 
    Compute Pairwise Manhattan Distance and Pearson Correlation Coefficient of Data Points with GPU. [Citation Graph (, )][DBLP]
    
    
11. 
    Computational Prediction of Genes Translationally Regulated by Cytoplasmic Polyadenylation Elements. [Citation Graph (, )][DBLP]
    
    
12. 
    Phylogenomic Analysis Using Bayesian Congruence Measuring. [Citation Graph (, )][DBLP]
    
    
13. 
    rMotifGen: random motif generator for DNA and protein sequences. [Citation Graph (, )][DBLP]
    
    
14. 
    Techniques for the analysis of trichome Pelagonium xhortorum expressed sequence tags. [Citation Graph (, )][DBLP]
    
    
15. 
    Buffered codons in human transcriptional units. [Citation Graph (, )][DBLP]
    
    
16. 
    Proceedings of the Seventh Annual UT-ORNL-KBRIN Bioinformatics Summit 2008. [Citation Graph (, )][DBLP]
    
    
17. 
    Random number generation for DNA-based security circuitry. [Citation Graph (, )][DBLP]
    
    
18. 
    Proceedings of the Eighth Annual UT-ORNL-KBRIN Bioinformatics Summit 2009. [Citation Graph (, )][DBLP]
    
    
19. 
    Aligning DNA sequences using dynamic programming. [Citation Graph (, )][DBLP]