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Publications of Author

1. Fabrice Armougom, Sébastien Moretti, Vladimir Keduas, Cédric Notredame
   The iRMSD: a local measure of sequence alignment accuracy using structural information. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2006, pp:35-39 [Conf]
   
2. Orla O'Sullivan, Mark Zehnder, Desmond G. Higgins, Philipp Bucher, Aurelien Grosdidier, Cédric Notredame
   APDB: a novel measure for benchmarking sequence alignment methods without reference alignments. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2003, pp:215-221 [Conf]
   
3. Cédric Notredame
   Mocca: semi-automatic method for domain hunting. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2001, v:17, n:4, pp:373-374 [Journal]
   
4. Cédric Notredame, Liisa Holm, Desmond G. Higgins
   COFFEE: an objective function for multiple sequence alignments. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 1998, v:14, n:5, pp:407-422 [Journal]
   
5. Emmet A. O'Brien, Cédric Notredame, Desmond G. Higgins
   Optimization of ribosomal RNA profile alignments. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 1998, v:14, n:4, pp:332-341 [Journal]
   
6. Fabrice Armougom, Olivier Poirot, Sébastien Moretti, Desmond G. Higgins, Phillip Bucher, Vladimir Keduas, Cédric Notredame
   APDB: a web server to evaluate the accuracy of sequence alignments using structural information. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:19, pp:2439-2440 [Journal]
   
7. Jean-Baptiste Claude, Karsten Suhre, Cédric Notredame, Jean-Michel Claverie, Chantal Abergel
   CaspR: a web server for automated molecular replacement using homology modelling. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:606-609 [Journal]
   
8. Sabine Dietmann, Jong Park, Cédric Notredame, Andreas Heger, Michael Lappe, Liisa Holm
   A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2001, v:29, n:1, pp:55-57 [Journal]
   
9. Olivier Poirot, Eamonn O'Toole, Cédric Notredame
   Tcoffee add igs: a web server for computing, evaluating and combining multiple sequence alignments. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2003, v:31, n:13, pp:3503-3506 [Journal]
   
10. Olivier Poirot, Karsten Suhre, Chantal Abergel, Eamonn O'Toole, Cédric Notredame
    3DCoffee@igs: a web server for combining sequences and structures into a multiple sequence alignment. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:37-40 [Journal]
    
11. Fabrice Armougom, Sébastien Moretti, Olivier Poirot, Stéphane Audic, Pierre Dumas, Basile Schaeli, Vladimir Keduas, Cédric Notredame
    Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Web-Server-Issue, pp:604-608 [Journal]
    
12. Sébastien Moretti, Frédéric Reinier, Olivier Poirot, Fabrice Armougom, Stéphane Audic, Vladimir Keduas, Cédric Notredame
    PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignments. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Web-Server-Issue, pp:600-603 [Journal]
    
13. 
    Segment-based multiple sequence alignment. [Citation Graph (, )][DBLP]
    
    
14. 
    Invited Talk: Combining Sequence Information with T-Coffee. [Citation Graph (, )][DBLP]
    
    
15. 
    Upcoming challenges for multiple sequence alignment methods in the high-throughput era. [Citation Graph (, )][DBLP]
    
    
16. 
    Cloud-Coffee: implementation of a parallel consistency-based multiple alignment algorithm in the T-Coffee package and its benchmarking on the Amazon Elastic-Cloud. [Citation Graph (, )][DBLP]