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Publications of Author

1. Erik Granseth, Håkan Viklund, Arne Elofsson
   ZPRED: Predicting the distance to the membrane center for residues in alpha-helical membrane proteins. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2006, pp:191-196 [Conf]
   
2. Olivia Eriksson, Yishao Zhou, Arne Elofsson
   Side Chain-Positioning as an Integer Programming Problem. [Citation Graph (0, 0)][DBLP]
   WABI, 2001, pp:128-141 [Conf]
   
3. Janusz M. Bujnicki, Arne Elofsson, Daniel Fischer, Leszek Rychlewski
   Structure prediction meta server. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2001, v:17, n:8, pp:750-751 [Journal]
   
4. Arne Elofsson, Erik L. L. Sonnhammer
   A comparison of sequence and structure protein domain families as a basis for structural genomics. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 1999, v:15, n:6, pp:480-500 [Journal]
   
5. Krzysztof Ginalski, Arne Elofsson, Daniel Fischer, Leszek Rychlewski
   3D-Jury: A Simple Approach to Improve Protein Structure Predictions. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2003, v:19, n:8, pp:1015-1018 [Journal]
   
6. Naomi Siew, Arne Elofsson, Leszek Rychlewski, Daniel Fischer
   MaxSub: an automated measure for the assessment of protein structure prediction quality. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2000, v:16, n:9, pp:776-785 [Journal]
   
7. Björn Wallner, Arne Elofsson
   Pcons5: combining consensus, structural evaluation and fold recognition scores. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:23, pp:4248-4254 [Journal]
   
8. Pierre Dönnes, Arne Elofsson
   Prediction of MHC class I binding peptides, using SVMHC. [Citation Graph (0, 0)][DBLP]
   BMC Bioinformatics, 2002, v:3, n:, pp:25- [Journal]
   
9. Susana Cristobal, Adam Zemla, Daniel Fischer, Leszek Rychlewski, Arne Elofsson
   A study of quality measures for protein threading models. [Citation Graph (0, 0)][DBLP]
   BMC Bioinformatics, 2001, v:2, n:, pp:5- [Journal]
   
10. Tomas Ohlson, Arne Elofsson
    ProfNet, a method to derive profile-profile alignment scoring functions that improves the alignments of distantly related proteins. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2005, v:6, n:, pp:253- [Journal]
    
11. Mauro Amico, Michele Finelli, Ivan Rossi, Andrea Zauli, Arne Elofsson, Håkan Viklund, Gunnar von Heijne, David Jones, Anders Krogh, Piero Fariselli, Pier Luigi Martelli, Rita Casadio
    PONGO: a web server for multiple predictions of all-alpha transmembrane proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Web-Server-Issue, pp:169-172 [Journal]
    
12. 
    OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar. [Citation Graph (, )][DBLP]
    
    
13. 
    SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology. [Citation Graph (, )][DBLP]
    
    
14. 
    Improved alignment quality by combining evolutionary information, predicted secondary structure and self-organizing maps. [Citation Graph (, )][DBLP]
    
    
15. 
    MPRAP: An accessibility predictor for alpha-helical transmembrane proteins that performs well inside and outside the membrane. [Citation Graph (, )][DBLP]