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Publications of Author

1. Niranjan Nagarajan, Neil Jones, Uri Keich
   Computing the P-value of the information content from an alignment of multiple sequences. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2005, pp:311-318 [Conf]
   
2. Patrick Ng, Niranjan Nagarajan, Neil Jones, Uri Keich
   Apples to apples: improving the performance of motif finders and their significance analysis in the Twilight Zone. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2006, pp:393-401 [Conf]
   
3. Eleazar Eskin, Uri Keich, Mikhail S. Gelfand, Pavel A. Pevzner
   Genome-Wide Analysis of Bacterial Promoter Regions. [Citation Graph (0, 0)][DBLP]
   Pacific Symposium on Biocomputing, 2003, pp:29-40 [Conf]
   
4. Jeremy Buhler, Uri Keich, Yanni Sun
   Designing seeds for similarity search in genomic DNA. [Citation Graph (0, 0)][DBLP]
   RECOMB, 2003, pp:67-75 [Conf]
   
5. Uri Keich, Pavel A. Pevzner
   Finding motifs in the twilight zone. [Citation Graph (0, 0)][DBLP]
   RECOMB, 2002, pp:195-204 [Conf]
   
6. Uri Keich, Niranjan Nagarajan
   A Faster Reliable Algorithm to Estimate the p-Value of the Multinomial llr Statistic. [Citation Graph (0, 0)][DBLP]
   WABI, 2004, pp:111-122 [Conf]
   
7. Uri Keich, Pavel A. Pevzner
   Finding motifs in the twilight zone. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2002, v:18, n:10, pp:1374-1381 [Journal]
   
8. Uri Keich, Pavel A. Pevzner
   U Subtle motifs: defining the limits of motif finding algorithms. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2002, v:18, n:10, pp:1382-1390 [Journal]
   
9. Uri Keich, Ming Li, Bin Ma, John Tromp
   On spaced seeds for similarity search. [Citation Graph (0, 0)][DBLP]
   Discrete Applied Mathematics, 2004, v:138, n:3, pp:253-263 [Journal]
   
10. Uri Keich
    sFFT: A Faster Accurate Computation of the p-Value of the Entropy Score. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2005, v:12, n:4, pp:416-430 [Journal]
    
11. Jeremy Buhler, Uri Keich, Yanni Sun
    Designing seeds for similarity search in genomic DNA. [Citation Graph (0, 0)][DBLP]
    J. Comput. Syst. Sci., 2005, v:70, n:3, pp:342-363 [Journal]
    
12. Ron Aharoni, Uri Keich
    A generalization of the Ahlswede-Daykin inequality. [Citation Graph (0, 0)][DBLP]
    Discrete Mathematics, 1996, v:152, n:1-3, pp:1-12 [Journal]
    
13. Degui Zhi, Uri Keich, Pavel A. Pevzner, Steffen Heber, Haixu Tang
    Correcting Base-Assignment Errors in Repeat Regions of Shotgun Assembly. [Citation Graph (0, 0)][DBLP]
    IEEE/ACM Trans. Comput. Biology Bioinform., 2007, v:4, n:1, pp:54-64 [Journal]
    
14. 
    GIMSAN: a Gibbs motif finder with significance analysis. [Citation Graph (, )][DBLP]
    
    
15. 
    FAST: Fourier transform based algorithms for significance testing of ungapped multiple alignments. [Citation Graph (, )][DBLP]
    
    
16. 
    Computational detection of significant variation in binding affinity across two sets of sequences with application to the analysis of replication origins in yeast. [Citation Graph (, )][DBLP]