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Publications of Author

1. Koji Tsuda, Taishin Kin, Kiyoshi Asai
   Marginalized kernels for biological sequences. [Citation Graph (0, 0)][DBLP]
   ISMB, 2002, pp:268-275 [Conf]
   
2. Yasuo Tabei, Koji Tsuda, Taishin Kin, Kiyoshi Asai
   SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:14, pp:1723-1729 [Journal]
   
3. Michiaki Hamada, Koji Tsuda, Taku Kudo, Taishin Kin, Kiyoshi Asai
   Mining frequent stem patterns from unaligned RNA sequences. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:20, pp:2480-2487 [Journal]
   
4. Hisanori Kiryu, Taishin Kin, Kiyoshi Asai
   Robust prediction of consensus secondary structures using averaged base pairing probability matrices. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2007, v:23, n:4, pp:434-441 [Journal]
   
5. Taishin Kin, Kouichirou Yamada, Goro Terai, Hiroaki Okida, Yasuhiko Yoshinari, Yukiteru Ono, Aya Kojima, Yuki Kimura, Takashi Komori, Kiyoshi Asai
   fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2007, v:35, n:Database-Issue, pp:145-148 [Journal]
   
6. Koji Tsuda, Shinsuke Uda, Taishin Kin, Kiyoshi Asai
   Minimizing the Cross Validation Error to Mix Kernel Matrices of Heterogeneous Biological Data. [Citation Graph (0, 0)][DBLP]
   Neural Processing Letters, 2004, v:19, n:1, pp:63-72 [Journal]
   
7. 
   Idiographica: a general-purpose web application to build idiograms on-demand for human, mouse and rat. [Citation Graph (, )][DBLP]
   
   
8. 
   Murlet: a practical multiple alignment tool for structural RNA sequences. [Citation Graph (, )][DBLP]
   
   
9. 
   Rfold: an exact algorithm for computing local base pairing probabilities. [Citation Graph (, )][DBLP]
   
   
10. 
    A fast structural multiple alignment method for long RNA sequences. [Citation Graph (, )][DBLP]