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Herbert M. Sauro: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Michael Hucka, Andrew Finney, Herbert M. Sauro, H. Bolouri, John C. Doyle, Hiroaki Kitano
    The ERATO Systems Biology Workbench: Enabling Interaction and Exchange Between Software Tools for Computational Biology. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2002, pp:450-461 [Conf]
  2. Herbert M. Sauro, David Harel, Marta Z. Kwiatkowska, Clifford A. Shaffer, Adelinde M. Uhrmacher, Michael Hucka, Pedro Mendes, Lena Strömbäck, John J. Tyson
    Challenges for modeling and simulation methods in systems biology. [Citation Graph (0, 0)][DBLP]
    Winter Simulation Conference, 2006, pp:1720-1730 [Conf]
  3. Frank T. Bergmann, Herbert M. Sauro
    SBW - a modular framework for systems biology. [Citation Graph (0, 0)][DBLP]
    Winter Simulation Conference, 2006, pp:1637-1645 [Conf]
  4. Ravishankar Rao Vallabhajosyula, Herbert M. Sauro
    Complexity reduction of biochemical networks. [Citation Graph (0, 0)][DBLP]
    Winter Simulation Conference, 2006, pp:1690-1697 [Conf]
  5. Herbert M. Sauro
    Innovation in software for systems biology: is there any? [Citation Graph (0, 0)][DBLP]
    Winter Simulation Conference, 2006, pp:1586- [Conf]
  6. Vijay Chickarmane, Sri R. Paladugu, Frank T. Bergmann, Herbert M. Sauro
    Bifurcation discovery tool. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:18, pp:3688-3690 [Journal]
  7. Michael Hucka, Andrew Finney, Herbert M. Sauro, H. Bolouri, John C. Doyle, Hiroaki Kitano, Adam P. Arkin, Benjamin J. Bornstein, D. Bray, A. Cornish-Bowden, A. A. Cuellar, S. Dronov, Ernst Dieter Gilles, Martin Ginkel, Victoria Gor, Igor Goryanin, W. J. Hedley, T. Charles Hodgman, J. H. Hofmeyr, P. J. Hunter, Nick S. Juty, J. L. Kasberger, Andreas Kremling, Ursula Kummer, Nicolas Le Novère, Leslie M. Loew, D. Lucio, Pedro Mendes, E. Minch, Eric Mjolsness, Yoichi Nakayama, M. R. Nelson, P. F. Nielsen, T. Sakurada, James C. Schaff, Bruce E. Shapiro, Thomas Simon Shimizu, Hugh D. Spence, Jörg Stelling, Koichi Takahashi, Masaru Tomita, J. Wagner, J. Wang
    The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:4, pp:524-531 [Journal]
  8. Ravishankar Rao Vallabhajosyula, Vijay Chickarmane, Herbert M. Sauro
    Conservation analysis of large biochemical networks. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:3, pp:346-353 [Journal]
  9. Cameron Wellock, Vijay Chickarmane, Herbert M. Sauro
    The SBW-CMATLAB interface. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:6, pp:823-824 [Journal]
  10. Anastasia Deckard, Frank T. Bergmann, Herbert M. Sauro
    Supporting the SBML layout extension. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:23, pp:2966-2967 [Journal]
  11. Nicolas Le Novère, Benjamin J. Bornstein, Alexander Broicher, Mélanie Courtot, Marco Donizelli, Harish Dharuri, Lu Li, Herbert M. Sauro, Maria J. Schilstra, Bruce E. Shapiro, Jacky L. Snoep, Michael Hucka
    BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Database-Issue, pp:689-691 [Journal]

  12. Stochastic simulation GUI for biochemical networks. [Citation Graph (, )][DBLP]


  13. Comparing simulation results of SBML capable simulators. [Citation Graph (, )][DBLP]


  14. Antimony: a modular model definition language. [Citation Graph (, )][DBLP]


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