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Publications of Author

1. Ram Samudrala, Yu Xia 0002, M. Levitt, Enoch S. Huang
   A Combined Approach for Ab Initio Construction of Low Resolution Protein Tertiary Structures from Sequence. [Citation Graph (0, 0)][DBLP]
   Pacific Symposium on Biocomputing, 1999, pp:505-516 [Conf]
   
2. Aaron N. Chang, Jason McDermott, Ram Samudrala
   An enhanced Java graph applet interface for visualizing interactomes. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:8, pp:1741-1742 [Journal]
   
3. Jason McDermott, Roger Eugene Bumgarner, Ram Samudrala
   Functional annotation from predicted protein interaction networks. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:15, pp:3217-3226 [Journal]
   
4. Kai Wang, Ram Samudrala
   FSSA: a novel method for identifying functional signatures from structural alignments. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:13, pp:2969-2977 [Journal]
   
5. Aaron N. Chang, Jason McDermott, Zachary Frazier, Michal Guerquin, Ram Samudrala
   INTEGRATOR: interactive graphical search of large protein interactomes over the Web. [Citation Graph (0, 0)][DBLP]
   BMC Bioinformatics, 2006, v:7, n:, pp:146- [Journal]
   
6. Ling-Hong Hung, Ram Samudrala
   PROTINFO: secondary and tertiary protein structure prediction. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2003, v:31, n:13, pp:3296-3299 [Journal]
   
7. Jason McDermott, Ram Samudrala
   Bioverse: functional, structural and contextual annotation of proteins and proteomes. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2003, v:31, n:13, pp:3736-3737 [Journal]
   
8. Jason McDermott, Michal Guerquin, Zachary Frazier, Aaron N. Chang, Ram Samudrala
   BIOVERSE: enhancements to the framework for structural, functional and contextual modeling of proteins and proteomes. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2005, v:33, n:Web-Server-Issue, pp:324-325 [Journal]
   
9. Ling-Hong Hung, Shing-Chung Ngan, Tianyun Liu, Ram Samudrala
   PROTINFO: new algorithms for enhanced protein structure predictions. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2005, v:33, n:Web-Server-Issue, pp:77-80 [Journal]
   
10. 
    A novel knowledge-based approach to design inorganic-binding peptides. [Citation Graph (, )][DBLP]
    
    
11. 
    Identification of potential HIV-1 targets of minocycline. [Citation Graph (, )][DBLP]
    
    
12. 
    Automated functional classification of experimental and predicted protein structures. [Citation Graph (, )][DBLP]
    
    
13. 
    Incorporating background frequency improves entropy-based residue conservation measures. [Citation Graph (, )][DBLP]