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Publications of Author

1. Can Alkan, Emre Karakoç, Joseph H. Nadeau, Süleyman Cenk Sahinalp, Kaizhong Zhang
   RNA-RNA Interaction Prediction and Antisense RNA Target Search. [Citation Graph (0, 0)][DBLP]
   RECOMB, 2005, pp:152-171 [Conf]
   
2. Can Alkan, Emre Karakoç, Süleyman Cenk Sahinalp, Peter J. Unrau, H. Alexander Ebhardt, Kaizhong Zhang, Jeremy Buhler
   RNA Secondary Structure Prediction Via Energy Density Minimization. [Citation Graph (0, 0)][DBLP]
   RECOMB, 2006, pp:130-142 [Conf]
   
3. Can Alkan, Evan E. Eichler, Jeffrey A. Bailey, Süleyman Cenk Sahinalp, Eray Tüzün
   The Role of Unequal Crossover in Alpha-Satellite DNA Evolution: A Computational Analysis. [Citation Graph (0, 0)][DBLP]
   Journal of Computational Biology, 2004, v:11, n:5, pp:933-944 [Journal]
   
4. Can Alkan, Eray Tüzün, Jerome Buard, Franck Lethiec, Evan E. Eichler, Jeffrey A. Bailey, Süleyman Cenk Sahinalp
   Manipulating multiple sequence alignments via MaM and WebMaM. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2005, v:33, n:Web-Server-Issue, pp:295-298 [Journal]
   
5. 
   Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes. [Citation Graph (, )][DBLP]
   
   
6. 
   Detection and characterization of novel sequence insertions using paired-end next-generation sequencing. [Citation Graph (, )][DBLP]
   
   
7. 
   Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery. [Citation Graph (, )][DBLP]