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Publications of Author

1. Banu Dost, Tomer Shlomi, Nitin Gupta 0002, Eytan Ruppin, Vineet Bafna, Roded Sharan
   QNet: A Tool for Querying Protein Interaction Networks. [Citation Graph (0, 0)][DBLP]
   RECOMB, 2007, pp:1-15 [Conf]
   
2. Oleg Rokhlenko, Tomer Shlomi, Roded Sharan, Eytan Ruppin, Ron Y. Pinter
   Flux-Based vs. Topology-Based Similarity of Metabolic Genes. [Citation Graph (0, 0)][DBLP]
   WABI, 2006, pp:274-285 [Conf]
   
3. Tomer Shlomi, Daniel Segal, Eytan Ruppin, Roded Sharan
   QPath: a method for querying pathways in a protein-protein interaction network. [Citation Graph (0, 0)][DBLP]
   BMC Bioinformatics, 2006, v:7, n:, pp:199- [Journal]
   
4. Silpa Suthram, Tomer Shlomi, Eytan Ruppin, Roded Sharan, Trey Ideker
   Comparison of Protein-Protein Interaction Confidence Assignment Schemes. [Citation Graph (0, 0)][DBLP]
   Systems Biology and Regulatory Genomics, 2005, pp:39-50 [Conf]
   
5. 
   SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments. [Citation Graph (, )][DBLP]
   
   
6. 
   Pathway-Based Functional Analysis of Metagenomes. [Citation Graph (, )][DBLP]
   
   
7. 
   Constraint-based functional similarity of metabolic genes: going beyond network topology. [Citation Graph (, )][DBLP]
   
   
8. 
   Pepitope: epitope mapping from affinity-selected peptides. [Citation Graph (, )][DBLP]
   
   
9. 
   Network-based prediction of metabolic enzymes' subcellular localization. [Citation Graph (, )][DBLP]
   
   
10. 
    Predicting metabolic engineering knockout strategies for chemical production: accounting for competing pathways. [Citation Graph (, )][DBLP]
    
    
11. 
    Integrating quantitative proteomics and metabolomics with a genome-scale metabolic network model. [Citation Graph (, )][DBLP]
    
    
12. 
    A direct comparison of protein interaction confidence assignment schemes. [Citation Graph (, )][DBLP]