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Publications of Author

1. Lev Soinov, Alexander Kanapin, Misha Kapushesky
   Supervised Learning-Aided Optimization of Expert-Driven Functional Protein Sequence Annotation. [Citation Graph (0, 0)][DBLP]
   WABI, 2004, pp:159-169 [Conf]
   
2. Jonathon Blake, Christian Schwager, Misha Kapushesky, Alvis Brazma
   ChroCoLoc: an application for calculating the probability of co-localization of microarray gene expression. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:6, pp:765-767 [Journal]
   
3. Ugis Sarkans, Helen E. Parkinson, Gonzalo Garcia Lara, Ahmet Oezcimen, Anjan Sharma, Niran Abeygunawardena, Sergio Contrino, Ele Holloway, Philippe Rocca-Serra, Gaurab Mukherjee, Mohammadreza Shojatalab, Misha Kapushesky, Susanna-Assunta Sansone, Anna Farne, Tim Rayner, Alvis Brazma
   The ArrayExpress gene expression database: a software engineering and implementation perspective. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:8, pp:1495-1501 [Journal]
   
4. Aurora Torrente, Misha Kapushesky, Alvis Brazma
   A new algorithm for comparing and visualizing relationships between hierarchical and flat gene expression data clusterings. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:21, pp:3993-3999 [Journal]
   
5. Alvis Brazma, Helen E. Parkinson, Ugis Sarkans, Mohammadreza Shojatalab, Jaak Vilo, Niran Abeygunawardena, Ele Holloway, Misha Kapushesky, Patrick Kemmeren, Gonzalo Garcia Lara, Ahmet Oezcimen, Philippe Rocca-Serra, Susanna-Assunta Sansone
   ArrayExpress - a public repository for microarray gene expression data at the EBI. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2003, v:31, n:1, pp:68-71 [Journal]
   
6. Misha Kapushesky, Patrick Kemmeren, Aedín C. Culhane, Steffen Durinck, Jan Ihmels, Christine Körner, Meelis Kull, Aurora Torrente, Ugis Sarkans, Jaak Vilo, Alvis Brazma
   Expression Profiler: next generation - an online platform for analysis of microarray data. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:465-470 [Journal]
   
7. Helen E. Parkinson, Ugis Sarkans, Mohammadreza Shojatalab, Niran Abeygunawardena, Sergio Contrino, R. Coulson, Anna Farne, Gonzalo Garcia Lara, Ele Holloway, Misha Kapushesky, P. Lilja, Gaurab Mukherjee, Ahmet Oezcimen, Tim Rayner, Philippe Rocca-Serra, Anjan Sharma, Susanna-Assunta Sansone, Alvis Brazma
   ArrayExpress - a public repository for microarray gene expression data at the EBI. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2005, v:33, n:Database-Issue, pp:553-555 [Journal]
   
8. Helen E. Parkinson, Misha Kapushesky, Mohammadreza Shojatalab, Niran Abeygunawardena, R. Coulson, Anna Farne, Ele Holloway, N. Kolesnykov, P. Lilja, M. Lukk, R. Mani, Tim Rayner, Anjan Sharma, E. William, Ugis Sarkans, Alvis Brazma
   ArrayExpress - a public database of microarray experiments and gene expression profiles. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2007, v:35, n:Database-Issue, pp:747-750 [Journal]
   
9. 
   Comparing and Analysing Gene Expression Patterns Across Animal Species Using 4DXpress. [Citation Graph (, )][DBLP]
   
   
10. 
    Developing an Ontology from the Application Up. [Citation Graph (, )][DBLP]
    
    
11. 
    Importing ArrayExpress datasets into R/Bioconductor. [Citation Graph (, )][DBLP]
    
    
12. 
    Modeling sample variables with an Experimental Factor Ontology. [Citation Graph (, )][DBLP]