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Hiroyuki Toh: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Sachiyo Aburatani, Kousuke Goto, Shigeru Saito, Masaki Fumoto, Akira Imaizumi, Nobuyoshi Sugaya, Hiroo Murakami, Makihiko Sato, Hiroyuki Toh, Katsuhisa Horimoto
    ASIAN: a website for network inference. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:16, pp:2853-2856 [Journal]
  2. Katsuhisa Horimoto, M. Suyama, Hiroyuki Toh, Kentaro Mori, Jinya Otsuka
    A method for comparing circular genomes from gene locations: application to mitochondrial genomes. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1998, v:14, n:9, pp:789-802 [Journal]
  3. Katsuhisa Horimoto, Hiroyuki Toh
    Statistical estimation of cluster boundaries in gene expression profile data. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2001, v:17, n:12, pp:1143-1151 [Journal]
  4. Hiroyuki Toh
    Introduction of a distance cut-off into structural alignment by the double dynamic programming algorithm. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1997, v:13, n:4, pp:387-396 [Journal]
  5. Tetsuya Sato, Yoshihiro Yamanishi, Minoru Kanehisa, Hiroyuki Toh
    The inference of protein-protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationships. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:17, pp:3482-3489 [Journal]
  6. Hiroyuki Toh, Katsuhisa Horimoto
    Inference of a genetic network by a combined approach of cluster analysis and graphical Gaussian modeling. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2002, v:18, n:2, pp:287-297 [Journal]
  7. Tetsuya Sato, Yoshihiro Yamanishi, Katsuhisa Horimoto, Minoru Kanehisa, Hiroyuki Toh
    Partial correlation coefficient between distance matrices as a new indicator of protein-protein interactions. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:20, pp:2488-2492 [Journal]
  8. Kazutaka Katoh, Hiroyuki Toh
    PartTree: an algorithm to build an approximate tree from a large number of unaligned sequences. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:3, pp:372-374 [Journal]
  9. Daron M. Standley, Hiroyuki Toh, Haruki Nakamura
    GASH: An improved algorithm for maximizing the number of equivalent residues between two protein structures. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2005, v:6, n:, pp:221- [Journal]
  10. Sachiyo Aburatani, Kousuke Goto, Shigeru Saito, Hiroyuki Toh, Katsuhisa Horimoto
    ASIAN: a web server for inferring a regulatory network framework from gene expression profiles. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Web-Server-Issue, pp:659-664 [Journal]
  11. Sachiyo Aburatani, Satoru Kuhara, Hiroyuki Toh, Katsuhisa Horimoto
    Deduction of a gene regulatory relationship framework from gene expression data by the application of graphical Gaussian modeling. [Citation Graph (0, 0)][DBLP]
    Signal Processing, 2003, v:83, n:4, pp:777-788 [Journal]
  12. Tetsuya Sato, Yoshihiro Yamanishi, Katsuhisa Horimoto, Minoru Kanehisa, Hiroyuki Toh
    Inference of Protein-Protein Interactions by Using Co-evolutionary Information. [Citation Graph (0, 0)][DBLP]
    AB, 2007, pp:322-333 [Conf]

  13. Recent developments in the MAFFT multiple sequence alignment program. [Citation Graph (, )][DBLP]


  14. SeSAW: balancing sequence and structural information in protein functional mapping. [Citation Graph (, )][DBLP]


  15. Parallelization of the MAFFT multiple sequence alignment program. [Citation Graph (, )][DBLP]


  16. ASH structure alignment package: Sensitivity and selectivity in domain classification. [Citation Graph (, )][DBLP]


  17. Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework. [Citation Graph (, )][DBLP]


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