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Jonas S. Almeida: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Jonas S. Almeida, João A. Carriço, António Maretzek, Peter A. Noble, Madilyn Fletcher
    Analysis of genomic sequences by Chaos Game Representation. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2001, v:17, n:5, pp:429-437 [Journal]
  2. F. R. Pinto, L. Ashley Cowart, Yusuf A. Hannun, B. Rohrer, Jonas S. Almeida
    Local correlation of expression profiles with gene annotations-proof of concept for a general conciliatory method. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:7, pp:1037-1045 [Journal]
  3. Romesh Stanislaus, Chuming Chen, Jennifer Franklin, John Arthur, Jonas S. Almeida
    AGML Central: web based gel proteomic infrastructure. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:9, pp:1754-1757 [Journal]
  4. Susana Vinga, Jonas S. Almeida
    Alignment-free sequence comparison-a review. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:4, pp:513-523 [Journal]
  5. Susana Vinga, Rodrigo Gouveia-Oliveira, Jonas S. Almeida
    Comparative evaluation of word composition distances for the recognition of SCOP relationships. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:2, pp:206-215 [Journal]
  6. Eberhard O. Voit, Jonas S. Almeida
    Decoupling dynamical systems for pathway identification from metabolic profiles. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:11, pp:1670-1681 [Journal]
  7. Yuliya V. Karpievitch, Elizabeth G. Hill, Adam J. Smolka, Jeffrey S. Morris, Kevin R. Coombes, Keith A. Baggerly, Jonas S. Almeida
    PrepMS: TOF MS data graphical preprocessing tool. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:2, pp:264-265 [Journal]
  8. Jonas S. Almeida, Susana Vinga
    Universal sequence map (USM) of arbitrary discrete sequences. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2002, v:3, n:, pp:6- [Journal]
  9. Yian A. Chen, Cheng-Chung Chou, Xinghua Lu, Elizabeth H. Slate, Konan Peck, Wenying Xu, Eberhard O. Voit, Jonas S. Almeida
    A multivariate prediction model for microarray cross-hybridization. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2006, v:7, n:, pp:101- [Journal]
  10. Yian A. Chen, David J. Mckillen, Shuyuan Wu, Matthew J. Jenny, Robert Chapman, Paul S. Gross, Gregory W. Warr, Jonas S. Almeida
    Optimal cDNA microarray design using expressed sequence tags for organisms with limited genomic information. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:191- [Journal]
  11. Yuliya V. Karpievitch, Jonas S. Almeida
    mGrid: A load-balanced distributed computing environment for the remote execution of the user-defined Matlab code. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2006, v:7, n:, pp:139- [Journal]
  12. John Schwacke, Jonas S. Almeida
    Efficient Boolean implementation of universal sequence maps (bUSM). [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2002, v:3, n:, pp:28- [Journal]
  13. Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, John Arthur, Jonas S. Almeida
    An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:9- [Journal]

  14. Ontology Design Principles and Normalization Techniques in the Web. [Citation Graph (, )][DBLP]


  15. Ranked Adjusted Rand: integrating distance and partition information in a measure of clustering agreement. [Citation Graph (, )][DBLP]


  16. Automated smoother for the numerical decoupling of dynamics models. [Citation Graph (, )][DBLP]


  17. Local Renyi entropic profiles of DNA sequences. [Citation Graph (, )][DBLP]


  18. An open-source representation for 2-DE-centric proteomics and support infrastructure for data storage and analysis. [Citation Graph (, )][DBLP]


  19. RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays. [Citation Graph (, )][DBLP]


  20. Biological sequences as pictures - a generic two dimensional solution for iterated maps. [Citation Graph (, )][DBLP]


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