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Nick V. Grishin: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Vyacheslav N. Grishin, Nick V. Grishin
    Euclidian space and grouping of biological objects. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2002, v:18, n:11, pp:1523-1534 [Journal]
  2. Yuan Qi, Nick V. Grishin
    PCOAT: positional correlation analysis using multiple methods. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:18, pp:3697-3699 [Journal]
  3. S. Sri Krishna, Nick V. Grishin
    Structural drift: a possible path to protein fold change. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:8, pp:1308-1310 [Journal]
  4. David Mittelman, Ruslan Sadreyev, Nick V. Grishin
    Probabilistic scoring measures for profile-profile comparison yield more accurate short seed alignments. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:12, pp:1531-1539 [Journal]
  5. Jimin Pei, Wei Cai, Lisa N. Kinch, Nick V. Grishin
    Prediction of functional specificity determinants from protein sequences using log-likelihood ratios. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:2, pp:164-171 [Journal]
  6. Jimin Pei, Nick V. Grishin
    AL2CO: calculation of positional conservation in a protein sequence alignment. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2001, v:17, n:8, pp:700-712 [Journal]
  7. Jimin Pei, Ruslan Sadreyev, Nick V. Grishin
    PCMA: fast and accurate multiple sequence alignment based on profile consistency. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:3, pp:427-428 [Journal]
  8. Ruslan Sadreyev, Nick V. Grishin
    Quality of alignment comparison by COMPASS improves with inclusion of diverse confident homologs. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:6, pp:818-828 [Journal]
  9. Kira S. Makarova, Nick V. Grishin, Eugene V. Koonin
    The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin system in archaea and bacteria. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:21, pp:2581-2584 [Journal]
  10. Jimin Pei, Nick V. Grishin
    PROMALS: towards accurate multiple sequence alignments of distantly related proteins. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:7, pp:802-808 [Journal]
  11. Sara Cheek, Yuan Qi, S. Sri Krishna, Lisa N. Kinch, Nick V. Grishin
    SCOPmap: Automated assignment of protein structures to evolutionary superfamilies. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:197- [Journal]
  12. Indraneel Majumdar, S. Sri Krishna, Nick V. Grishin
    PALSSE: A program to delineate linear secondary structural elements from protein structures. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2005, v:6, n:, pp:202- [Journal]
  13. Ruslan Sadreyev, Nick V. Grishin
    Estimates of statistical significance for comparison of individual positions in multiple sequence alignments. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:106- [Journal]
  14. Krzysztof Ginalski, Marcin von Grotthuss, Nick V. Grishin, Leszek Rychlewski
    Detecting distant homology with Meta-BASIC. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:576-581 [Journal]
  15. Shuoyong Shi, Yi Zhong, Indraneel Majumdar, S. Sri Krishna, Nick V. Grishin
    Searching for three-dimensional secondary structural patterns in proteins with ProSMoS. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:11, pp:1331-1338 [Journal]

  16. Structural Differences between Proteins with Similar Sequences. [Citation Graph (, )][DBLP]


  17. Structure similarity measure with penalty for close non-equivalent residues. [Citation Graph (, )][DBLP]


  18. PROCAIN server for remote protein sequence similarity search. [Citation Graph (, )][DBLP]


  19. Phenotypic categorization of genetic skin diseases reveals new relations between phenotypes, genes and pathways. [Citation Graph (, )][DBLP]


  20. HangOut: generating clean PSI-BLAST profiles for domains with long insertions. [Citation Graph (, )][DBLP]


  21. A comprehensive system for evaluation of remote sequence similarity detection. [Citation Graph (, )][DBLP]


  22. Considering scores between unrelated proteins in the search database improves profile comparison. [Citation Graph (, )][DBLP]


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