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Toby J. Gibson: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Chenna Ramu, Christine Gemünd, Toby J. Gibson
    Object-oriented parsing of biological databases with Python. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2000, v:16, n:7, pp:628-638 [Journal]
  2. Julie Dawn Thompson, Desmond G. Higgins, Toby J. Gibson
    Improved sensitivity of profile searches through the use of sequence weights and gap excision. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1994, v:10, n:1, pp:19-29 [Journal]
  3. Francesca Diella, Scott Cameron, Christine Gemünd, Rune Linding, Allegra Via, Bernhard Küster, Thomas Sicheritz-Pontén, Nikolaj Blom, Toby J. Gibson
    Phospho.ELM: A database of experimentally verified phosphorylation sites in eukaryotic proteins. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:79- [Journal]
  4. Konstantinos Bimpikis, Aidan Budd, Rune Linding, Toby J. Gibson
    BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3792-3794 [Journal]
  5. Chenna Ramu, Hideaki Sugawara, Tadashi Koike, Rodrigo Lopez, Toby J. Gibson, Desmond G. Higgins, Julie Dawn Thompson
    Multiple sequence alignment with the Clustal series of programs. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3497-3500 [Journal]
  6. Toby J. Gibson, Julie Dawn Thompson
    Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1994, v:22, n:13, pp:2552-2556 [Journal]
  7. Rune Linding, Robert B. Russell, Victor Neduva, Toby J. Gibson
    GlobPlot: exploring protein sequences for globularity and disorder. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3701-3708 [Journal]
  8. Pål Puntervoll, Rune Linding, Christine Gemünd, Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. A. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Stanislaw Wyrwicz, Chenna Ramu, Caroline McGuigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, Toby J. Gibson
    ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3625-3630 [Journal]

  9. Clustal W and Clustal X version 2.0. [Citation Graph (, )][DBLP]


  10. Discovery of candidate KEN-box motifs using Cell Cycle keyword enrichment combined with native disorder prediction and motif conservation. [Citation Graph (, )][DBLP]


  11. KEPE - a motif frequently superimposed on sumoylation sites in metazoan chromatin proteins and transcription factors. [Citation Graph (, )][DBLP]


  12. A new protein linear motif benchmark for multiple sequence alignment software. [Citation Graph (, )][DBLP]


  13. A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences. [Citation Graph (, )][DBLP]


  14. A structure filter for the Eukaryotic Linear Motif Resource. [Citation Graph (, )][DBLP]


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