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Publications of Author

1. Yong Zhang, Zhihua Zhang, Lunjiang Ling, Baochen Shi, Runsheng Chen
   Conservation analysis of small RNA genes in Escherichia coli. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2004, v:20, n:5, pp:599-603 [Journal]
   
2. Xiangfeng Wang, Hang He, Lei Li, Runsheng Chen, Xing Wang Deng, Songgang Li
   NMPP: a user-customized NimbleGen microarray data processing pipeline. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:23, pp:2955-2957 [Journal]
   
3. Zhuo Zhang, Shiwei Sun, Xiaopeng Zhu, Suhua Chang, Xiaofei Liu, Chungong Yu, Dongbo Bu, Runsheng Chen
   A novel scoring schema for peptide identification by searching protein sequence databases using tandem mass spectrometry data. [Citation Graph (0, 0)][DBLP]
   BMC Bioinformatics, 2006, v:7, n:, pp:222- [Journal]
   
4. Yong Zhang, Shaojuan Li, Geir Skogerbø, Zhihua Zhang, Xiaopeng Zhu, Zefeng Zhang, Shiwei Sun, Hongchao Lu, Baochen Shi, Runsheng Chen
   Phylophenetic properties of metabolic pathway topologies as revealed by global analysis. [Citation Graph (0, 0)][DBLP]
   BMC Bioinformatics, 2006, v:7, n:, pp:252- [Journal]
   
5. Jian Sun, Wen-Yuan Song, Li-Huang Zhu, Runsheng Chen
   Analysis of tRNA Gene Sequences by Neural Network. [Citation Graph (0, 0)][DBLP]
   Journal of Computational Biology, 1995, v:2, n:3, pp:409-416 [Journal]
   
6. Changning Liu, Baoyan Bai, Geir Skogerbø, Lun Cai, Wei Deng, Yong Zhang, Dongbo Bu, Yi Zhao, Runsheng Chen
   NONCODE: an integrated knowledge database of non-coding RNAs. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2005, v:33, n:Database-Issue, pp:112-115 [Journal]
   
7. Tao Wu, Jie Wang, Changning Liu, Yong Zhang, Baochen Shi, Xiaopeng Zhu, Zhihua Zhang, Geir Skogerbø, Lan Chen, Hongchao Lu, Yi Zhao, Runsheng Chen
   NPInter: the noncoding RNAs and protein related biomacromolecules interaction database. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 2006, v:34, n:Database-Issue, pp:150-152 [Journal]
   
8. Jingfen Zhang, Wen Gao, Jinjin Cai, Simin He, Rong Zeng, Runsheng Chen
   Predicting Molecular Formulas of Fragment Ions with Isotope Patterns in Tandem Mass Spectra. [Citation Graph (0, 0)][DBLP]
   IEEE/ACM Trans. Comput. Biology Bioinform., 2005, v:2, n:3, pp:217-230 [Journal]
   
9. 
   A Flexible Stem-Based Local Search Algorithm for Predicting RNA Secondary Structures Including Pseudoknots. [Citation Graph (, )][DBLP]
   
   
10. 
    FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space. [Citation Graph (, )][DBLP]
    
    
11. 
    antiCODE: a natural sense-antisense transcripts database. [Citation Graph (, )][DBLP]