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Michael S. Waterman: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Michael S. Waterman
    Whole Genome Optical Mapping. [Citation Graph (0, 0)][DBLP]
    APBC, 2006, pp:5- [Conf]
  2. Pavel A. Pevzner, Michael S. Waterman
    Matrix Longest Common Subsequence Problem, Duality and Hibert Bases. [Citation Graph (0, 0)][DBLP]
    CPM, 1992, pp:79-89 [Conf]
  3. Pavel A. Pevzner, Michael S. Waterman
    A Fast Filtration Algorithm for the Substring Matching Problem. [Citation Graph (0, 0)][DBLP]
    CPM, 1993, pp:197-214 [Conf]
  4. Michael S. Waterman, Yu Zhang
    Eulerian Path Methods for Multiple Sequence Alignment. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:29- [Conf]
  5. Michael S. Waterman
    Sequence Comparison and Statistical Significance in Molecular Biology (Abstract). [Citation Graph (0, 0)][DBLP]
    ESA, 1993, pp:396- [Conf]
  6. E. T. Chow, J. C. Peterson, Michael S. Waterman, Tim Hunkapiller, B. A. Zimmermann
    A systolic array processor for biological information signal processing. [Citation Graph (0, 0)][DBLP]
    ICS, 1991, pp:216-223 [Conf]
  7. Pavel A. Pevzner, Michael S. Waterman
    Open Combinatorial Problems in Computational Molecular Biology. [Citation Graph (0, 0)][DBLP]
    ISTCS, 1995, pp:158-173 [Conf]
  8. George A. Komatsoulis, Michael S. Waterman
    Chimeric alignment by dynamic programming: algorithm and biological uses. [Citation Graph (0, 0)][DBLP]
    RECOMB, 1997, pp:174-180 [Conf]
  9. Jae Kyu Lee, Vlado Dancík, Michael S. Waterman
    Estimation for restriction sites observed by optical mapping using reversible-jump Markov chain Monte Carlo. [Citation Graph (0, 0)][DBLP]
    RECOMB, 1998, pp:147-152 [Conf]
  10. Lei Li, Jong Hyun Kim, Michael S. Waterman
    Haplotype reconstruction from SNP alignment. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2003, pp:207-216 [Conf]
  11. Pavel A. Pevzner, Haixu Tang, Michael S. Waterman
    A new approach to fragment assembly in DNA sequencing. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2001, pp:256-267 [Conf]
  12. Fengzhu Sun, Gary Benson, Norman Arnheim, Michael S. Waterman
    Pooling strategies for establishing physical genome maps using FISH. [Citation Graph (0, 0)][DBLP]
    RECOMB, 1997, pp:294-299 [Conf]
  13. Mengxiang Tang, Michael S. Waterman, Shibu Yooseph
    Zinc finger gene clusters and tandem gene duplication. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2001, pp:297-304 [Conf]
  14. Anton Valouev, Lei Li, Yu-Chi Liu, David C. Schwartz, Yi Yang, Yu Zhang, Michael S. Waterman
    Alignment of Optical Maps. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2005, pp:489-504 [Conf]
  15. Michael S. Waterman
    Stan Ulam and Computational Biology. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2006, pp:159-159 [Conf]
  16. Kui Zhang, Ting Chen, Michael S. Waterman, Zhaohui S. Qin, Jun S. Liu, Fengzhu Sun
    Dynamic Programming Algorithms for Haplotype Block Partitioning and Tag SNP Selection Using Haplotype Data or Genotype Data. [Citation Graph (0, 0)][DBLP]
    Computational Methods for SNPs and Haplotype Inference, 2002, pp:96-112 [Conf]
  17. Kui Zhang, Fengzhu Sun, Michael S. Waterman, Ting Chen
    Dynamic programming algorithms for haplotype block partitioning: applications to human chromosome 21 haplotype data. [Citation Graph (0, 0)][DBLP]
    RECOMB, 2003, pp:332-340 [Conf]
  18. Pavel A. Pevzner, Michael S. Waterman
    Multiple Filtration and Approximate Pattern Matching. [Citation Graph (0, 0)][DBLP]
    Algorithmica, 1995, v:13, n:1/2, pp:135-154 [Journal]
  19. X. Huang, Michael S. Waterman
    Dynamic programming algorithms for restriction map comparison. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1992, v:8, n:5, pp:511-520 [Journal]
  20. Anton Valouev, Yu Zhang, David C. Schwartz, Michael S. Waterman
    Refinement of optical map assemblies. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:10, pp:1217-1224 [Journal]
  21. Kui Zhang, Zhaohui S. Qin, Ting Chen, Jun S. Liu, Michael S. Waterman, Fengzhu Sun
    HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:1, pp:131-134 [Journal]
  22. William R. Schmitt, Michael S. Waterman
    Linear Trees and RNA Secondary Structure. [Citation Graph (0, 0)][DBLP]
    Discrete Applied Mathematics, 1994, v:51, n:3, pp:317-323 [Journal]
  23. Martin Vingron, Michael S. Waterman
    Alignment Networks and Electrical Networks. [Citation Graph (0, 0)][DBLP]
    Discrete Applied Mathematics, 1996, v:71, n:1-3, pp:297-309 [Journal]
  24. Richard Arratia, D. Martin, Gesine Reinert, Michael S. Waterman
    Poisson Process Approximation for Sequence Repeats and Sequencing by Hybridization. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1996, v:3, n:3, pp:425- [Journal]
  25. Ramana M. Idury, Michael S. Waterman
    A New Algorithm for DNA Sequence Assembly. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1995, v:2, n:2, pp:291-306 [Journal]
  26. Jae Kyu Lee, Vlado Dancík, Michael S. Waterman
    Estimation for Restriction Sites Observed by Optical Mapping Using Reversible-Jump Markov Chain Monte Carlo [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1998, v:5, n:3, pp:505-516 [Journal]
  27. Lei M. Li, Jong Hyun Kim, Michael S. Waterman
    Haplotype Reconstruction from SNP Alignment. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2004, v:11, n:2/3, pp:505-516 [Journal]
  28. Gesine Reinert, Sophie Schbath, Michael S. Waterman
    Probabilistic and Statistical Properties of Words: An Overview. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2000, v:7, n:1-2, pp:1-46 [Journal]
  29. Fengzhu Sun, Gary Benson, Norman Arnheim, Michael S. Waterman
    Pooling Strategies for Establishing Physical Genome Maps Using FISH. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1997, v:4, n:4, pp:467-486 [Journal]
  30. Mengxiang Tang, Michael S. Waterman, Shibu Yooseph
    Zinc Finger Gene Clusters and Tandem Gene Duplication. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2002, v:9, n:2, pp:429-446 [Journal]
  31. Michael S. Waterman, Sorin Istrail, Pavel A. Pevzner
    Selected Papers from RECOMB'97 - Preface. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1997, v:4, n:3, pp:215-216 [Journal]
  32. Yu Zhang, Michael S. Waterman
    An Eulerian Path Approach to Global Multiple Alignment for DNA Sequences. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2003, v:10, n:6, pp:803-819 [Journal]
  33. David J. Lipman, W. John Wilbur, Temple F. Smith, Michael S. Waterman
    On the statistical significance of nucleic acid similarities. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1984, v:12, n:1, pp:215-226 [Journal]
  34. Michael S. Waterman, Temple F. Smith, H. L. Katcher
    Algorithms for restriction map comparisons. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1984, v:12, n:1, pp:237-242 [Journal]
  35. Fei Pan, Chi-Hsien Chiu, Sudip Pulapura, Michael R. Mehan, Juan Nunez-Iglesias, Kangyu Zhang, Kiran Kamath, Michael S. Waterman, Caleb E. Finch, Xianghong Jasmine Zhou
    Gene Aging Nexus: a web database and data mining platform for microarray data on aging. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2007, v:35, n:Database-Issue, pp:756-759 [Journal]
  36. Gesine Reinert, Michael S. Waterman
    On the Length of the Longest Exact Position Match in a Random Sequence. [Citation Graph (0, 0)][DBLP]
    IEEE/ACM Trans. Comput. Biology Bioinform., 2007, v:4, n:1, pp:153-156 [Journal]
  37. Jong Hyun Kim, Michael S. Waterman, Lei M. Li
    Accuracy Assessment of Diploid Consensus Sequences. [Citation Graph (0, 0)][DBLP]
    IEEE/ACM Trans. Comput. Biology Bioinform., 2007, v:4, n:1, pp:88-97 [Journal]

  38. A graph-based approach to systematically reconstruct human transcriptional regulatory modules. [Citation Graph (, )][DBLP]


  39. Systematic discovery of functional modules and context-specific functional annotation of human genome. [Citation Graph (, )][DBLP]


  40. An Integrative Network Approach to Map the Transcriptome to the Phenome. [Citation Graph (, )][DBLP]


  41. HAPLOWSER: a whole-genome haplotype browser for personal genome and metagenome. [Citation Graph (, )][DBLP]


  42. The Seventh Asia Pacific Bioinformatics Conference (APBC2009). [Citation Graph (, )][DBLP]


  43. Integrative missing value estimation for microarray data. [Citation Graph (, )][DBLP]


  44. An integrative modular approach to systematically predict gene-phenotype associations. [Citation Graph (, )][DBLP]


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