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Toshihisa Takagi: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Ken-ichiro Fukuda, Toshihisa Takagi
    A Pathway Editor for Literature-based Knowledge Curation. [Citation Graph (0, 0)][DBLP]
    APBC, 2004, pp:339-344 [Conf]
  2. Shinsuke Dohkan, Asako Koike, Toshihisa Takagi
    Prediction of Protein-Protein Interactions Using Support Vector Machines. [Citation Graph (0, 0)][DBLP]
    BIBE, 2004, pp:576-586 [Conf]
  3. Susumu Goto, Norihiro Sakamoto, Toshihisa Takagi
    Object-Oriented Database with Rule-Based Query Interface for Genomic Computation. [Citation Graph (0, 2)][DBLP]
    DASFAA, 1993, pp:65-72 [Conf]
  4. Toshihisa Takagi, Fumihiro Matsuo, Shouichi Futamura, Kazuo Ushijima
    Implementation of Inferential Relational Database System. [Citation Graph (0, 0)][DBLP]
    FODO, 1985, pp:539-546 [Conf]
  5. Takako Takai-Igarashi, Toshihisa Takagi
    Ontology and functional genomics. [Citation Graph (0, 0)][DBLP]
    German Conference on Bioinformatics, 2001, pp:46- [Conf]
  6. Susumu Goto, Norihiro Sakamoto, Toshihisa Takagi
    A Deductive Object-Oriented Language for Integrated Genome Databaser. [Citation Graph (0, 0)][DBLP]
    HICSS (5), 1994, pp:108-110 [Conf]
  7. Kenji Satou, Emiko Furuichi, Kyoko Takiguchi, Satoru Kuhara, Toshihisa Takagi
    Application of a Deductive Database System PACADE toward Discovery of Clusters of Similar Structures in Proteins. [Citation Graph (0, 0)][DBLP]
    HICSS (5), 1994, pp:160-170 [Conf]
  8. Takahiko Suzuki, Toshihisa Takagi, Satoru Kuhara, Minoru Kanehisa
    Development of an integrated Database for Genome Mapping and Nucleotide Sequences. [Citation Graph (0, 0)][DBLP]
    HICSS (5), 1994, pp:68-76 [Conf]
  9. Yasunori Yamamoto, Toshihisa Takagi
    A Sentence Classification System for Multi Biomedical Literature Summarization. [Citation Graph (0, 0)][DBLP]
    ICDE Workshops, 2005, pp:1163- [Conf]
  10. Neng-Fa Zhou, Toshihisa Takagi, Kazuo Ushijima
    A Matching Tree Oriented Abstract Machine for Prolog. [Citation Graph (0, 0)][DBLP]
    ICLP, 1990, pp:159-173 [Conf]
  11. Yoshihiro Ohta, Yasunori Yamamoto, Tomoko Okazaki, Ikuo Uchiyama, Toshihisa Takagi
    Automatic Construction of Knowledge Base from Biological Papers. [Citation Graph (0, 0)][DBLP]
    ISMB, 1997, pp:218-225 [Conf]
  12. Kenji Satou, Toshihide Ono, Yoshihisa Yamamura, Emiko Furuichi, Satoru Kuhara, Toshihisa Takagi
    Extraction of Substructures of Proteins Essential to their Biological Functions by a Data Mining Technique. [Citation Graph (0, 0)][DBLP]
    ISMB, 1997, pp:254-257 [Conf]
  13. Yasunori Yamamoto, Toshihisa Takagi
    A Practical Partial Parser for Biomedical Literature Summarization. [Citation Graph (0, 0)][DBLP]
    NLUCS, 2004, pp:75-85 [Conf]
  14. Tatsuya Kushida, Toshihisa Takagi, Ken-ichiro Fukuda
    Event Ontology: A Pathway-Centric Ontology for Biological Processes. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2006, pp:152-163 [Conf]
  15. Tatsuhiko Tsunoda, Masao Fukagawa, Toshihisa Takagi
    Time and Memory Efficient Algorithm for Extracting Palindromic and Repetitive Subsequences in Nucleic Acid Sequences. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 1999, pp:202-213 [Conf]
  16. Tetsushi Yada, Yasushi Totoki, Y. Takaeda, Yasubumi Sakaki, Toshihisa Takagi
    DIGIT: A Novel Gene Finding Program by Combining Gene-Finders. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2003, pp:375-387 [Conf]
  17. Hiroko Ao, Yasunori Yamamoto, Toshihisa Takagi
    A Method to Retrieve Papers from MEDLINE: PETER System. [Citation Graph (0, 0)][DBLP]
    TREC, 2003, pp:806-809 [Conf]
  18. Ken-ichiro Fukuda, Toshihisa Takagi
    Knowledge representation of signal transduction pathways. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2001, v:17, n:9, pp:829-837 [Journal]
  19. Asako Koike, Yoshiki Niwa, Toshihisa Takagi
    Automatic extraction of gene/protein biological functions from biomedical text. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:7, pp:1227-1236 [Journal]
  20. Toshihide Ono, Haretsugu Hishigaki, Akira Tanigami, Toshihisa Takagi
    Automated extraction of information on protein-protein interactions from the biological literature. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2001, v:17, n:1, pp:155-161 [Journal]
  21. Natalia V. Poluliakh, Toshihisa Takagi, Kenta Nakai
    MELINA: motif extraction from promoter regions of potentially co-regulated genes. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:3, pp:423-424 [Journal]
  22. Norihiro Sakamoto, Toshihisa Takagi, Yasubumi Sakaki
    Development of the Overlapping Oligonucleotide Database and its application to signal sequence search of the human genome. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1993, v:9, n:4, pp:427-434 [Journal]
  23. Kenji Satou, Emiko Furuichi, Kyoko Takiguchi, Toshihisa Takagi, Satoru Kuhara
    A deductive database system PACADE for analyzing 3-D and secondary structures of protein. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1993, v:9, n:3, pp:259-265 [Journal]
  24. Goro Terai, Toshihisa Takagi
    Predicting rules on organization of cis-regulatory elements, taking the order of elements into account. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:7, pp:1119-1128 [Journal]
  25. Y. Tsukamoto, Kyoko Takiguchi, Kenji Satou, Emiko Furuichi, Toshihisa Takagi, Satoru Kuhara
    Application of a deductive database system to search for topological and similar three-dimensional structures in protein. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1997, v:13, n:2, pp:183-190 [Journal]
  26. T. Tsunoda, Toshihisa Takagi
    Estimating transcription factor bindability on DNA. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1999, v:15, n:7, pp:622-630 [Journal]
  27. Mikio Yoshida, Ken-ichiro Fukuda, Toshihisa Takagi
    PNAD-CSS: a workbench for constructing a protein name abbreviation dictionary. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2000, v:16, n:2, pp:169-175 [Journal]
  28. Asako Koike, Toshihisa Takagi
    PRIME: automatically extracted PRotein Interactions and Molecular Information databas. [Citation Graph (0, 0)][DBLP]
    In Silico Biology, 2004, v:5, n:, pp:- [Journal]
  29. Ken-ichiro Fukuda, Yuki Yamagata, Toshihisa Takagi
    FREX: A query interface for biological processes with hierarchical and recursive structures. [Citation Graph (0, 0)][DBLP]
    In Silico Biology, 2003, v:4, n:, pp:- [Journal]
  30. Yutaka Suzuki, Riu Yamashita, Matsuyuki Shirota, Yuta Sakakibara, Joe Chiba, Junko Mizushima-Sugano, Alexander E. Kel, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Toshihisa Takagi, Kenta Nakai, Sumio Sugano
    Large-scale collection and characterization of promoters of human and mouse genes. [Citation Graph (0, 0)][DBLP]
    In Silico Biology, 2004, v:4, n:, pp:- [Journal]
  31. Takako Takai-Igarashi, Toshihisa Takagi, Holger Michael, Edgar Wingender
    Preface - Third "Ontology Workshop on Ontology and Genomes". [Citation Graph (0, 0)][DBLP]
    In Silico Biology, 2004, v:5, n:, pp:- [Journal]
  32. Takako Takai-Igarashi, Toshihisa Takagi, Edgar Wingender
    Preface. [Citation Graph (0, 0)][DBLP]
    In Silico Biology, 2003, v:4, n:, pp:- [Journal]
  33. Yasunori Yamamoto, Toshihisa Takagi
    Biomedical knowledge navigation by literature clustering. [Citation Graph (0, 0)][DBLP]
    Journal of Biomedical Informatics, 2007, v:40, n:2, pp:114-130 [Journal]
  34. Mika Hirakawa, Toshihiro Tanaka, Yoichi Hashimoto, Masako Kuroda, Toshihisa Takagi, Yusuke Nakamura
    JSNP: a database of common gene variations in the Japanese population. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2002, v:30, n:1, pp:158-162 [Journal]
  35. Satoru Kuhara, Fumihiro Matsuo, Shouichi Futamura, A. Fujita, Takeshi Shinohara, Toshihisa Takagi, Yasubumi Sakaki
    GENAS: a database system for nucleic acid sequence analysis. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1984, v:12, n:1, pp:89-99 [Journal]
  36. Kikuya Kato, Riu Yamashita, Ryo Matoba, Morito Monden, Shinzaburo Noguchi, Toshihisa Takagi, Kenta Nakai
    Cancer gene expression database (CGED): a database for gene expression profiling with accompanying clinical information of human cancer tissues. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Database-Issue, pp:533-536 [Journal]

  37. Natural Language Query Processing for Life Science Knowledge - Position Paper. [Citation Graph (, )][DBLP]


  38. Coimagination Method: Communication Support System with Collected Images and Its Evaluation via Memory Task. [Citation Graph (, )][DBLP]


  39. On-line discovery of temporal-difference networks. [Citation Graph (, )][DBLP]


  40. Open brain simulator estimating internal state of human through external observation towards human biomechatronics. [Citation Graph (, )][DBLP]


  41. Authoring Computer-Understandable Semantic Summaries of Life Science Articles Optimized for Knowledge Mining. [Citation Graph (, )][DBLP]


  42. Reconstruction of highly heterogeneous gene-content evolution across the three domains of life. [Citation Graph (, )][DBLP]


  43. Figure Classification in Biomedical Literature towards Figure Mining. [Citation Graph (, )][DBLP]


  44. Collection of Disease Networks by Hybrid Curation Method and the Application for Pathway Analysis. [Citation Graph (, )][DBLP]


  45. Classifying Biomedical Figures Using Combination of Bag of Keypoints and Bag of Words. [Citation Graph (, )][DBLP]


  46. Figure classification in biomedical literature to elucidate disease mechanisms, based on pathways. [Citation Graph (, )][DBLP]


  47. Ligand-binding site prediction of proteins based on known fragment-fragment interactions. [Citation Graph (, )][DBLP]


  48. OReFiL: an online resource finder for life sciences. [Citation Graph (, )][DBLP]


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