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Publications of Author

1. Claudine Chaouiya, Elisabeth Remy, Paul Ruet, Denis Thieffry
   Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets. [Citation Graph (0, 0)][DBLP]
   ICATPN, 2004, pp:137-156 [Conf]
   
2. Elisabeth Remy, Brigitte Mossé, Claudine Chaouiya, Denis Thieffry
   A description of dynamical graphs associated to elementary regulatory circuits. [Citation Graph (0, 0)][DBLP]
   ECCB, 2003, pp:172-178 [Conf]
   
3. E. Simão, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya
   Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.Coli. [Citation Graph (0, 0)][DBLP]
   ECCB/JBI, 2005, pp:196- [Conf]
   
4. Adrien Fauré, Aurélien Naldi, Claudine Chaouiya, Denis Thieffry
   Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2006, pp:124-131 [Conf]
   
5. Claudine Chaouiya, Elisabeth Remy, Brigitte Mossé, Denis Thieffry
   Qualitative Analysis of Regulatory Graphs: A Computational Tool Based on a Discrete Formal Framework. [Citation Graph (0, 0)][DBLP]
   POSTA, 2003, pp:119-126 [Conf]
   
6. L. Mendoza, Denis Thieffry, E. R. Alvarez-Buylla
   Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 1999, v:15, n:7, pp:593-606 [Journal]
   
7. David A. Rosenblueth, Denis Thieffry, Araceli M. Huerta, Heladia Salgado, Julio Collado-Vides
   Syntactic recognition of regulatory regions in Escherichia coli. [Citation Graph (0, 0)][DBLP]
   Computer Applications in the Biosciences, 1996, v:12, n:5, pp:415-422 [Journal]
   
8. Denis Thieffry, Heladia Salgado, Araceli M. Huerta, Julio Collado-Vides
   Prediction of transcriptional regulatory sites in the complete genome sequence of Escherichia coli K-12. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 1998, v:14, n:5, pp:391-400 [Journal]
   
9. Araceli M. Huerta, Heladia Salgado, Denis Thieffry, Julio Collado-Vides
   RegulonDB: a database on transcriptional regulation in Escherichia coli. [Citation Graph (0, 0)][DBLP]
   Nucleic Acids Research, 1998, v:26, n:1, pp:55-59 [Journal]
   
10. Claudine Chaouiya, Elisabeth Remy, Denis Thieffry
    Qualitative Petri Net Modelling of Genetic Networks. [Citation Graph (0, 0)][DBLP]
    , 2006, v:, n:, pp:95-112 [Journal]
    
11. Elisabeth Remy, Paul Ruet, Luis Eduardo Mendoza, Denis Thieffry, Claudine Chaouiya
    From Logical Regulatory Graphs to Standard Petri Nets: Dynamical Roles and Functionality of Feedback Circuits. [Citation Graph (0, 0)][DBLP]
    , 2006, v:, n:, pp:56-72 [Journal]
    
12. Aurélien Naldi, Denis Thieffry, Claudine Chaouiya
    Decision Diagrams for the Representation and Analysis of Logical Models of Genetic Networks. [Citation Graph (0, 0)][DBLP]
    CMSB, 2007, pp:233-247 [Conf]
    
13. 
    A Reduction of Logical Regulatory Graphs Preserving Essential Dynamical Properties. [Citation Graph (, )][DBLP]
    
    
14. 
    Logical modelling of the role of the Hh pathway in the patterning of the Drosophila wing disc. [Citation Graph (, )][DBLP]
    
    
15. 
    Dynamical roles of biological regulatory circuits. [Citation Graph (, )][DBLP]
    
    
16. 
    CoCAS: a ChIP-on-chip analysis suite. [Citation Graph (, )][DBLP]
    
    
17. 
    Logical modelling and analysis of the budding yeast cell cycle. [Citation Graph (, )][DBLP]