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Jun S. Liu: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Jason Cong, Tianming Kong, Faming Liang, Jun S. Liu, Wing Hung Wong, Dongmin Xu
    Dynamic weighting Monte Carlo for constrained floorplan designs in mixed signal application. [Citation Graph (0, 0)][DBLP]
    ASP-DAC, 2000, pp:277-282 [Conf]
  2. Jason Cong, Tianming Kong, Dongmin Xu, Faming Liang, Jun S. Liu, Wing Hung Wong
    Relaxed Simulated Tempering for VLSI Floorplan Designs. [Citation Graph (0, 0)][DBLP]
    ASP-DAC, 1999, pp:13-16 [Conf]
  3. Xin Lu, Wen Zhang, Zhaohui S. Qin, Jun S. Liu
    Statistical Resynchronization and Detection of Periodic Transcripts. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:394-395 [Conf]
  4. Charles E. Lawrence, Stephen F. Altschul, John C. Wootton, Mark S. Boguski, Andrew F. Neuwald, Jun S. Liu
    A Gibbs Sampler for the Detection of Subtle Motifs in Multiple Sequences. [Citation Graph (0, 0)][DBLP]
    HICSS (5), 1994, pp:245-254 [Conf]
  5. Jun Zhu, Jun S. Liu, Charles E. Lawrence
    Bayesian Adaptive Alignment and Inference. [Citation Graph (0, 0)][DBLP]
    ISMB, 1997, pp:358-368 [Conf]
  6. X. Liu, Douglas L. Brutlag, Jun S. Liu
    BioProspector: Discovering Conserved DNA Motifs in Upstream Regulatory Regions of Co-Expressed Genes. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2001, pp:127-138 [Conf]
  7. Tianhua Niu, Xin Lu, Hosung Kang, Zhaohui S. Qin, Jun S. Liu
    Haplotype Inference and Its Application in Linkage Disequilibrium Mapping. [Citation Graph (0, 0)][DBLP]
    Computational Methods for SNPs and Haplotype Inference, 2002, pp:48-61 [Conf]
  8. Kui Zhang, Ting Chen, Michael S. Waterman, Zhaohui S. Qin, Jun S. Liu, Fengzhu Sun
    Dynamic Programming Algorithms for Haplotype Block Partitioning and Tag SNP Selection Using Haplotype Data or Genotype Data. [Citation Graph (0, 0)][DBLP]
    Computational Methods for SNPs and Haplotype Inference, 2002, pp:96-112 [Conf]
  9. Dongsheng Che, Shane T. Jensen, Liming Cai, Jun S. Liu
    BEST: Binding-site Estimation Suite of Tools. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:12, pp:2909-2911 [Journal]
  10. Pengyu Hong, X. Shirley Liu, Qing Zhou, Xin Lu, Jun S. Liu, Wing Hung Wong
    A boosting approach for motif modeling using ChIP-chip data. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:11, pp:2636-2643 [Journal]
  11. Shane T. Jensen, Jun S. Liu
    BioOptimizer: a Bayesian scoring function approach to motif discovery. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:10, pp:1557-1564 [Journal]
  12. Shane T. Jensen, Lei Shen, Jun S. Liu
    Combining phylogenetic motif discovery and motif clustering to predict co-regulated genes. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:20, pp:3832-3839 [Journal]
  13. Jun S. Liu, Charles E. Lawrence
    Bayesian inference on biopolymer models. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1999, v:15, n:1, pp:38-52 [Journal]
  14. Kui Zhang, Zhaohui S. Qin, Ting Chen, Jun S. Liu, Michael S. Waterman, Fengzhu Sun
    HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:1, pp:131-134 [Journal]
  15. Wenxuan Zhong, Peng Zeng, Ping Ma, Jun S. Liu, Yu Zhu
    RSIR: regularized sliced inverse regression for motif discovery. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:22, pp:4169-4175 [Journal]
  16. Qing Zhou, Jun S. Liu
    Modeling within-motif dependence for transcription factor binding site predictions. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:6, pp:909-916 [Journal]
  17. Jun Zhu, Jun S. Liu, Charles E. Lawrence
    Bayesian adaptive sequence alignment algorithms. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1998, v:14, n:1, pp:25-39 [Journal]
  18. Erin M. Conlon, Joon J. Song, Jun S. Liu
    Bayesian models for pooling microarray studies with multiple sources of replications. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2006, v:7, n:, pp:247- [Journal]
  19. Andrew F. Neuwald, Jun S. Liu
    Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2004, v:5, n:, pp:157- [Journal]
  20. Xuegong Zhang, Xin Lu, Qian Shi, Xiu-qin Xu, Hon-chiu E. Leung, Lyndsay N. Harris, James D. Iglehart, Alexander Miron, Jun S. Liu, Wing Hung Wong
    Recursive SVM feature selection and sample classification for mass-spectrometry and microarray data. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2006, v:7, n:, pp:197- [Journal]
  21. Haiyan Huang, Ming-Chih J. Kao, Xianghong Zhou, Jun S. Liu, Wing Hung Wong
    Determination of Local Statistical Significance of Patterns in Markov Sequences with Application to Promoter Element Identification. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2004, v:11, n:1, pp:1-14 [Journal]
  22. Scott C. Schmidler, Jun S. Liu, Douglas L. Brutlag
    Bayesian Segmentation of Protein Secondary Structure. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 2000, v:7, n:1-2, pp:233-248 [Journal]
  23. Yueyi Liu, Liping Wei, Serafim Batzoglou, Douglas L. Brutlag, Jun S. Liu, X. Shirley Liu
    A suite of web-based programs to search for transcriptional regulatory motifs. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:204-207 [Journal]
  24. Rong Chen, Xiaodong Wang, Jun S. Liu
    Adaptive joint detection and decoding in flat-fading channels via mixture Kalman filtering. [Citation Graph (0, 0)][DBLP]
    IEEE Transactions on Information Theory, 2000, v:46, n:6, pp:2079-2094 [Journal]

  25. Statistial Analysis of nucleosome occupancy and histone modification data. [Citation Graph (, )][DBLP]


  26. Bayesian Biclustering of Microarray Data. [Citation Graph (, )][DBLP]


  27. PFP: A Computational Framework for Phylogenetic Footprinting in Prokaryotic Genomes. [Citation Graph (, )][DBLP]


  28. Bayesian inference of protein-protein interactions from biological literature. [Citation Graph (, )][DBLP]


  29. Tmod: toolbox of motif discovery. [Citation Graph (, )][DBLP]


  30. Statistical power of phylo-HMM for evolutionarily conserved element detection. [Citation Graph (, )][DBLP]


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