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Burkhard Rost: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Burkhard Rost
    Learning from Evolution to Predict Protein Structure. [Citation Graph (0, 0)][DBLP]
    BCEC, 1997, pp:87-101 [Conf]
  2. Burkhard Rost, Chris Sander, Reinhard Schneider
    Evolution and Neural Networks - Protein Secondary Structure Prediction Above 71% Accuracy. [Citation Graph (0, 0)][DBLP]
    HICSS (5), 1994, pp:385-394 [Conf]
  3. Janice I. Glasgow, Burkhard Rost
    ISMB 2002 [Citation Graph (0, 0)][DBLP]
    ISMB, 2002, pp:1-4 [Conf]
  4. H. V. Jagadish, David J. States, Burkhard Rost
    ISMB 2005. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2005, pp:1-2 [Conf]
  5. H. V. Jagadish, David J. States, Burkhard Rost
    ISMB 2005 Organization. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2005, pp:3-6 [Conf]
  6. Rajesh Nair, Burkhard Rost
    Inferring sub-cellular localization through automated lexical analysis. [Citation Graph (0, 0)][DBLP]
    ISMB, 2002, pp:78-86 [Conf]
  7. Sven Mika, Burkhard Rost
    Protein names precisely peeled off free text. [Citation Graph (0, 0)][DBLP]
    ISMB/ECCB (Supplement of Bioinformatics), 2004, pp:241-247 [Conf]
  8. Yanay Ofran, Guy Yachdav, Eyal Mozes, Ta-tsen Soong, Rajesh Nair, Burkhard Rost
    Create and assess protein networks through molecular characteristics of individual proteins. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2006, pp:402-407 [Conf]
  9. Burkhard Rost
    TOPITS: Threading One-Dimensional Predictions Into Three-Dimensional Structures. [Citation Graph (0, 0)][DBLP]
    ISMB, 1995, pp:314-321 [Conf]
  10. Burkhard Rost, Rita Casadio, Piero Fariselli
    Refining Neural Network Predictions for Helical Transmembrane Proteins by Dynamic Programming. [Citation Graph (0, 0)][DBLP]
    ISMB, 1996, pp:192-200 [Conf]
  11. Janice I. Glasgow, Igor Jurisica, Burkhard Rost
    AI and Bioinformatics. [Citation Graph (0, 0)][DBLP]
    AI Magazine, 2004, v:25, n:1, pp:7-8 [Journal]
  12. Rajesh Nair, Burkhard Rost
    Annotating Protein Function through Lexical Analysis. [Citation Graph (0, 0)][DBLP]
    AI Magazine, 2004, v:25, n:1, pp:45-56 [Journal]
  13. Volker A. Eyrich, Marc A. Martí-Renom, Dariusz Przybylski, Mallur S. Madhusudhan, András Fiser, Florencio Pazos, Alfonso Valencia, Andrej Sali, Burkhard Rost
    EVA: continuous automatic evaluation of protein structure prediction servers. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2001, v:17, n:12, pp:1242-1243 [Journal]
  14. Jinfeng Liu, Burkhard Rost
    Target space for structural genomics revisited. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2002, v:18, n:7, pp:922-933 [Journal]
  15. Florencio Pazos, Burkhard Rost, Alfonso Valencia
    A platform for integrating threading results with protein family analyses. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1999, v:15, n:12, pp:1062-1063 [Journal]
  16. Marco Punta, Burkhard Rost
    PROFcon: novel prediction of long-range contacts. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:13, pp:2960-2968 [Journal]
  17. Burkhard Rost, Barry Honig, Alfonso Valencia
    Bioinformatics in structural genomics - Editorial. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2002, v:18, n:7, pp:897- [Journal]
  18. Burkhard Rost, Seán I. O'Donoghue
    Sisyphus and prediction of protein structure. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1997, v:13, n:4, pp:345-356 [Journal]
  19. Burkhard Rost, Chris Sander, Reinhard Schneider
    PHD - an automatic mail server for protein secondary structure prediction. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1994, v:10, n:1, pp:53-60 [Journal]
  20. Avner Schlessinger, Guy Yachdav, Burkhard Rost
    PROFbval: predict flexible and rigid residues in proteins. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:7, pp:891-893 [Journal]
  21. Yanay Ofran, Burkhard Rost
    ISIS: interaction sites identified from sequence. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:2, pp:13-16 [Journal]
  22. Burkhard Rost, Chris Sander
    Exercising Multi-Layered Networks on Protein Secondary Structure. [Citation Graph (0, 0)][DBLP]
    Int. J. Neural Syst., 1992, v:3, n:Supplement, pp:209-220 [Journal]
  23. Phil Carter, Claus A. F. Andersen, Burkhard Rost
    DSSPcont: continuous secondary structure assignments for proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3293-3295 [Journal]
  24. Phil Carter, Jinfeng Liu, Burkhard Rost
    PEP: Predictions for Entire Proteomes. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:1, pp:410-413 [Journal]
  25. Volker A. Eyrich, Burkhard Rost
    META-PP: single interface to crucial prediction servers. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3308-3310 [Journal]
  26. Andrew Kernytsky, Burkhard Rost
    Static benchmarking of membrane helix predictions. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3642-3644 [Journal]
  27. Ingrid Y. Y. Koh, Volker A. Eyrich, Marc A. Martí-Renom, Dariusz Przybylski, Mallur S. Madhusudhan, Narayanan Eswar, Osvaldo Graña, Florencio Pazos, Alfonso Valencia, Andrej Sali, Burkhard Rost
    EVA: evaluation of protein structure prediction servers. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3311-3315 [Journal]
  28. Jinfeng Liu, Burkhard Rost
    NORSp: predictions of long regions without regular secondary structure. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3833-3835 [Journal]
  29. Jinfeng Liu, Burkhard Rost
    CHOP: parsing proteins into structural domains. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:569-571 [Journal]
  30. Sven Mika, Burkhard Rost
    UniqueProt: creating representative protein sequence sets. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3789-3791 [Journal]
  31. Sven Mika, Burkhard Rost
    NLProt: extracting protein names and sequences from papers. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:634-637 [Journal]
  32. Rajesh Nair, Phil Carter, Burkhard Rost
    NLSdb: database of nuclear localization signals. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:1, pp:397-399 [Journal]
  33. Rajesh Nair, Burkhard Rost
    LOC3D: annotate sub-cellular localization for protein structures. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3337-3340 [Journal]
  34. Rajesh Nair, Burkhard Rost
    LOCnet and LOCtarget: sub-cellular localization for structural genomics targets. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:517-521 [Journal]
  35. Burkhard Rost, Jinfeng Liu
    The PredictProtein server. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3300-3304 [Journal]
  36. Burkhard Rost, Guy Yachdav, Jinfeng Liu
    The PredictProtein server. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Web-Server-Issue, pp:321-326 [Journal]
  37. Sven Mika, Burkhard Rost
    NMPdb: Database of Nuclear Matrix Proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Database-Issue, pp:160-163 [Journal]
  38. Osvaldo Graña, Volker A. Eyrich, Florencio Pazos, Burkhard Rost, Alfonso Valencia
    EVAcon: a protein contact prediction evaluation service. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Web-Server-Issue, pp:347-351 [Journal]
  39. Henry R. Bigelow, Burkhard Rost
    PROFtmb: a web server for predicting bacterial transmembrane beta barrel proteins. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Web-Server-Issue, pp:186-188 [Journal]
  40. Avner Schlessinger, Yanay Ofran, Guy Yachdav, Burkhard Rost
    Epitome: database of structure-inferred antigenic epitopes. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Database-Issue, pp:777-780 [Journal]

  41. Comprehensive in silico mutagenesis highlights functionally important residues in proteins. [Citation Graph (, )][DBLP]


  42. Prediction of DNA-binding residues from sequence. [Citation Graph (, )][DBLP]


  43. Natively unstructured regions in proteins identified from contact predictions. [Citation Graph (, )][DBLP]


  44. MetalDetector: a web server for predicting metal-binding sites and disulfide bridges in proteins from sequence. [Citation Graph (, )][DBLP]


  45. Powerful fusion: PSI-BLAST and consensus sequences. [Citation Graph (, )][DBLP]


  46. SNAP predicts effect of mutations on protein function. [Citation Graph (, )][DBLP]


  47. Physical protein-protein interactions predicted from microarrays. [Citation Graph (, )][DBLP]


  48. Protein secondary structure appears to be robust under in silico evolution while protein disorder appears not to be. [Citation Graph (, )][DBLP]


  49. Correlating protein function and stability through the analysis of single amino acid substitutions. [Citation Graph (, )][DBLP]


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