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Tamer Kahveci: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Tamer Kahveci, Venkatakrishnan Ramaswamy, Han Tao, Tao Li
    Approximate Global Alignment of Sequences. [Citation Graph (0, 0)][DBLP]
    BIBE, 2005, pp:81-88 [Conf]
  2. Abhijit Pol, Tamer Kahveci
    Highly Scalable and Accurate Seeds for Subsequence Alignment. [Citation Graph (0, 0)][DBLP]
    BIBE, 2005, pp:27-31 [Conf]
  3. Orhan Çamoglu, Tamer Kahveci, Ambuj K. Singh
    Towards Index-based Similarity Search for Protein Structure Databases. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:148-158 [Conf]
  4. Tamer Kahveci, Ambuj K. Singh
    Genome on Demand: Interactive Substring Searching. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:551-552 [Conf]
  5. Jayendra Venkateswaran, Tamer Kahveci, Orhan Çamoglu
    Finding Data Broadness Via Generalized Nearest Neighbors. [Citation Graph (0, 0)][DBLP]
    EDBT, 2006, pp:645-663 [Conf]
  6. Tamer Kahveci, Ambuj K. Singh
    Variable Length Queries for Time Series Data. [Citation Graph (0, 0)][DBLP]
    ICDE, 2001, pp:273-282 [Conf]
  7. Tamer Kahveci, Ambuj K. Singh
    Fast alignment of large genome databases. [Citation Graph (0, 0)][DBLP]
    ICDE, 2003, pp:768-770 [Conf]
  8. Tamer Kahveci, Christian A. Lang, Ambuj K. Singh
    Joining Massive High-Dimensional Datasets. [Citation Graph (0, 0)][DBLP]
    ICDE, 2003, pp:265-276 [Conf]
  9. Tamer Kahveci, Ambuj K. Singh, Aliekber Gürel
    An Efficient Index Structure for Shift and Scale Invariant Search of Multi-Attribute Time Sequences. [Citation Graph (0, 0)][DBLP]
    ICDE, 2002, pp:266- [Conf]
  10. Orhan Çamoglu, Tamer Kahveci, Ambuj K. Singh
    PSI: indexing protein structures for fast similarity search. [Citation Graph (0, 0)][DBLP]
    ISMB (Supplement of Bioinformatics), 2003, pp:81-83 [Conf]
  11. Yue Li, Tao Li, Tamer Kahveci, José A. B. Fortes
    Workload Characterization of Bioinformatics Applications. [Citation Graph (0, 0)][DBLP]
    MASCOTS, 2005, pp:15-22 [Conf]
  12. Arnab Bhattacharya, Tolga Can, Tamer Kahveci, Ambuj K. Singh, Yuan-Fang Wang
    ProGreSS: Simultaneous Searching of Protein Databases by Sequence and Structure. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2004, pp:264-275 [Conf]
  13. Tamer Kahveci, Ambuj K. Singh
    MAP: Searching Large Genome Databases. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2003, pp:303-314 [Conf]
  14. Xu Zhang, Tamer Kahveci
    A New Approach for Alignment of Multiple Proteins. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2006, pp:339-350 [Conf]
  15. Tamer Kahveci, Ambuj K. Singh, Aliekber Gürel
    Similarity Searching for Multi-Attribute Sequences. [Citation Graph (0, 0)][DBLP]
    SSDBM, 2002, pp:175-0 [Conf]
  16. Tamer Kahveci, Ambuj K. Singh
    Efficient Index Structures for String Databases. [Citation Graph (0, 0)][DBLP]
    VLDB, 2001, pp:351-360 [Conf]
  17. Jayendra Venkateswaran, Deepak Lachwani, Tamer Kahveci, Christopher M. Jermaine
    Reference-based Indexing of Sequence Databases. [Citation Graph (0, 0)][DBLP]
    VLDB, 2006, pp:906-917 [Conf]
  18. Tamer Kahveci, Vebjorn Ljosa, Ambuj K. Singh
    Speeding up whole-genome alignment by indexing frequency vectors. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2004, v:20, n:13, pp:2122-2134 [Journal]
  19. Jun Liu, Jaaved Mohammed, James Carter, Sanjay Ranka, Tamer Kahveci, Michael Baudis
    Distance-based clustering of CGH data. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:16, pp:1971-1978 [Journal]
  20. Xuehui Li, Tamer Kahveci
    A Novel algorithm for identifying low-complexity regions in a protein sequence. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:24, pp:2980-2987 [Journal]
  21. Xu Zhang, Tamer Kahveci
    QOMA: quasi-optimal multiple alignment of protein sequences. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:2, pp:162-168 [Journal]
  22. Jun Liu, Sanjay Ranka, Tamer Kahveci
    Markers improve clustering of CGH data. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:4, pp:450-457 [Journal]
  23. Tamer Kahveci, Ambuj K. Singh
    Progressive Searching of Biological Sequences. [Citation Graph (0, 0)][DBLP]
    IEEE Data Eng. Bull., 2004, v:27, n:3, pp:32-39 [Journal]
  24. Orhan Çamoglu, Tamer Kahveci, Ambuj K. Singh
    Index-based Similarity Search for Protein Structure Databases. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2004, v:2, n:1, pp:99-126 [Journal]
  25. Tamer Kahveci, Ambuj K. Singh
    Optimizing Similarity Search for Arbitrary Length Time Series Queries. [Citation Graph (0, 0)][DBLP]
    IEEE Trans. Knowl. Data Eng., 2004, v:16, n:4, pp:418-433 [Journal]
  26. Jayendra Venkateswaran, Tamer Kahveci, Christopher M. Jermaine, Deepak Lachwani
    Reference-based indexing for metric spaces with costly distance measures. [Citation Graph (0, 0)][DBLP]
    VLDB J., 2008, v:0, n:, pp:- [Journal]

  27. QOMA2: Optimizing the alignment of many sequences. [Citation Graph (, )][DBLP]


  28. Finding Dynamic Modules of Biological Regulatory Networks. [Citation Graph (, )][DBLP]


  29. Quality-Based Similarity Search for Biological Sequence Databases. [Citation Graph (, )][DBLP]


  30. Surrogate ranking for very expensive similarity queries. [Citation Graph (, )][DBLP]


  31. Classification and feature selection algorithms for multi-class CGH data. [Citation Graph (, )][DBLP]


  32. An Iterative Algorithm for Metabolic Network-Based Drug Target Identification. [Citation Graph (, )][DBLP]


  33. Mining Metabolic Networks for Optimal Drug Targets. [Citation Graph (, )][DBLP]


  34. SubMAP: Aligning Metabolic Pathways with Subnetwork Mappings. [Citation Graph (, )][DBLP]


  35. A novel genome-scale repeat finder geared towards transposons. [Citation Graph (, )][DBLP]


  36. Inferring progression models for CGH data. [Citation Graph (, )][DBLP]


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