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Ümit V. Çatalyürek: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Shannon Hastings, Tahsin M. Kurç, Stephen Langella, Ümit V. Çatalyürek, Tony Pan, Joel H. Saltz
    Image Processing or the Grid: A Toolkit or Building Grid-enabled Image Processing Applications. [Citation Graph (0, 0)][DBLP]
    CCGRID, 2003, pp:36-43 [Conf]
  2. Gaurav Khanna 0002, Nagavijayalakshmi Vydyanathan, Tahsin M. Kurç, Ümit V. Çatalyürek, Pete Wyckoff, Joel H. Saltz, P. Sadayappan
    A hypergraph partitioning based approach for scheduling of tasks with batch-shared I/O. [Citation Graph (0, 0)][DBLP]
    CCGRID, 2005, pp:792-799 [Conf]
  3. Li Weng, Ümit V. Çatalyürek, Tahsin M. Kurç, Gagan Agrawal, Joel H. Saltz
    Servicing range queries on multidimensional datasets with partial replicas. [Citation Graph (0, 0)][DBLP]
    CCGRID, 2005, pp:726-733 [Conf]
  4. Xi Zhang, Tony Pan, Ümit V. Çatalyürek, Tahsin M. Kurç, Joel H. Saltz
    Serving queries to multi-resolution datasets on disk-based storage clusters. [Citation Graph (0, 0)][DBLP]
    CCGRID, 2004, pp:490-498 [Conf]
  5. Tulio Tavares, George Teodoro, Tahsin M. Kurç, Renato Ferreira, Dorgival Olavo Guedes Neto, Wagner Meira Jr., Ümit V. Çatalyürek, Shannon Hastings, Scott Oster, Stephen Langella, Joel H. Saltz
    An Efficient and Reliable Scientific Workflow System. [Citation Graph (0, 0)][DBLP]
    CCGRID, 2007, pp:445-452 [Conf]
  6. Stephen Langella, Shannon Hastings, Scott Oster, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz
    A distributed data management middleware for data-driven application systems. [Citation Graph (0, 0)][DBLP]
    CLUSTER, 2004, pp:267-276 [Conf]
  7. Sivaramakrishnan Narayanan, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz
    Servicing Seismic and Oil Reservoir Simulation Data Through Grid Data Services. [Citation Graph (0, 0)][DBLP]
    DMG, 2005, pp:129-142 [Conf]
  8. Erik G. Boman, Doruk Bozdag, Ümit V. Çatalyürek, Assefaw Hadish Gebremedhin, Fredrik Manne
    A Scalable Parallel Graph Coloring Algorithm for Distributed Memory Computers. [Citation Graph (0, 0)][DBLP]
    Euro-Par, 2005, pp:241-251 [Conf]
  9. Sivaramakrishnan Narayanan, Ümit V. Çatalyürek, Tahsin M. Kurç, Xi Zhang, Joel H. Saltz
    Applying Database Support for Large Scale Data Driven Science in Distributed Environments. [Citation Graph (0, 0)][DBLP]
    GRID, 2003, pp:141-148 [Conf]
  10. Nagavijayalakshmi Vydyanathan, Gaurav Khanna 0002, Tahsin M. Kurç, Ümit V. Çatalyürek, Pete Wyckoff, Joel H. Saltz, P. Sadayappan
    Use of PVFS for Efficient Execution of Jobs with Pipeline-Shared I/O. [Citation Graph (0, 0)][DBLP]
    GRID, 2004, pp:235-242 [Conf]
  11. Doruk Bozdag, Ümit V. Çatalyürek, Assefaw Hadish Gebremedhin, Fredrik Manne, Erik G. Boman, Füsun Özgüner
    A Parallel Distance-2 Graph Coloring Algorithm for Distributed Memory Computers. [Citation Graph (0, 0)][DBLP]
    HPCC, 2005, pp:796-806 [Conf]
  12. Pavan Balaji, Jiesheng Wu, Tahsin M. Kurç, Ümit V. Çatalyürek, Dhabaleswar K. Panda, Joel H. Saltz
    Impact of High Performance Sockets on Data Intensive Applications. [Citation Graph (0, 0)][DBLP]
    HPDC, 2003, pp:24-33 [Conf]
  13. Li Weng, Gagan Agrawal, Ümit V. Çatalyürek, Tahsin M. Kurç, Sivaramakrishnan Narayanan, Joel H. Saltz
    An Approach for Automatic Data Virtualization. [Citation Graph (0, 0)][DBLP]
    HPDC, 2004, pp:24-33 [Conf]
  14. Xi Zhang, Tahsin M. Kurç, Tony Pan, Ümit V. Çatalyürek, Sivaramakrishnan Narayanan, Pete Wyckoff, Joel H. Saltz
    Strategies for Using Additional Resources in Parallel Hash-Based Join Algorithms. [Citation Graph (0, 0)][DBLP]
    HPDC, 2004, pp:4-13 [Conf]
  15. Manish Parashar, Hector Klie, Ümit V. Çatalyürek, Tahsin M. Kurç, Vincent Matossian, Joel H. Saltz, Mary F. Wheeler
    Application of Grid-Enabled Technologies for Solving Optimization Problems in Data-Driven Reservoir Studies. [Citation Graph (0, 0)][DBLP]
    International Conference on Computational Science, 2004, pp:805-812 [Conf]
  16. Manish Parashar, Vincent Matossian, Wolfgang Bangerth, Hector Klie, Benjamin Rutt, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz, Mary F. Wheeler
    Towards Dynamic Data-Driven Optimization of Oil Well Placement. [Citation Graph (0, 0)][DBLP]
    International Conference on Computational Science (2), 2005, pp:656-663 [Conf]
  17. Joel H. Saltz, Ümit V. Çatalyürek, Tahsin M. Kurç, Mike Gray, Shannon Hastings, Stephen Langella, Sivaramakrishnan Narayanan, Ryan Martino, Steven Bryant, Malgorzata Peszynska, Mary F. Wheeler, Alan Sussman, Michael D. Beynon, Christian Hansen, Don Stredney, Dennis Sessanna
    Driving Scientific Applications by Data in Distributed Environments. [Citation Graph (0, 0)][DBLP]
    International Conference on Computational Science, 2003, pp:355-364 [Conf]
  18. Doruk Bozdag, Füsun Özgüner, Eylem Ekici, Ümit V. Çatalyürek
    A Task Duplication Based Scheduling Algorithm Using Partial Schedules. [Citation Graph (0, 0)][DBLP]
    ICPP, 2005, pp:630-637 [Conf]
  19. Sivaramakrishnan Narayanan, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz
    On Creating Efficient Object-relational Views of Scientific Datasets. [Citation Graph (0, 0)][DBLP]
    ICPP, 2006, pp:551-558 [Conf]
  20. Nagavijayalakshmi Vydyanathan, Sriram Krishnamoorthy, Gerald Sabin, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz
    An Integrated Approach for Processor Allocation and Scheduling of Mixed-Parallel Applications. [Citation Graph (0, 0)][DBLP]
    ICPP, 2006, pp:443-450 [Conf]
  21. Li Weng, Ümit V. Çatalyürek, Tahsin M. Kurç, Gagan Agrawal, Joel H. Saltz
    Using Space and Attribute Partitioned Partial Replicas for Data Subsetting and Aggregation Queries. [Citation Graph (0, 0)][DBLP]
    ICPP, 2006, pp:271-280 [Conf]
  22. Michael D. Beynon, Alan Sussman, Ümit V. Çatalyürek, Tahsin M. Kurç, Joel H. Saltz
    Performance Optimization for Data Intensive Grid Applications. [Citation Graph (0, 0)][DBLP]
    Active Middleware Services, 2001, pp:97-105 [Conf]
  23. Michael D. Beynon, Tahsin M. Kurç, Ümit V. Çatalyürek, Alan Sussman, Joel H. Saltz
    Efficient Manipulation of Large Datasets on Heterogeneous Storage Systems. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2002, pp:- [Conf]
  24. Ümit V. Çatalyürek, Cevdet Aykanat
    A Fine-Grain Hypergraph Model for 2D Decomposition of Sparse Matrices. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2001, pp:118- [Conf]
  25. Ümit V. Çatalyürek, Eric Stahlberg, Renato Ferreira, Tahsin M. Kurç, Joel H. Saltz
    Improving Performance of Multiple Sequence Alignment Analysis in Multi-Client Environments. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2002, pp:- [Conf]
  26. Sriram Krishnamoorthy, Ümit V. Çatalyürek, Jarek Nieplocha, Atanas Rountev, P. Sadayappan
    An extensible global address space framework with decoupled task and data abstractions. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2006, pp:- [Conf]
  27. Karen D. Devine, Erik G. Boman, R. T. Heaphy, Rob H. Bisseling, Ümit V. Çatalyürek
    Parallel hypergraph partitioning for scientific computing. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2006, pp:- [Conf]
  28. Doruk Bozdag, Ümit V. Çatalyürek, Füsun Özgüner
    A task duplication based bottom-up scheduling algorithm for heterogeneous environments. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2006, pp:- [Conf]
  29. Sriram Krishnamoorthy, Ümit V. Çatalyürek, Jarek Nieplocha, P. Sadayappan
    An approach to locality-conscious load balancing and transparent memory hierarchy management with a global-address-space parallel programming model. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2006, pp:- [Conf]
  30. Ümit V. Çatalyürek, Cevdet Aykanat
    Decomposing Irregularly Sparse Matrices for Parallel Matrix-Vector Multiplication. [Citation Graph (0, 0)][DBLP]
    IRREGULAR, 1996, pp:75-86 [Conf]
  31. Gaurav Khanna 0002, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz
    A Data Locality Aware Online Scheduling Approach for I/O-Intensive Jobs with File Sharing. [Citation Graph (0, 0)][DBLP]
    JSSPP, 2006, pp:141-160 [Conf]
  32. Li Weng, Gagan Agrawal, Ümit V. Çatalyürek, Joel H. Saltz
    Supporting SQL-3 Aggregations on Grid-Based Data Repositories. [Citation Graph (0, 0)][DBLP]
    LCPC, 2004, pp:283-298 [Conf]
  33. Ali Pinar, Ümit V. Çatalyürek, Cevdet Aykanat, Mustafa Pinar
    Decomposing Linear Programs for Parallel Solution. [Citation Graph (0, 0)][DBLP]
    PARA, 1995, pp:473-482 [Conf]
  34. Ümit V. Çatalyürek, Shannon Hastings, Kun Huang, Vijay S. Kumar, Tahsin M. Kurç, Stephen Langella, Sivaramakrishnan Narayanan, Scott Oster, Tony Pan, Benjamin Rutt, Xi Zhang, Joel H. Saltz
    Supporting Large Scale Medical and Scientific Datasets. [Citation Graph (0, 0)][DBLP]
    PARCO, 2005, pp:3-14 [Conf]
  35. Duygu Ucar, Sitaram Asur, Ümit V. Çatalyürek, Srinivasan Parthasarathy
    Improving Functional Modularity in Protein-Protein Interactions Graphs Using Hub-Induced Subgraphs. [Citation Graph (0, 0)][DBLP]
    PKDD, 2006, pp:371-382 [Conf]
  36. Chialin Chang, Tahsin M. Kurç, Alan Sussman, Ümit V. Çatalyürek, Joel H. Saltz
    A Hypergraph-Based Workload Partitioning Strategy for Parallel Data Aggregation. [Citation Graph (0, 0)][DBLP]
    PPSC, 2001, pp:- [Conf]
  37. Ümit V. Çatalyürek, Mike Gray, Tahsin M. Kurç, Joel H. Saltz, Eric Stahlberg, Renato Ferreira
    A Component-based Implementation of Multiple Sequence Alignment. [Citation Graph (0, 0)][DBLP]
    SAC, 2003, pp:122-126 [Conf]
  38. Shannon Hastings, Stephen Langella, Scott Oster, Tahsin M. Kurç, Tony Pan, Ümit V. Çatalyürek, Dan Janies, Joel H. Saltz
    Grid-based management of biomedical data using an XML-based distributed data management system. [Citation Graph (0, 0)][DBLP]
    SAC, 2005, pp:105-109 [Conf]
  39. Ümit V. Çatalyürek, Cevdet Aykanat
    A hypergraph-partitioning approach for coarse-grain decomposition. [Citation Graph (0, 0)][DBLP]
    SC, 2001, pp:28- [Conf]
  40. Tahsin M. Kurç, Feng Lee, Gagan Agrawal, Ümit V. Çatalyürek, Renato Ferreira, Joel H. Saltz
    Optimizing Reduction Computations In a Distributed Environment. [Citation Graph (0, 0)][DBLP]
    SC, 2003, pp:9- [Conf]
  41. Matthew Spencer, Renato Ferreira, Michael D. Beynon, Tahsin M. Kurç, Ümit V. Çatalyürek, Alan Sussman, Joel H. Saltz
    Executing multiple pipelined data analysis operations in the grid. [Citation Graph (0, 0)][DBLP]
    SC, 2002, pp:1-18 [Conf]
  42. Andy Yoo, Edmond Chow, Keith W. Henderson, Will McLendon III, Bruce Hendrickson, Ümit V. Çatalyürek
    A Scalable Distributed Parallel Breadth-First Search Algorithm on BlueGene/L. [Citation Graph (0, 0)][DBLP]
    SC, 2005, pp:25- [Conf]
  43. Sriram Krishnamoorthy, Ümit V. Çatalyürek, Jarek Nieplocha, Atanas Rountev, P. Sadayappan
    Data management and query - Hypergraph partitioning for automatic memory hierarchy management. [Citation Graph (0, 0)][DBLP]
    SC, 2006, pp:98- [Conf]
  44. Vijay S. Kumar, Benjamin Rutt, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz, Sunny Chow, Stephan Lamont, Maryann E. Martone
    Imaging and visual analysis - Large image correction and warping in a cluster environment. [Citation Graph (0, 0)][DBLP]
    SC, 2006, pp:79- [Conf]
  45. Tahsin M. Kurç, Ümit V. Çatalyürek, Chialin Chang, Alan Sussman, Joel H. Saltz
    Visualization of Large Data Sets with the Active Data Repository. [Citation Graph (0, 0)][DBLP]
    IEEE Computer Graphics and Applications, 2001, v:21, n:4, pp:24-33 [Journal]
  46. Tahsin M. Kurç, Ümit V. Çatalyürek, Xi Zhang, Joel H. Saltz, Ryan Martino, Mary F. Wheeler, Malgorzata Peszynska, Alan Sussman, Christian Hansen, Mrinal K. Sen, Roustam Seifoullaev, Paul L. Stoffa, Carlos Torres-Verdin, Manish Parashar
    A simulation and data analysis system for large-scale, data-driven oil reservoir simulation studies. [Citation Graph (0, 0)][DBLP]
    Concurrency - Practice and Experience, 2005, v:17, n:11, pp:1441-1467 [Journal]
  47. Manish Parashar, Hector Klie, Ümit V. Çatalyürek, Tahsin M. Kurç, Wolfgang Bangerth, Vincent Matossian, Joel H. Saltz, Mary F. Wheeler
    Application of Grid-enabled technologies for solving optimization problems in data-driven reservoir studies. [Citation Graph (0, 0)][DBLP]
    Future Generation Comp. Syst., 2005, v:21, n:1, pp:19-26 [Journal]
  48. Michael D. Beynon, Chialin Chang, Ümit V. Çatalyürek, Tahsin M. Kurç, Alan Sussman, Henrique Andrade, Renato Ferreira, Joel H. Saltz
    Processing large-scale multi-dimensional data in parallel and distributed environments. [Citation Graph (0, 0)][DBLP]
    Parallel Computing, 2002, v:28, n:5, pp:827-859 [Journal]
  49. Michael D. Beynon, Tahsin M. Kurç, Ümit V. Çatalyürek, Chialin Chang, Alan Sussman, Joel H. Saltz
    Distributed processing of very large datasets with DataCutter. [Citation Graph (0, 0)][DBLP]
    Parallel Computing, 2001, v:27, n:11, pp:1457-1478 [Journal]
  50. Sivaramakrishnan Narayanan, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz
    Database Support for Data-Driven Scientific Applications in the Grid. [Citation Graph (0, 0)][DBLP]
    Parallel Processing Letters, 2003, v:13, n:2, pp:245-271 [Journal]
  51. Shannon Hastings, Matheus Ribeiro, Stephen Langella, Scott Oster, Ümit V. Çatalyürek, Tony Pan, Kun Huang, Renato Ferreira, Joel H. Saltz, Tahsin M. Kurç
    XML database support for distributed execution of data-intensive scientific workflows. [Citation Graph (0, 0)][DBLP]
    SIGMOD Record, 2005, v:34, n:3, pp:50-55 [Journal]
  52. Ümit V. Çatalyürek, Michael D. Beynon, Chialin Chang, Tahsin M. Kurç, Alan Sussman, Joel H. Saltz
    The virtual microscope. [Citation Graph (0, 0)][DBLP]
    IEEE Transactions on Information Technology in Biomedicine, 2003, v:7, n:4, pp:230-248 [Journal]
  53. Ümit V. Çatalyürek, Cevdet Aykanat
    Hypergraph-Partitioning-Based Decomposition for Parallel Sparse-Matrix Vector Multiplication. [Citation Graph (0, 0)][DBLP]
    IEEE Trans. Parallel Distrib. Syst., 1999, v:10, n:7, pp:673-693 [Journal]
  54. Nagavijayalakshmi Vydyanathan, Sriram Krishnamoorthy, Gerald Sabin, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz
    Locality Conscious Processor Allocation and Scheduling for Mixed Parallel Applications. [Citation Graph (0, 0)][DBLP]
    CLUSTER, 2006, pp:- [Conf]
  55. Timothy D. R. Hartley, Ümit V. Çatalyürek, Füsun Özgüner, Andy Yoo, Scott Kohn, Keith W. Henderson
    MSSG: A Framework for Massive-Scale Semantic Graphs. [Citation Graph (0, 0)][DBLP]
    CLUSTER, 2006, pp:- [Conf]
  56. Nagavijayalakshmi Vydyanathan, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz
    Toward Optimizing Latency Under Throughput Constraints for Application Workflows on Clusters. [Citation Graph (0, 0)][DBLP]
    Euro-Par, 2007, pp:173-183 [Conf]
  57. Gaurav Khanna 0002, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz
    Scheduling File Transfers for Data-Intensive Jobs on Heterogeneous Clusters. [Citation Graph (0, 0)][DBLP]
    Euro-Par, 2007, pp:214-223 [Conf]
  58. Tahsin M. Kurç, Xi Zhang, Manish Parashar, Hector Klie, Mary F. Wheeler, Ümit V. Çatalyürek, Joel H. Saltz
    Dynamic Data-Driven Systems Approach for Simulation Based Optimizations. [Citation Graph (0, 0)][DBLP]
    International Conference on Computational Science (1), 2007, pp:1213-1221 [Conf]
  59. Ümit V. Çatalyürek, Erik G. Boman, Karen D. Devine, Doruk Bozdag, Robert Heaphy, Lee Ann Riesen
    Hypergraph-based Dynamic Load Balancing for Adaptive Scientific Computations. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2007, pp:1-11 [Conf]
  60. Sriram Krishnamoorthy, Ümit V. Çatalyürek, Jarek Nieplocha, Atanas Rountev, P. Sadayappan
    A global address space framework for locality aware scheduling of block-sparse computations. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2007, pp:1-8 [Conf]
  61. Bhupesh Bansal, Ümit V. Çatalyürek, Jacqueline Chame, Chun Chen, Ewa Deelman, Yolanda Gil, Mary W. Hall, Vijay Kumar, Tahsin M. Kurç, Kristina Lerman, Aiichiro Nakano, Yoon-Ju Lee Nelson, Joel H. Saltz, Ashish Sharma, Priya Vashishta
    Intelligent Optimization of Parallel and Distributed Applications. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2007, pp:1-6 [Conf]

  62. Distributed Out-of-Core Preprocessing of Very Large Microscopy Images for Efficient Querying. [Citation Graph (, )][DBLP]


  63. Performance vs. accuracy trade-offs for large-scale image analysis applications. [Citation Graph (, )][DBLP]


  64. Coordinating the use of GPU and CPU for improving performance of compute intensive applications. [Citation Graph (, )][DBLP]


  65. Investigating the use of GPU-accelerated nodes for SAR image formation. [Citation Graph (, )][DBLP]


  66. Optimizing multiple queries on scientific datasets with partial replicas. [Citation Graph (, )][DBLP]


  67. Task Scheduling and File Replication for Data-Intensive Jobs with Batch-shared I/O. [Citation Graph (, )][DBLP]


  68. Multi-hop path splitting and multi-pathing optimizations for data transfers over shared wide-area networks using gridFTP. [Citation Graph (, )][DBLP]


  69. Run-time optimizations for replicated dataflows on heterogeneous environments. [Citation Graph (, )][DBLP]


  70. High-performance signal processing on emerging many-core architectures using cuda. [Citation Graph (, )][DBLP]


  71. A Duplication Based Algorithm for Optimizing Latency Under Throughput Constraints for Streaming Workflows. [Citation Graph (, )][DBLP]


  72. Biomedical image analysis on a cooperative cluster of GPUs and multicores. [Citation Graph (, )][DBLP]


  73. Translational research design templates, Grid computing, and HPC. [Citation Graph (, )][DBLP]


  74. A dynamic scheduling approach for coordinated wide-area data transfers using GridFTP. [Citation Graph (, )][DBLP]


  75. A component-based framework for the Cell Broadband Engine. [Citation Graph (, )][DBLP]


  76. Parallel short sequence mapping for high throughput genome sequencing. [Citation Graph (, )][DBLP]


  77. On the Scalability of Hypergraph Models for Sparse Matrix Partitioning. [Citation Graph (, )][DBLP]


  78. Parallel materialization of large ABoxes. [Citation Graph (, )][DBLP]


  79. Using overlays for efficient data transfer over shared wide-area networks. [Citation Graph (, )][DBLP]


  80. Pathological Image Analysis Using the GPU: Stroma Classification for Neuroblastoma. [Citation Graph (, )][DBLP]


  81. A Biclustering Method to Discover Co-regulated Genes Using Diverse Gene Expression Datasets. [Citation Graph (, )][DBLP]


  82. A Comprehensive Analysis Workflow for Genome-Wide Screening Data from ChIP-Sequencing Experiments. [Citation Graph (, )][DBLP]


  83. Texture classification using nonlinear color quantization: Application to histopathological image analysis. [Citation Graph (, )][DBLP]


  84. e-Science, caGrid, and Translational Biomedical Research. [Citation Graph (, )][DBLP]


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